A citation-based method for searching scientific literature

Dustin C Hancks, Haig H Kazazian. Mob DNA 2016
Times Cited: 275







List of co-cited articles
1077 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Initial sequencing and analysis of the human genome.
E S Lander, L M Linton, B Birren, C Nusbaum, M C Zody, J Baldwin, K Devon, K Dewar, M Doyle, W FitzHugh,[...]. Nature 2001
39

Hot L1s account for the bulk of retrotransposition in the human population.
Brook Brouha, Joshua Schustak, Richard M Badge, Sheila Lutz-Prigge, Alexander H Farley, John V Moran, Haig H Kazazian. Proc Natl Acad Sci U S A 2003
659
29

The impact of retrotransposons on human genome evolution.
Richard Cordaux, Mark A Batzer. Nat Rev Genet 2009
950
22

Restricting retrotransposons: a review.
John L Goodier. Mob DNA 2016
189
20


LINE-1 retrotransposition activity in human genomes.
Christine R Beck, Pamela Collier, Catriona Macfarlane, Maika Malig, Jeffrey M Kidd, Evan E Eichler, Richard M Badge, John V Moran. Cell 2010
367
18

The Mobile Element Locator Tool (MELT): population-scale mobile element discovery and biology.
Eugene J Gardner, Vincent K Lam, Daniel N Harris, Nelson T Chuang, Emma C Scott, W Stephen Pittard, Ryan E Mills, Scott E Devine. Genome Res 2017
109
18


LINE-1 elements in structural variation and disease.
Christine R Beck, José Luis Garcia-Perez, Richard M Badge, John V Moran. Annu Rev Genomics Hum Genet 2011
323
17

LINE-mediated retrotransposition of marked Alu sequences.
Marie Dewannieux, Cécile Esnault, Thierry Heidmann. Nat Genet 2003
683
17

Mobile DNA in Health and Disease.
Haig H Kazazian, John V Moran. N Engl J Med 2017
140
17

Regulatory evolution of innate immunity through co-option of endogenous retroviruses.
Edward B Chuong, Nels C Elde, Cédric Feschotte. Science 2016
367
17

Which transposable elements are active in the human genome?
Ryan E Mills, E Andrew Bennett, Rebecca C Iskow, Scott E Devine. Trends Genet 2007
282
16

Haemophilia A resulting from de novo insertion of L1 sequences represents a novel mechanism for mutation in man.
H H Kazazian, C Wong, H Youssoufian, A F Scott, D G Phillips, S E Antonarakis. Nature 1988
648
16

L1 drives IFN in senescent cells and promotes age-associated inflammation.
Marco De Cecco, Takahiro Ito, Anna P Petrashen, Amy E Elias, Nicholas J Skvir, Steven W Criscione, Alberto Caligiana, Greta Brocculi, Emily M Adney, Jef D Boeke,[...]. Nature 2019
280
16

Landscape of somatic retrotransposition in human cancers.
Eunjung Lee, Rebecca Iskow, Lixing Yang, Omer Gokcumen, Psalm Haseley, Lovelace J Luquette, Jens G Lohr, Christopher C Harris, Li Ding, Richard K Wilson,[...]. Science 2012
458
16

L1 retrotransposition in human neural progenitor cells.
Nicole G Coufal, José L Garcia-Perez, Grace E Peng, Gene W Yeo, Yangling Mu, Michael T Lovci, Maria Morell, K Sue O'Shea, John V Moran, Fred H Gage. Nature 2009
527
15

High frequency retrotransposition in cultured mammalian cells.
J V Moran, S E Holmes, T P Naas, R J DeBerardinis, J D Boeke, H H Kazazian. Cell 1996
737
15

An integrated map of structural variation in 2,504 human genomes.
Peter H Sudmant, Tobias Rausch, Eugene J Gardner, Robert E Handsaker, Alexej Abyzov, John Huddleston, Yan Zhang, Kai Ye, Goo Jun, Markus Hsi-Yang Fritz,[...]. Nature 2015
999
15

