A citation-based method for searching scientific literature

Olivier Poirot, Youri Timsit. Sci Rep 2016
Times Cited: 16







List of co-cited articles
277 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The structure of the eukaryotic ribosome at 3.0 Å resolution.
Adam Ben-Shem, Nicolas Garreau de Loubresse, Sergey Melnikov, Lasse Jenner, Gulnara Yusupova, Marat Yusupov. Science 2011
742
43


Ribosome biogenesis in the yeast Saccharomyces cerevisiae.
John L Woolford, Susan J Baserga. Genetics 2013
447
31

A new system for naming ribosomal proteins.
Nenad Ban, Roland Beckmann, Jamie H D Cate, Jonathan D Dinman, François Dragon, Steven R Ellis, Denis L J Lafontaine, Lasse Lindahl, Anders Liljas, Jeffrey M Lipton,[...]. Curr Opin Struct Biol 2014
339
31


One core, two shells: bacterial and eukaryotic ribosomes.
Sergey Melnikov, Adam Ben-Shem, Nicolas Garreau de Loubresse, Lasse Jenner, Gulnara Yusupova, Marat Yusupov. Nat Struct Mol Biol 2012
235
31

The structure and function of the eukaryotic ribosome.
Daniel N Wilson, Jamie H Doudna Cate. Cold Spring Harb Perspect Biol 2012
178
31

The role of disordered ribosomal protein extensions in the early steps of eubacterial 50 S ribosomal subunit assembly.
Youri Timsit, Zahir Acosta, Frédéric Allemand, Claude Chiaruttini, Mathias Springer. Int J Mol Sci 2009
33
31

Tracking fluctuation hotspots on the yeast ribosome through the elongation cycle.
Suna P Gulay, Sujal Bista, Amitabh Varshney, Serdal Kirmizialtin, Karissa Y Sanbonmatsu, Jonathan D Dinman. Nucleic Acids Res 2017
11
45

Functions of ribosomal proteins in assembly of eukaryotic ribosomes in vivo.
Jesus de la Cruz, Katrin Karbstein, John L Woolford. Annu Rev Biochem 2015
191
25


Eukaryotic rpL10 drives ribosomal rotation.
Sergey O Sulima, Suna P Gülay, Margarida Anjos, Stephanie Patchett, Arturas Meskauskas, Arlen W Johnson, Jonathan D Dinman. Nucleic Acids Res 2014
45
25

Structural dynamics of the ribosome.
Andrei Korostelev, Dmitri N Ermolenko, Harry F Noller. Curr Opin Chem Biol 2008
104
25

The complete atomic structure of the large ribosomal subunit at 2.4 A resolution.
N Ban, P Nissen, J Hansen, P B Moore, T A Steitz. Science 2000
25



The Protein Data Bank.
H M Berman, J Westbrook, Z Feng, G Gilliland, T N Bhat, H Weissig, I N Shindyalov, P E Bourne. Nucleic Acids Res 2000
25



Nervous-Like Circuits in the Ribosome Facts, Hypotheses and Perspectives.
Youri Timsit, Daniel Bennequin. Int J Mol Sci 2019
4
100

Evolution of ribosomal protein network architectures.
Youri Timsit, Grégoire Sergeant-Perthuis, Daniel Bennequin. Sci Rep 2021
8
50

Structure/function analysis of yeast ribosomal protein L2.
Arturas Meskauskas, Johnathan R Russ, Jonathan D Dinman. Nucleic Acids Res 2008
20
18

Structural insights into ribosome translocation.
Clarence Ling, Dmitri N Ermolenko. Wiley Interdiscip Rev RNA 2016
38
18


Heterogeneous Ribosomes Preferentially Translate Distinct Subpools of mRNAs Genome-wide.
Zhen Shi, Kotaro Fujii, Kyle M Kovary, Naomi R Genuth, Hannes L Röst, Mary N Teruel, Maria Barna. Mol Cell 2017
274
18

The ribosomal peptidyl transferase center: structure, function, evolution, inhibition.
Norbert Polacek, Alexander S Mankin. Crit Rev Biochem Mol Biol 2005
107
18


The ribosome as a hub for protein quality control.
Sebastian Pechmann, Felix Willmund, Judith Frydman. Mol Cell 2013
176
18

Insights into substrate stabilization from snapshots of the peptidyl transferase center of the intact 70S ribosome.
Rebecca M Voorhees, Albert Weixlbaumer, David Loakes, Ann C Kelley, V Ramakrishnan. Nat Struct Mol Biol 2009
252
18

