A citation-based method for searching scientific literature

David Deamer, Mark Akeson, Daniel Branton. Nat Biotechnol 2016
Times Cited: 363







List of co-cited articles
822 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Characterization of individual polynucleotide molecules using a membrane channel.
J J Kasianowicz, E Brandin, D Branton, D W Deamer. Proc Natl Acad Sci U S A 1996
23

The potential and challenges of nanopore sequencing.
Daniel Branton, David W Deamer, Andre Marziali, Hagan Bayley, Steven A Benner, Thomas Butler, Massimiliano Di Ventra, Slaven Garaj, Andrew Hibbs, Xiaohua Huang,[...]. Nat Biotechnol 2008
18

Nanopore Sensing.
Wenqing Shi, Alicia K Friedman, Lane A Baker. Anal Chem 2017
180
16

Solid-state nanopores.
Cees Dekker. Nat Nanotechnol 2007
15

Electrical recognition of the twenty proteinogenic amino acids using an aerolysin nanopore.
Hadjer Ouldali, Kumar Sarthak, Tobias Ensslen, Fabien Piguet, Philippe Manivet, Juan Pelta, Jan C Behrends, Aleksei Aksimentiev, Abdelghani Oukhaled. Nat Biotechnol 2020
124
15

Real-time shape approximation and fingerprinting of single proteins using a nanopore.
Erik C Yusko, Brandon R Bruhn, Olivia M Eggenberger, Jared Houghtaling, Ryan C Rollings, Nathan C Walsh, Santoshi Nandivada, Mariya Pindrus, Adam R Hall, David Sept,[...]. Nat Nanotechnol 2017
208
13

A complete bacterial genome assembled de novo using only nanopore sequencing data.
Nicholas J Loman, Joshua Quick, Jared T Simpson. Nat Methods 2015
595
12

Highly parallel direct RNA sequencing on an array of nanopores.
Daniel R Garalde, Elizabeth A Snell, Daniel Jachimowicz, Botond Sipos, Joseph H Lloyd, Mark Bruce, Nadia Pantic, Tigist Admassu, Phillip James, Anthony Warland,[...]. Nat Methods 2018
391
12

Reading DNA at single-nucleotide resolution with a mutant MspA nanopore and phi29 DNA polymerase.
Elizabeth A Manrao, Ian M Derrington, Andrew H Laszlo, Kyle W Langford, Matthew K Hopper, Nathaniel Gillgren, Mikhail Pavlenok, Michael Niederweis, Jens H Gundlach. Nat Biotechnol 2012
479
12

Paving the way to single-molecule protein sequencing.
Laura Restrepo-Pérez, Chirlmin Joo, Cees Dekker. Nat Nanotechnol 2018
124
12

Controlling protein translocation through nanopores with bio-inspired fluid walls.
Erik C Yusko, Jay M Johnson, Sheereen Majd, Panchika Prangkio, Ryan C Rollings, Jiali Li, Jerry Yang, Michael Mayer. Nat Nanotechnol 2011
388
12

The Oxford Nanopore MinION: delivery of nanopore sequencing to the genomics community.
Miten Jain, Hugh E Olsen, Benedict Paten, Mark Akeson. Genome Biol 2016
482
11

Real-time, portable genome sequencing for Ebola surveillance.
Joshua Quick, Nicholas J Loman, Sophie Duraffour, Jared T Simpson, Ettore Severi, Lauren Cowley, Joseph Akoi Bore, Raymond Koundouno, Gytis Dudas, Amy Mikhail,[...]. Nature 2016
649
11

Nanopore sequencing and assembly of a human genome with ultra-long reads.
Miten Jain, Sergey Koren, Karen H Miga, Josh Quick, Arthur C Rand, Thomas A Sasani, John R Tyson, Andrew D Beggs, Alexander T Dilthey, Ian T Fiddes,[...]. Nat Biotechnol 2018
728
11

Automated forward and reverse ratcheting of DNA in a nanopore at 5-Å precision.
Gerald M Cherf, Kate R Lieberman, Hytham Rashid, Christopher E Lam, Kevin Karplus, Mark Akeson. Nat Biotechnol 2012
363
11

Single-molecule DNA detection with an engineered MspA protein nanopore.
Tom Z Butler, Mikhail Pavlenok, Ian M Derrington, Michael Niederweis, Jens H Gundlach. Proc Natl Acad Sci U S A 2008
257
10

Comparing Current Noise in Biological and Solid-State Nanopores.
Alessio Fragasso, Sonja Schmid, Cees Dekker. ACS Nano 2020
45
22

Ion-beam sculpting at nanometre length scales.
J Li, D Stein, C McMullan, D Branton, M J Aziz, J A Golovchenko. Nature 2001
833
10

Unfoldase-mediated protein translocation through an α-hemolysin nanopore.
Jeff Nivala, Douglas B Marks, Mark Akeson. Nat Biotechnol 2013
185
9


Identification of single nucleotides in MoS2 nanopores.
Jiandong Feng, Ke Liu, Roman D Bulushev, Sergey Khlybov, Dumitru Dumcenco, Andras Kis, Aleksandra Radenovic. Nat Nanotechnol 2015
219
9

Label-Free Detection of Post-translational Modifications with a Nanopore.
Laura Restrepo-Pérez, Chun Heung Wong, Giovanni Maglia, Cees Dekker, Chirlmin Joo. Nano Lett 2019
39
23