Regulatory activities of transposable elements: from conflicts to benefits.
Edward B Chuong, Nels C Elde, Cédric Feschotte. Nat Rev Genet 2017
494
15

Transposable elements in cancer.
Kathleen H Burns. Nat Rev Cancer 2017
175
15

Mobile DNA in cancer. Extensive transduction of nonrepetitive DNA mediated by L1 retrotransposition in cancer genomes.
Jose M C Tubio, Yilong Li, Young Seok Ju, Inigo Martincorena, Susanna L Cooke, Marta Tojo, Gunes Gundem, Christodoulos P Pipinikas, Jorge Zamora, Keiran Raine,[...]. Science 2014
221
14

Somatic retrotransposition alters the genetic landscape of the human brain.
J Kenneth Baillie, Mark W Barnett, Kyle R Upton, Daniel J Gerhardt, Todd A Richmond, Fioravante De Sapio, Paul M Brennan, Patrizia Rizzu, Sarah Smith, Mark Fell,[...]. Nature 2011
441
14

An evolutionary arms race between KRAB zinc-finger genes ZNF91/93 and SVA/L1 retrotransposons.
Frank M J Jacobs, David Greenberg, Ngan Nguyen, Maximilian Haeussler, Adam D Ewing, Sol Katzman, Benedict Paten, Sofie R Salama, David Haussler. Nature 2014
234
14

Somatic mosaicism in neuronal precursor cells mediated by L1 retrotransposition.
Alysson R Muotri, Vi T Chu, Maria C N Marchetto, Wei Deng, John V Moran, Fred H Gage. Nature 2005
603
13

Ten things you should know about transposable elements.
Guillaume Bourque, Kathleen H Burns, Mary Gehring, Vera Gorbunova, Andrei Seluanov, Molly Hammell, Michaël Imbeault, Zsuzsanna Izsvák, Henry L Levin, Todd S Macfarlan,[...]. Genome Biol 2018
246
13

Transposable elements in human genetic disease.
Lindsay M Payer, Kathleen H Burns. Nat Rev Genet 2019
69
18

Active human retrotransposons: variation and disease.
Dustin C Hancks, Haig H Kazazian. Curr Opin Genet Dev 2012
373
12

Ubiquitous L1 mosaicism in hippocampal neurons.
Kyle R Upton, Daniel J Gerhardt, J Samuel Jesuadian, Sandra R Richardson, Francisco J Sánchez-Luque, Gabriela O Bodea, Adam D Ewing, Carmen Salvador-Palomeque, Marjo S van der Knaap, Paul M Brennan,[...]. Cell 2015
186
12

Human L1 element target-primed reverse transcription in vitro.
Gregory J Cost, Qinghua Feng, Alain Jacquier, Jef D Boeke. EMBO J 2002
346
12

Somatic retrotransposition in human cancer revealed by whole-genome and exome sequencing.
Elena Helman, Michael S Lawrence, Chip Stewart, Carrie Sougnez, Gad Getz, Matthew Meyerson. Genome Res 2014
131
12

Widespread contribution of transposable elements to the innovation of gene regulatory networks.
Vasavi Sundaram, Yong Cheng, Zhihai Ma, Daofeng Li, Xiaoyun Xing, Peter Edge, Michael P Snyder, Ting Wang. Genome Res 2014
202
12

LINE-1 Evasion of Epigenetic Repression in Humans.
Francisco J Sanchez-Luque, Marie-Jeanne H C Kempen, Patricia Gerdes, Dulce B Vargas-Landin, Sandra R Richardson, Robin-Lee Troskie, J Samuel Jesuadian, Seth W Cheetham, Patricia E Carreira, Carmen Salvador-Palomeque,[...]. Mol Cell 2019
44
27

