A citation-based method for searching scientific literature

M S Huh, D Ivanochko, L E Hashem, M Curtin, M Delorme, E Goodall, K Yan, D J Picketts. Cell Death Dis 2016
Times Cited: 42







List of co-cited articles
748 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Suppression of the alternative lengthening of telomere pathway by the chromatin remodelling factor ATRX.
David Clynes, Clare Jelinska, Barbara Xella, Helena Ayyub, Caroline Scott, Matthew Mitson, Stephen Taylor, Douglas R Higgs, Richard J Gibbons. Nat Commun 2015
140
40

Distinct factors control histone variant H3.3 localization at specific genomic regions.
Aaron D Goldberg, Laura A Banaszynski, Kyung-Min Noh, Peter W Lewis, Simon J Elsaesser, Sonja Stadler, Scott Dewell, Martin Law, Xingyi Guo, Xuan Li,[...]. Cell 2010
798
38

Daxx is an H3.3-specific histone chaperone and cooperates with ATRX in replication-independent chromatin assembly at telomeres.
Peter W Lewis, Simon J Elsaesser, Kyung-Min Noh, Sonja C Stadler, C David Allis. Proc Natl Acad Sci U S A 2010
503
38

Altered telomeres in tumors with ATRX and DAXX mutations.
Christopher M Heaphy, Roeland F de Wilde, Yuchen Jiao, Alison P Klein, Barish H Edil, Chanjuan Shi, Chetan Bettegowda, Fausto J Rodriguez, Charles G Eberhart, Sachidanand Hebbar,[...]. Science 2011
644
35

ATR-X syndrome protein targets tandem repeats and influences allele-specific expression in a size-dependent manner.
Martin J Law, Karen M Lower, Hsiao P J Voon, Jim R Hughes, David Garrick, Vip Viprakasit, Matthew Mitson, Marco De Gobbi, Marco Marra, Andrew Morris,[...]. Cell 2010
265
35

Alpha thalassemia/mental retardation syndrome X-linked gene product ATRX is required for proper replication restart and cellular resistance to replication stress.
Justin Wai-Chung Leung, Gargi Ghosal, Wenqi Wang, Xi Shen, Jiadong Wang, Lei Li, Junjie Chen. J Biol Chem 2013
57
33

Driver mutations in histone H3.3 and chromatin remodelling genes in paediatric glioblastoma.
Jeremy Schwartzentruber, Andrey Korshunov, Xiao-Yang Liu, David T W Jones, Elke Pfaff, Karine Jacob, Dominik Sturm, Adam M Fontebasso, Dong-Anh Khuong Quang, Martje Tönjes,[...]. Nature 2012
30

Atrx deficiency induces telomere dysfunction, endocrine defects, and reduced life span.
L Ashley Watson, Lauren A Solomon, Jennifer Ruizhe Li, Yan Jiang, Matthew Edwards, Kazuo Shin-ya, Frank Beier, Nathalie G Bérubé. J Clin Invest 2013
62
30

ATRX dysfunction induces replication defects in primary mouse cells.
David Clynes, Clare Jelinska, Barbara Xella, Helena Ayyub, Stephen Taylor, Matthew Mitson, Csanád Z Bachrati, Douglas R Higgs, Richard J Gibbons. PLoS One 2014
55
30

The death-associated protein DAXX is a novel histone chaperone involved in the replication-independent deposition of H3.3.
Pascal Drané, Khalid Ouararhni, Arnaud Depaux, Muhammad Shuaib, Ali Hamiche. Genes Dev 2010
431
28

Loss of ATRX, genome instability, and an altered DNA damage response are hallmarks of the alternative lengthening of telomeres pathway.
Courtney A Lovejoy, Wendi Li, Steven Reisenweber, Supawat Thongthip, Joanne Bruno, Titia de Lange, Saurav De, John H J Petrini, Patricia A Sung, Maria Jasin,[...]. PLoS Genet 2012
352
28

The Daxx/Atrx Complex Protects Tandem Repetitive Elements during DNA Hypomethylation by Promoting H3K9 Trimethylation.
Quanyuan He, Hyeung Kim, Rui Huang, Weisi Lu, Mengfan Tang, Fengtao Shi, Dong Yang, Xiya Zhang, Junjiu Huang, Dan Liu,[...]. Cell Stem Cell 2015
70
26

Compromised genomic integrity impedes muscle growth after Atrx inactivation.
Michael S Huh, Tina Price O'Dea, Dahmane Ouazia, Bruce C McKay, Gianni Parise, Robin J Parks, Michael A Rudnicki, David J Picketts. J Clin Invest 2012
47
26

Histone H3.3 is required for endogenous retroviral element silencing in embryonic stem cells.
Simon J Elsässer, Kyung-Min Noh, Nichole Diaz, C David Allis, Laura A Banaszynski. Nature 2015
190
26

