Krzysztof J Gorgolewski, Tibor Auer, Vince D Calhoun, R Cameron Craddock, Samir Das, Eugene P Duff, Guillaume Flandin, Satrajit S Ghosh, Tristan Glatard, Yaroslav O Halchenko, Daniel A Handwerker, Michael Hanke, David Keator, Xiangrui Li, Zachary Michael, Camille Maumet, B Nolan Nichols, Thomas E Nichols, John Pellman, Jean-Baptiste Poline, Ariel Rokem, Gunnar Schaefer, Vanessa Sochat, William Triplett, Jessica A Turner, Gaël Varoquaux, Russell A Poldrack. Sci Data 2016
Times Cited: 410
Times Cited: 410
Times Cited
Times Co-cited
Similarity
fMRIPrep: a robust preprocessing pipeline for functional MRI.
Oscar Esteban, Christopher J Markiewicz, Ross W Blair, Craig A Moodie, A Ilkay Isik, Asier Erramuzpe, James D Kent, Mathias Goncalves, Elizabeth DuPre, Madeleine Snyder,[...]. Nat Methods 2019
Oscar Esteban, Christopher J Markiewicz, Ross W Blair, Craig A Moodie, A Ilkay Isik, Asier Erramuzpe, James D Kent, Mathias Goncalves, Elizabeth DuPre, Madeleine Snyder,[...]. Nat Methods 2019
27
EEG-BIDS, an extension to the brain imaging data structure for electroencephalography.
Cyril R Pernet, Stefan Appelhoff, Krzysztof J Gorgolewski, Guillaume Flandin, Christophe Phillips, Arnaud Delorme, Robert Oostenveld. Sci Data 2019
Cyril R Pernet, Stefan Appelhoff, Krzysztof J Gorgolewski, Guillaume Flandin, Christophe Phillips, Arnaud Delorme, Robert Oostenveld. Sci Data 2019
21
Best practices in data analysis and sharing in neuroimaging using MRI.
Thomas E Nichols, Samir Das, Simon B Eickhoff, Alan C Evans, Tristan Glatard, Michael Hanke, Nikolaus Kriegeskorte, Michael P Milham, Russell A Poldrack, Jean-Baptiste Poline,[...]. Nat Neurosci 2017
Thomas E Nichols, Samir Das, Simon B Eickhoff, Alan C Evans, Tristan Glatard, Michael Hanke, Nikolaus Kriegeskorte, Michael P Milham, Russell A Poldrack, Jean-Baptiste Poline,[...]. Nat Neurosci 2017
17
MRIQC: Advancing the automatic prediction of image quality in MRI from unseen sites.
Oscar Esteban, Daniel Birman, Marie Schaer, Oluwasanmi O Koyejo, Russell A Poldrack, Krzysztof J Gorgolewski. PLoS One 2017
Oscar Esteban, Daniel Birman, Marie Schaer, Oluwasanmi O Koyejo, Russell A Poldrack, Krzysztof J Gorgolewski. PLoS One 2017
17
BIDS apps: Improving ease of use, accessibility, and reproducibility of neuroimaging data analysis methods.
Krzysztof J Gorgolewski, Fidel Alfaro-Almagro, Tibor Auer, Pierre Bellec, Mihai Capotă, M Mallar Chakravarty, Nathan W Churchill, Alexander Li Cohen, R Cameron Craddock, Gabriel A Devenyi,[...]. PLoS Comput Biol 2017
Krzysztof J Gorgolewski, Fidel Alfaro-Almagro, Tibor Auer, Pierre Bellec, Mihai Capotă, M Mallar Chakravarty, Nathan W Churchill, Alexander Li Cohen, R Cameron Craddock, Gabriel A Devenyi,[...]. PLoS Comput Biol 2017
16
The first step for neuroimaging data analysis: DICOM to NIfTI conversion.
Xiangrui Li, Paul S Morgan, John Ashburner, Jolinda Smith, Christopher Rorden. J Neurosci Methods 2016
Xiangrui Li, Paul S Morgan, John Ashburner, Jolinda Smith, Christopher Rorden. J Neurosci Methods 2016
16
FSL.
Mark Jenkinson, Christian F Beckmann, Timothy E J Behrens, Mark W Woolrich, Stephen M Smith. Neuroimage 2012
Mark Jenkinson, Christian F Beckmann, Timothy E J Behrens, Mark W Woolrich, Stephen M Smith. Neuroimage 2012
16
AFNI: software for analysis and visualization of functional magnetic resonance neuroimages.
