A citation-based method for searching scientific literature

Denise J Cai, Daniel Aharoni, Tristan Shuman, Justin Shobe, Jeremy Biane, Weilin Song, Brandon Wei, Michael Veshkini, Mimi La-Vu, Jerry Lou, Sergio E Flores, Isaac Kim, Yoshitake Sano, Miou Zhou, Karsten Baumgaertel, Ayal Lavi, Masakazu Kamata, Mark Tuszynski, Mark Mayford, Peyman Golshani, Alcino J Silva. Nature 2016
Times Cited: 354







List of co-cited articles
1066 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Competition between engrams influences fear memory formation and recall.
Asim J Rashid, Chen Yan, Valentina Mercaldo, Hwa-Lin Liz Hsiang, Sungmo Park, Christina J Cole, Antonietta De Cristofaro, Julia Yu, Charu Ramakrishnan, Soo Yeun Lee,[...]. Science 2016
147
27

Long-term dynamics of CA1 hippocampal place codes.
Yaniv Ziv, Laurie D Burns, Eric D Cocker, Elizabeth O Hamel, Kunal K Ghosh, Lacey J Kitch, Abbas El Gamal, Mark J Schnitzer. Nat Neurosci 2013
483
25

Miniaturized integration of a fluorescence microscope.
Kunal K Ghosh, Laurie D Burns, Eric D Cocker, Axel Nimmerjahn, Yaniv Ziv, Abbas El Gamal, Mark J Schnitzer. Nat Methods 2011
477
22

Optogenetic stimulation of a hippocampal engram activates fear memory recall.
Xu Liu, Steve Ramirez, Petti T Pang, Corey B Puryear, Arvind Govindarajan, Karl Deisseroth, Susumu Tonegawa. Nature 2012
756
22

Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
21

Memory engrams: Recalling the past and imagining the future.
Sheena A Josselyn, Susumu Tonegawa. Science 2020
150
21

Finding the engram.
Sheena A Josselyn, Stefan Köhler, Paul W Frankland. Nat Rev Neurosci 2015
243
20

Engrams and circuits crucial for systems consolidation of a memory.
Takashi Kitamura, Sachie K Ogawa, Dheeraj S Roy, Teruhiro Okuyama, Mark D Morrissey, Lillian M Smith, Roger L Redondo, Susumu Tonegawa. Science 2017
351
19

Efficient and accurate extraction of in vivo calcium signals from microendoscopic video data.
Pengcheng Zhou, Shanna L Resendez, Jose Rodriguez-Romaguera, Jessica C Jimenez, Shay Q Neufeld, Andrea Giovannucci, Johannes Friedrich, Eftychios A Pnevmatikakis, Garret D Stuber, Rene Hen,[...]. Elife 2018
167
19

Neurons are recruited to a memory trace based on relative neuronal excitability immediately before training.
Adelaide P Yiu, Valentina Mercaldo, Chen Yan, Blake Richards, Asim J Rashid, Hwa-Lin Liz Hsiang, Jessica Pressey, Vivek Mahadevan, Matthew M Tran, Steven A Kushner,[...]. Neuron 2014
207
16

Memory Engram Cells Have Come of Age.
Susumu Tonegawa, Xu Liu, Steve Ramirez, Roger Redondo. Neuron 2015
237
16

Localization of a stable neural correlate of associative memory.
Leon G Reijmers, Brian L Perkins, Naoki Matsuo, Mark Mayford. Science 2007
427
16

Hippocampal ensemble dynamics timestamp events in long-term memory.
Alon Rubin, Nitzan Geva, Liron Sheintuch, Yaniv Ziv. Elife 2015
110
15

Interregional synaptic maps among engram cells underlie memory formation.
Jun-Hyeok Choi, Su-Eon Sim, Ji-Il Kim, Dong Il Choi, Jihae Oh, Sanghyun Ye, Jaehyun Lee, TaeHyun Kim, Hyoung-Gon Ko, Chae-Seok Lim,[...]. Science 2018
118
15

Selective erasure of a fear memory.
Jin-Hee Han, Steven A Kushner, Adelaide P Yiu, Hwa-Lin Liz Hsiang, Thorsten Buch, Ari Waisman, Bruno Bontempi, Rachael L Neve, Paul W Frankland, Sheena A Josselyn. Science 2009
326
14