ATRX Promotes DNA Repair Synthesis and Sister Chromatid Exchange during Homologous Recombination.
Szilvia Juhász, Amira Elbakry, Arthur Mathes, Markus Löbrich. Mol Cell 2018
55
26

Alternative lengthening of telomeres renders cancer cells hypersensitive to ATR inhibitors.
Rachel Litman Flynn, Kelli E Cox, Maya Jeitany, Hiroaki Wakimoto, Alysia R Bryll, Neil J Ganem, Francesca Bersani, Jose R Pineda, Mario L Suvà, Cyril H Benes,[...]. Science 2015
255
23

The chromatin-remodeling protein ATRX is critical for neuronal survival during corticogenesis.
Nathalie G Bérubé, Marie Mangelsdorf, Magdalena Jagla, Jackie Vanderluit, David Garrick, Richard J Gibbons, Douglas R Higgs, Ruth S Slack, David J Picketts. J Clin Invest 2005
136
23

ATRX ADD domain links an atypical histone methylation recognition mechanism to human mental-retardation syndrome.
Shigeki Iwase, Bin Xiang, Sharmistha Ghosh, Ting Ren, Peter W Lewis, Jesse C Cochrane, C David Allis, David J Picketts, Dinshaw J Patel, Haitao Li,[...]. Nat Struct Mol Biol 2011
175
21

ATRX interacts with H3.3 in maintaining telomere structural integrity in pluripotent embryonic stem cells.
Lee H Wong, James D McGhie, Marcus Sim, Melissa A Anderson, Soyeon Ahn, Ross D Hannan, Amee J George, Kylie A Morgan, Jeffrey R Mann, K H Andy Choo. Genome Res 2010
265
21

ATRX and DAXX: Mechanisms and Mutations.
Michael A Dyer, Zulekha A Qadeer, David Valle-Garcia, Emily Bernstein. Cold Spring Harb Perspect Med 2017
70
21

ATRX Plays a Key Role in Maintaining Silencing at Interstitial Heterochromatic Loci and Imprinted Genes.
Hsiao P J Voon, Jim R Hughes, Christina Rode, Inti A De La Rosa-Velázquez, Thomas Jenuwein, Robert Feil, Douglas R Higgs, Richard J Gibbons. Cell Rep 2015
89
19

DAXX/ATRX, MEN1, and mTOR pathway genes are frequently altered in pancreatic neuroendocrine tumors.
Yuchen Jiao, Chanjuan Shi, Barish H Edil, Roeland F de Wilde, David S Klimstra, Anirban Maitra, Richard D Schulick, Laura H Tang, Christopher L Wolfgang, Michael A Choti,[...]. Science 2011
19

Atrx promotes heterochromatin formation at retrotransposons.
Dennis Sadic, Katharina Schmidt, Sophia Groh, Ivan Kondofersky, Joachim Ellwart, Christiane Fuchs, Fabian J Theis, Gunnar Schotta. EMBO Rep 2015
68
19

Rapid induction of alternative lengthening of telomeres by depletion of the histone chaperone ASF1.
Roderick J O'Sullivan, Nausica Arnoult, Daniel H Lackner, Liana Oganesian, Candy Haggblom, Armelle Corpet, Genevieve Almouzni, Jan Karlseder. Nat Struct Mol Biol 2014
153
19

ATRX represses alternative lengthening of telomeres.
Christine E Napier, Lily I Huschtscha, Adam Harvey, Kylie Bower, Jane R Noble, Eric A Hendrickson, Roger R Reddel. Oncotarget 2015
86
19

Causes and consequences of replication stress.
Michelle K Zeman, Karlene A Cimprich. Nat Cell Biol 2014
967
19


ATRX loss promotes tumor growth and impairs nonhomologous end joining DNA repair in glioma.
Carl Koschmann, Anda-Alexandra Calinescu, Felipe J Nunez, Alan Mackay, Janet Fazal-Salom, Daniel Thomas, Flor Mendez, Neha Kamran, Marta Dzaman, Lakshman Mulpuri,[...]. Sci Transl Med 2016
127
19

Structural and mechanistic insights into ATRX-dependent and -independent functions of the histone chaperone DAXX.
Dominik Hoelper, Hongda Huang, Aayushi Y Jain, Dinshaw J Patel, Peter W Lewis. Nat Commun 2017
41
19

G-quadruplex DNA drives genomic instability and represents a targetable molecular abnormality in ATRX-deficient malignant glioma.
Yuxiang Wang, Jie Yang, Aaron T Wild, Wei H Wu, Rachna Shah, Carla Danussi, Gregory J Riggins, Kasthuri Kannan, Erik P Sulman, Timothy A Chan,[...]. Nat Commun 2019
60
19

A novel transcription regulatory complex containing death domain-associated protein and the ATR-X syndrome protein.
Jun Tang, Shaobo Wu, Hongtu Liu, Rachael Stratt, Orr G Barak, Ramin Shiekhattar, David J Picketts, Xiaolu Yang. J Biol Chem 2004
134
16