Structure of staphylococcal alpha-hemolysin, a heptameric transmembrane pore.
L Song, M R Hobaugh, C Shustak, S Cheley, H Bayley, J E Gouaux. Science 1996
9

Continuous base identification for single-molecule nanopore DNA sequencing.
James Clarke, Hai-Chen Wu, Lakmal Jayasinghe, Alpesh Patel, Stuart Reid, Hagan Bayley. Nat Nanotechnol 2009
914
9

Fast translocation of proteins through solid state nanopores.
Calin Plesa, Stefan W Kowalczyk, Ruben Zinsmeester, Alexander Y Grosberg, Yitzhak Rabin, Cees Dekker. Nano Lett 2013
211
9

Nanopore sensors for nucleic acid analysis.
Bala Murali Venkatesan, Rashid Bashir. Nat Nanotechnol 2011
686
9

Rapid electronic detection of probe-specific microRNAs using thin nanopore sensors.
Meni Wanunu, Tali Dadosh, Vishva Ray, Jingmin Jin, Larry McReynolds, Marija Drndić. Nat Nanotechnol 2010
413
9

Nanopores: A journey towards DNA sequencing.
Meni Wanunu. Phys Life Rev 2012
315
9

Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation.
Sergey Koren, Brian P Walenz, Konstantin Berlin, Jason R Miller, Nicholas H Bergman, Adam M Phillippy. Genome Res 2017
8

Single-molecule nanopore enzymology.
Kherim Willems, Veerle Van Meervelt, Carsten Wloka, Giovanni Maglia. Philos Trans R Soc Lond B Biol Sci 2017
43
18

Single-nucleotide discrimination in immobilized DNA oligonucleotides with a biological nanopore.
David Stoddart, Andrew J Heron, Ellina Mikhailova, Giovanni Maglia, Hagan Bayley. Proc Natl Acad Sci U S A 2009
258
8

Label-Free and Real-Time Detection of Protein Ubiquitination with a Biological Nanopore.
Carsten Wloka, Veerle Van Meervelt, Dewi van Gelder, Natasha Danda, Nienke Jager, Chris P Williams, Giovanni Maglia. ACS Nano 2017
54
14

Identification of single amino acid differences in uniformly charged homopolymeric peptides with aerolysin nanopore.
Fabien Piguet, Hadjer Ouldali, Manuela Pastoriza-Gallego, Philippe Manivet, Juan Pelta, Abdelghani Oukhaled. Nat Commun 2018
113
8


Voltage-driven DNA translocations through a nanopore.
A Meller, L Nivon, D Branton. Phys Rev Lett 2001
493
8

Nanopore analytics: sensing of single molecules.
Stefan Howorka, Zuzanna Siwy. Chem Soc Rev 2009
687
8

Single-molecule protein sensing in a nanopore: a tutorial.
Nitinun Varongchayakul, Jiaxi Song, Amit Meller, Mark W Grinstaff. Chem Soc Rev 2018
94
8


Single molecule multiplexed nanopore protein screening in human serum using aptamer modified DNA carriers.
Jasmine Y Y Sze, Aleksandar P Ivanov, Anthony E G Cass, Joshua B Edel. Nat Commun 2017
93
8


Label-Free Optical Detection of DNA Translocations through Plasmonic Nanopores.
Daniel V Verschueren, Sergii Pud, Xin Shi, Lorenzo De Angelis, L Kuipers, Cees Dekker. ACS Nano 2019
49
16

Oxford Nanopore MinION Sequencing and Genome Assembly.
Hengyun Lu, Francesca Giordano, Zemin Ning. Genomics Proteomics Bioinformatics 2016
283
8

Fabrication of solid-state nanopores with single-nanometre precision.
A J Storm, J H Chen, X S Ling, H W Zandbergen, C Dekker. Nat Mater 2003
647
8

Detecting DNA cytosine methylation using nanopore sequencing.
Jared T Simpson, Rachael E Workman, P C Zuzarte, Matei David, L J Dursi, Winston Timp. Nat Methods 2017
342
7

Real-time DNA sequencing from single polymerase molecules.
John Eid, Adrian Fehr, Jeremy Gray, Khai Luong, John Lyle, Geoff Otto, Paul Peluso, David Rank, Primo Baybayan, Brad Bettman,[...]. Science 2009
7

Single-molecule site-specific detection of protein phosphorylation with a nanopore.
Christian B Rosen, David Rodriguez-Larrea, Hagan Bayley. Nat Biotechnol 2014
133
7

Decoding long nanopore sequencing reads of natural DNA.
Andrew H Laszlo, Ian M Derrington, Brian C Ross, Henry Brinkerhoff, Andrew Adey, Ian C Nova, Jonathan M Craig, Kyle W Langford, Jenny Mae Samson, Riza Daza,[...]. Nat Biotechnol 2014
222
7

The structure of a mycobacterial outer-membrane channel.
Michael Faller, Michael Niederweis, Georg E Schulz. Science 2004
221
7

Discrimination among protein variants using an unfoldase-coupled nanopore.
Jeff Nivala, Logan Mulroney, Gabriel Li, Jacob Schreiber, Mark Akeson. ACS Nano 2014
66
10

Direct electrical quantification of glucose and asparagine from bodily fluids using nanopores.
Nicole Stéphanie Galenkamp, Misha Soskine, Jos Hermans, Carsten Wloka, Giovanni Maglia. Nat Commun 2018
48
14


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.