Creating a false memory in the hippocampus.
Steve Ramirez, Xu Liu, Pei-Ann Lin, Junghyup Suh, Michele Pignatelli, Roger L Redondo, Tomás J Ryan, Susumu Tonegawa. Science 2013
411
14

Synapse-specific representation of the identity of overlapping memory engrams.
Kareem Abdou, Mohammad Shehata, Kiriko Choko, Hirofumi Nishizono, Mina Matsuo, Shin-Ichi Muramatsu, Kaoru Inokuchi. Science 2018
65
21

Hippocampal memory traces are differentially modulated by experience, time, and adult neurogenesis.
Christine A Denny, Mazen A Kheirbek, Eva L Alba, Kenji F Tanaka, Rebecca A Brachman, Kimberly B Laughman, Nicole K Tomm, Gergely F Turi, Attila Losonczy, René Hen. Neuron 2014
256
13

Permanent genetic access to transiently active neurons via TRAP: targeted recombination in active populations.
Casey J Guenthner, Kazunari Miyamichi, Helen H Yang, H Craig Heller, Liqun Luo. Neuron 2013
267
13

Neuronal competition and selection during memory formation.
Jin-Hee Han, Steven A Kushner, Adelaide P Yiu, Christy J Cole, Anna Matynia, Robert A Brown, Rachael L Neve, John F Guzowski, Alcino J Silva, Sheena A Josselyn. Science 2007
384
12

Environment-specific expression of the immediate-early gene Arc in hippocampal neuronal ensembles.
J F Guzowski, B L McNaughton, C A Barnes, P F Worley. Nat Neurosci 1999
716
12

Temporal evolution of cortical ensembles promoting remote memory retrieval.
Laura A DeNardo, Cindy D Liu, William E Allen, Eliza L Adams, Drew Friedmann, Lisa Fu, Casey J Guenthner, Marc Tessier-Lavigne, Liqun Luo. Nat Neurosci 2019
101
12

The hippocampal engram maps experience but not place.
Kazumasa Z Tanaka, Hongshen He, Anupratap Tomar, Kazue Niisato, Arthur J Y Huang, Thomas J McHugh. Science 2018
75
16

The role of engram cells in the systems consolidation of memory.
Susumu Tonegawa, Mark D Morrissey, Takashi Kitamura. Nat Rev Neurosci 2018
137
12

Memory. Engram cells retain memory under retrograde amnesia.
Tomás J Ryan, Dheeraj S Roy, Michele Pignatelli, Autumn Arons, Susumu Tonegawa. Science 2015
284
12


CREB regulates excitability and the allocation of memory to subsets of neurons in the amygdala.
Yu Zhou, Jaejoon Won, Mikael Guzman Karlsson, Miou Zhou, Thomas Rogerson, Jayaprakash Balaji, Rachael Neve, Panayiota Poirazi, Alcino J Silva. Nat Neurosci 2009
305
11

Engram Cell Excitability State Determines the Efficacy of Memory Retrieval.
Michele Pignatelli, Tomás J Ryan, Dheeraj S Roy, Chanel Lovett, Lillian M Smith, Shruti Muralidhar, Susumu Tonegawa. Neuron 2019
75
14

Cortical representations are reinstated by the hippocampus during memory retrieval.
Kazumasa Z Tanaka, Aleksandr Pevzner, Anahita B Hamidi, Yuki Nakazawa, Jalina Graham, Brian J Wiltgen. Neuron 2014
198
11

Functionally Distinct Neuronal Ensembles within the Memory Engram.
Xiaochen Sun, Max J Bernstein, Meizhen Meng, Siyuan Rao, Andreas T Sørensen, Li Yao, Xiaohui Zhang, Polina O Anikeeva, Yingxi Lin. Cell 2020
54
20

Tracking the Same Neurons across Multiple Days in Ca2+ Imaging Data.
Liron Sheintuch, Alon Rubin, Noa Brande-Eilat, Nitzan Geva, Noa Sadeh, Or Pinchasof, Yaniv Ziv. Cell Rep 2017
73
15

Schemas and memory consolidation.
Dorothy Tse, Rosamund F Langston, Masaki Kakeyama, Ingrid Bethus, Patrick A Spooner, Emma R Wood, Menno P Witter, Richard G M Morris. Science 2007
622
10

Synaptic plasticity and memory: an evaluation of the hypothesis.
S J Martin, P D Grimwood, R G Morris. Annu Rev Neurosci 2000
10