Recurrent somatic structural variations contribute to tumorigenesis in pediatric osteosarcoma.
Xiang Chen, Armita Bahrami, Alberto Pappo, John Easton, James Dalton, Erin Hedlund, David Ellison, Sheila Shurtleff, Gang Wu, Lei Wei,[...]. Cell Rep 2014
375
16

ATRX-mediated chromatin association of histone variant macroH2A1 regulates α-globin expression.
Kajan Ratnakumar, Luis F Duarte, Gary LeRoy, Dan Hasson, Daniel Smeets, Chiara Vardabasso, Clemens Bönisch, Tianying Zeng, Bin Xiang, David Y Zhang,[...]. Genes Dev 2012
84
16

ATRX promotes gene expression by facilitating transcriptional elongation through guanine-rich coding regions.
Michael A Levy, Kristin D Kernohan, Yan Jiang, Nathalie G Bérubé. Hum Mol Genet 2015
44
16

ATRX directs binding of PRC2 to Xist RNA and Polycomb targets.
Kavitha Sarma, Catherine Cifuentes-Rojas, Ayla Ergun, Amanda Del Rosario, Yesu Jeon, Forest White, Ruslan Sadreyev, Jeannie T Lee. Cell 2014
135
16

The ATRX syndrome protein forms a chromatin-remodeling complex with Daxx and localizes in promyelocytic leukemia nuclear bodies.
Yutong Xue, Richard Gibbons, Zhijiang Yan, Dafeng Yang, Tarra L McDowell, Salvatore Sechi, Jun Qin, Sharleen Zhou, Doug Higgs, Weidong Wang. Proc Natl Acad Sci U S A 2003
259
16

Histone H3.1 and H3.3 complexes mediate nucleosome assembly pathways dependent or independent of DNA synthesis.
Hideaki Tagami, Dominique Ray-Gallet, Geneviève Almouzni, Yoshihiro Nakatani. Cell 2004
905
16

Inhibition of PRC2 activity by a gain-of-function H3 mutation found in pediatric glioblastoma.
Peter W Lewis, Manuel M Müller, Matthew S Koletsky, Francisco Cordero, Shu Lin, Laura A Banaszynski, Benjamin A Garcia, Tom W Muir, Oren J Becher, C David Allis. Science 2013
731
16



The chromatin remodelling factor ATRX suppresses R-loops in transcribed telomeric repeats.
Diu Tt Nguyen, Hsiao Phin J Voon, Barbara Xella, Caroline Scott, David Clynes, Christian Babbs, Helena Ayyub, Jon Kerry, Jacqueline A Sharpe, Jackie A Sloane-Stanley,[...]. EMBO Rep 2017
54
16

Defective survival of proliferating Sertoli cells and androgen receptor function in a mouse model of the ATR-X syndrome.
Stefan Bagheri-Fam, Anthony Argentaro, Terje Svingen, Alexander N Combes, Andrew H Sinclair, Peter Koopman, Vincent R Harley. Hum Mol Genet 2011
45
14

The ATRX-ADD domain binds to H3 tail peptides and reads the combined methylation state of K4 and K9.
Arunkumar Dhayalan, Raluca Tamas, Ina Bock, Anna Tattermusch, Emilia Dimitrova, Srikanth Kudithipudi, Sergey Ragozin, Albert Jeltsch. Hum Mol Genet 2011
106
14

Emerging roles of ATRX in cancer.
L Ashley Watson, Hannah Goldberg, Nathalie G Bérubé. Epigenomics 2015
36
16

The DNA damage response: making it safe to play with knives.
Alberto Ciccia, Stephen J Elledge. Mol Cell 2010
14

Functional uncoupling of MCM helicase and DNA polymerase activities activates the ATR-dependent checkpoint.
Tony S Byun, Marcin Pacek, Muh-ching Yee, Johannes C Walter, Karlene A Cimprich. Genes Dev 2005
535
14

Rad51-mediated replication fork reversal is a global response to genotoxic treatments in human cells.
Ralph Zellweger, Damian Dalcher, Karun Mutreja, Matteo Berti, Jonas A Schmid, Raquel Herrador, Alessandro Vindigni, Massimo Lopes. J Cell Biol 2015
345
14

Double-strand break repair-independent role for BRCA2 in blocking stalled replication fork degradation by MRE11.
Katharina Schlacher, Nicole Christ, Nicolas Siaud, Akinori Egashira, Hong Wu, Maria Jasin. Cell 2011
719
14

Rad51 protects nascent DNA from Mre11-dependent degradation and promotes continuous DNA synthesis.
Yoshitami Hashimoto, Arnab Ray Chaudhuri, Massimo Lopes, Vincenzo Costanzo. Nat Struct Mol Biol 2010
323
14

Replication fork reversal in eukaryotes: from dead end to dynamic response.
Kai J Neelsen, Massimo Lopes. Nat Rev Mol Cell Biol 2015
264
14


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.