Protein Elongation, Co-translational Folding and Targeting.
Marina V Rodnina, Wolfgang Wintermeyer. J Mol Biol 2016
41
18

Atomic structures of the eukaryotic ribosome.
Sebastian Klinge, Felix Voigts-Hoffmann, Marc Leibundgut, Nenad Ban. Trends Biochem Sci 2012
104
18

Translation regulation via nascent polypeptide-mediated ribosome stalling.
Daniel N Wilson, Stefan Arenz, Roland Beckmann. Curr Opin Struct Biol 2016
89
18

Coexistence of two protein folding states in the crystal structure of ribosomal protein L20.
Youri Timsit, Fréderic Allemand, Claude Chiaruttini, Mathias Springer. EMBO Rep 2006
21
18


How Ribosomes Translate Cancer.
Sergey O Sulima, Isabel J F Hofman, Kim De Keersmaecker, Jonathan D Dinman. Cancer Discov 2017
84
18

Network biology: understanding the cell's functional organization.
Albert-László Barabási, Zoltán N Oltvai. Nat Rev Genet 2004
18



On prokaryotic intelligence: strategies for sensing the environment.
Pedro C Marijuán, Jorge Navarro, Raquel del Moral. Biosystems 2010
34
18

How the living is in the world: An inquiry into the informational choreographies of life.
Pedro C Marijuán, Jorge Navarro, Raquel del Moral. Prog Biophys Mol Biol 2015
14
21

Dominant Rio1 kinase/ATPase catalytic mutant induces trapping of late pre-40S biogenesis factors in 80S-like ribosomes.
Sébastien Ferreira-Cerca, Irene Kiburu, Emma Thomson, Nicole LaRonde, Ed Hurt. Nucleic Acids Res 2014
54
12

Cytoplasmic recycling of 60S preribosomal factors depends on the AAA protein Drg1.
Brigitte Pertschy, Cosmin Saveanu, Gertrude Zisser, Alice Lebreton, Martin Tengg, Alain Jacquier, Eva Liebminger, Berthold Nobis, Lisa Kappel, Ida van der Klei,[...]. Mol Cell Biol 2007
73
12

90S pre-ribosomes include the 35S pre-rRNA, the U3 snoRNP, and 40S subunit processing factors but predominantly lack 60S synthesis factors.
Paola Grandi, Vladimir Rybin, Jochen Bassler, Elisabeth Petfalski, Daniela Strauss, Martina Marzioch, Thorsten Schäfer, Bernhard Kuster, Herbert Tschochner, David Tollervey,[...]. Mol Cell 2002
372
12

A RanGTP-independent mechanism allows ribosomal protein nuclear import for ribosome assembly.
Sabina Schütz, Ute Fischer, Martin Altvater, Purnima Nerurkar, Cohue Peña, Michaela Gerber, Yiming Chang, Stefanie Caesar, Olga T Schubert, Gabriel Schlenstedt,[...]. Elife 2014
44
12

The Dedicated Chaperone Acl4 Escorts Ribosomal Protein Rpl4 to Its Nuclear Pre-60S Assembly Site.
Benjamin Pillet, Juan J García-Gómez, Patrick Pausch, Laurent Falquet, Gert Bange, Jesús de la Cruz, Dieter Kressler. PLoS Genet 2015
41
12

Rio1 mediates ATP-dependent final maturation of 40S ribosomal subunits.
Tomasz W Turowski, Simon Lebaron, Elodie Zhang, Lauri Peil, Tatiana Dudnakova, Elisabeth Petfalski, Sander Granneman, Juri Rappsilber, David Tollervey. Nucleic Acids Res 2014
62
12


RNA mimicry by the fap7 adenylate kinase in ribosome biogenesis.
Jérôme Loc'h, Magali Blaud, Stéphane Réty, Simon Lebaron, Patrick Deschamps, Joseph Bareille, Julie Jombart, Julien Robert-Paganin, Lila Delbos, Florian Chardon,[...]. PLoS Biol 2014
32
12

The path from nucleolar 90S to cytoplasmic 40S pre-ribosomes.
Thorsten Schäfer, Daniela Strauss, Elisabeth Petfalski, David Tollervey, Ed Hurt. EMBO J 2003
240
12

A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis.
François Dragon, Jennifer E G Gallagher, Patricia A Compagnone-Post, Brianna M Mitchell, Kara A Porwancher, Karen A Wehner, Steven Wormsley, Robert E Settlage, Jeffrey Shabanowitz, Yvonne Osheim,[...]. Nature 2002
525
12


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.