The organization of recent and remote memories.
Paul W Frankland, Bruno Bontempi. Nat Rev Neurosci 2005
10

Bidirectional switch of the valence associated with a hippocampal contextual memory engram.
Roger L Redondo, Joshua Kim, Autumn L Arons, Steve Ramirez, Xu Liu, Susumu Tonegawa. Nature 2014
226
10

Direct reactivation of a coherent neocortical memory of context.
Kiriana K Cowansage, Tristan Shuman, Blythe C Dillingham, Allene Chang, Peyman Golshani, Mark Mayford. Neuron 2014
184
10

Overlapping memory trace indispensable for linking, but not recalling, individual memories.
Jun Yokose, Reiko Okubo-Suzuki, Masanori Nomoto, Noriaki Ohkawa, Hirofumi Nishizono, Akinobu Suzuki, Mina Matsuo, Shuhei Tsujimura, Yukari Takahashi, Masashi Nagase,[...]. Science 2017
47
19

Engineering a memory with LTD and LTP.
Sadegh Nabavi, Rocky Fox, Christophe D Proulx, John Y Lin, Roger Y Tsien, Roberto Malinow. Nature 2014
507
9

Orchestrated ensemble activities constitute a hippocampal memory engram.
Khaled Ghandour, Noriaki Ohkawa, Chi Chung Alan Fung, Hirotaka Asai, Yoshito Saitoh, Takashi Takekawa, Reiko Okubo-Suzuki, Shingo Soya, Hirofumi Nishizono, Mina Matsuo,[...]. Nat Commun 2019
39
23

NoRMCorre: An online algorithm for piecewise rigid motion correction of calcium imaging data.
Eftychios A Pnevmatikakis, Andrea Giovannucci. J Neurosci Methods 2017
198
9

Neuronal code for extended time in the hippocampus.
Emily A Mankin, Fraser T Sparks, Begum Slayyeh, Robert J Sutherland, Stefan Leutgeb, Jill K Leutgeb. Proc Natl Acad Sci U S A 2012
193
9

Simultaneous Denoising, Deconvolution, and Demixing of Calcium Imaging Data.
Eftychios A Pnevmatikakis, Daniel Soudry, Yuanjun Gao, Timothy A Machado, Josh Merel, David Pfau, Thomas Reardon, Yu Mu, Clay Lacefield, Weijian Yang,[...]. Neuron 2016
363
9

DeepLabCut: markerless pose estimation of user-defined body parts with deep learning.
Alexander Mathis, Pranav Mamidanna, Kevin M Cury, Taiga Abe, Venkatesh N Murthy, Mackenzie Weygandt Mathis, Matthias Bethge. Nat Neurosci 2018
628
9

An Integrated Index: Engrams, Place Cells, and Hippocampal Memory.
Travis D Goode, Kazumasa Z Tanaka, Amar Sahay, Thomas J McHugh. Neuron 2020
31
29


Hippocampal Somatostatin Interneurons Control the Size of Neuronal Memory Ensembles.
Thomas Stefanelli, Cristina Bertollini, Christian Lüscher, Dominique Muller, Pablo Mendez. Neuron 2016
113
8

Schema-dependent gene activation and memory encoding in neocortex.
Dorothy Tse, Tomonori Takeuchi, Masaki Kakeyama, Yasushi Kajii, Hiroyuki Okuno, Chiharu Tohyama, Haruhiko Bito, Richard G M Morris. Science 2011
324
8

Neuronal Allocation to a Hippocampal Engram.
Sungmo Park, Emily E Kramer, Valentina Mercaldo, Asim J Rashid, Nathan Insel, Paul W Frankland, Sheena A Josselyn. Neuropsychopharmacology 2016
74
10

A robust activity marking system for exploring active neuronal ensembles.
Andreas T Sørensen, Yonatan A Cooper, Michael V Baratta, Feng-Ju Weng, Yuxiang Zhang, Kartik Ramamoorthi, Robin Fropf, Emily LaVerriere, Jian Xue, Andrew Young,[...]. Elife 2016
59
13

Reactivation of neural ensembles during the retrieval of recent and remote memory.
Kaycie K Tayler, Kazumasa Z Tanaka, Leon G Reijmers, Brian J Wiltgen. Curr Biol 2013
144
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.