Primate-specific ORF0 contributes to retrotransposon-mediated diversity.
Ahmet M Denli, Iñigo Narvaiza, Bilal E Kerman, Monique Pena, Christopher Benner, Maria C N Marchetto, Jolene K Diedrich, Aaron Aslanian, Jiao Ma, James J Moresco,[...]. Cell 2015
111
11

The Influence of LINE-1 and SINE Retrotransposons on Mammalian Genomes.
Sandra R Richardson, Aurélien J Doucet, Huira C Kopera, John B Moldovan, José Luis Garcia-Perez, John V Moran. Microbiol Spectr 2015
133
11

Retrotransposition of marked SVA elements by human L1s in cultured cells.
Dustin C Hancks, John L Goodier, Prabhat K Mandal, Ling E Cheung, Haig H Kazazian. Hum Mol Genet 2011
133
11

Single-neuron sequencing analysis of L1 retrotransposition and somatic mutation in the human brain.
Gilad D Evrony, Xuyu Cai, Eunjung Lee, L Benjamin Hills, Princess C Elhosary, Hillel S Lehmann, J J Parker, Kutay D Atabay, Edward C Gilmore, Annapurna Poduri,[...]. Cell 2012
331
11

Mobile elements create structural variation: analysis of a complete human genome.
Jinchuan Xing, Yuhua Zhang, Kyudong Han, Abdel Halim Salem, Shurjo K Sen, Chad D Huff, Qiong Zhou, Ewen F Kirkness, Samuel Levy, Mark A Batzer,[...]. Genome Res 2009
200
11


LINE1 Derepression in Aged Wild-Type and SIRT6-Deficient Mice Drives Inflammation.
Matthew Simon, Michael Van Meter, Julia Ablaeva, Zhonghe Ke, Raul S Gonzalez, Taketo Taguchi, Marco De Cecco, Katerina I Leonova, Valeria Kogan, Stephen L Helfand,[...]. Cell Metab 2019
103
11

KAP1 controls endogenous retroviruses in embryonic stem cells.
Helen M Rowe, Johan Jakobsson, Daniel Mesnard, Jacques Rougemont, Séverine Reynard, Tugce Aktas, Pierre V Maillard, Hillary Layard-Liesching, Sonia Verp, Julien Marquis,[...]. Nature 2010
454
11

The Sequence Alignment/Map format and SAMtools.
Heng Li, Bob Handsaker, Alec Wysoker, Tim Fennell, Jue Ruan, Nils Homer, Gabor Marth, Goncalo Abecasis, Richard Durbin. Bioinformatics 2009
10

Genome-wide de novo L1 Retrotransposition Connects Endonuclease Activity with Replication.
Diane A Flasch, Ángela Macia, Laura Sánchez, Mats Ljungman, Sara R Heras, José L García-Pérez, Thomas E Wilson, John V Moran. Cell 2019
43
23

The majority of primate-specific regulatory sequences are derived from transposable elements.
Pierre-Étienne Jacques, Justin Jeyakani, Guillaume Bourque. PLoS Genet 2013
171
10


SVA elements: a hominid-specific retroposon family.
Hui Wang, Jinchuan Xing, Deepak Grover, Dale J Hedges, Kyudong Han, Jerilyn A Walker, Mark A Batzer. J Mol Biol 2005
216
10

KRAB zinc-finger proteins contribute to the evolution of gene regulatory networks.
Michaël Imbeault, Pierre-Yves Helleboid, Didier Trono. Nature 2017
191
10

Many human L1 elements are capable of retrotransposition.
D M Sassaman, B A Dombroski, J V Moran, M L Kimberland, T P Naas, R J DeBerardinis, A Gabriel, G D Swergold, H H Kazazian. Nat Genet 1997
339
9


The non-autonomous retrotransposon SVA is trans-mobilized by the human LINE-1 protein machinery.
Julija Raiz, Annette Damert, Sergiu Chira, Ulrike Held, Sabine Klawitter, Matthias Hamdorf, Johannes Löwer, Wolf H Strätling, Roswitha Löwer, Gerald G Schumann. Nucleic Acids Res 2012
132
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.