R W Cox. Comput Biomed Res 1996
R W Cox. Comput Biomed Res 1996
15
The WU-Minn Human Connectome Project: an overview.
David C Van Essen, Stephen M Smith, Deanna M Barch, Timothy E J Behrens, Essa Yacoub, Kamil Ugurbil. Neuroimage 2013
David C Van Essen, Stephen M Smith, Deanna M Barch, Timothy E J Behrens, Essa Yacoub, Kamil Ugurbil. Neuroimage 2013
13
The minimal preprocessing pipelines for the Human Connectome Project.
Matthew F Glasser, Stamatios N Sotiropoulos, J Anthony Wilson, Timothy S Coalson, Bruce Fischl, Jesper L Andersson, Junqian Xu, Saad Jbabdi, Matthew Webster, Jonathan R Polimeni,[...]. Neuroimage 2013
Matthew F Glasser, Stamatios N Sotiropoulos, J Anthony Wilson, Timothy S Coalson, Bruce Fischl, Jesper L Andersson, Junqian Xu, Saad Jbabdi, Matthew Webster, Jonathan R Polimeni,[...]. Neuroimage 2013
13
N4ITK: improved N3 bias correction.
Nicholas J Tustison, Brian B Avants, Philip A Cook, Yuanjie Zheng, Alexander Egan, Paul A Yushkevich, James C Gee. IEEE Trans Med Imaging 2010
Nicholas J Tustison, Brian B Avants, Philip A Cook, Yuanjie Zheng, Alexander Egan, Paul A Yushkevich, James C Gee. IEEE Trans Med Imaging 2010
12
Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in python.
Krzysztof Gorgolewski, Christopher D Burns, Cindee Madison, Dav Clark, Yaroslav O Halchenko, Michael L Waskom, Satrajit S Ghosh. Front Neuroinform 2011
Krzysztof Gorgolewski, Christopher D Burns, Cindee Madison, Dav Clark, Yaroslav O Halchenko, Michael L Waskom, Satrajit S Ghosh. Front Neuroinform 2011
11
Symmetric diffeomorphic image registration with cross-correlation: evaluating automated labeling of elderly and neurodegenerative brain.
B B Avants, C L Epstein, M Grossman, J C Gee. Med Image Anal 2008
B B Avants, C L Epstein, M Grossman, J C Gee. Med Image Anal 2008
11
Cortical surface-based analysis. I. Segmentation and surface reconstruction.
A M Dale, B Fischl, M I Sereno. Neuroimage 1999
A M Dale, B Fischl, M I Sereno. Neuroimage 1999
11
Scanning the horizon: towards transparent and reproducible neuroimaging research.
Russell A Poldrack, Chris I Baker, Joke Durnez, Krzysztof J Gorgolewski, Paul M Matthews, Marcus R Munafò, Thomas E Nichols, Jean-Baptiste Poline, Edward Vul, Tal Yarkoni. Nat Rev Neurosci 2017
Russell A Poldrack, Chris I Baker, Joke Durnez, Krzysztof J Gorgolewski, Paul M Matthews, Marcus R Munafò, Thomas E Nichols, Jean-Baptiste Poline, Edward Vul, Tal Yarkoni. Nat Rev Neurosci 2017
11
The FAIR Guiding Principles for scientific data management and stewardship.
Mark D Wilkinson, Michel Dumontier, I Jsbrand Jan Aalbersberg, Gabrielle Appleton, Myles Axton, Arie Baak, Niklas Blomberg, Jan-Willem Boiten, Luiz Bonino da Silva Santos, Philip E Bourne,[...]. Sci Data 2016
Mark D Wilkinson, Michel Dumontier, I Jsbrand Jan Aalbersberg, Gabrielle Appleton, Myles Axton, Arie Baak, Niklas Blomberg, Jan-Willem Boiten, Luiz Bonino da Silva Santos, Philip E Bourne,[...]. Sci Data 2016
11
Spurious but systematic correlations in functional connectivity MRI networks arise from subject motion.
Jonathan D Power, Kelly A Barnes, Abraham Z Snyder, Bradley L Schlaggar, Steven E Petersen. Neuroimage 2012
Jonathan D Power, Kelly A Barnes, Abraham Z Snyder, Bradley L Schlaggar, Steven E Petersen. Neuroimage 2012
11
iEEG-BIDS, extending the Brain Imaging Data Structure specification to human intracranial electrophysiology.
Christopher Holdgraf, Stefan Appelhoff, Stephan Bickel, Kristofer Bouchard, Sasha D'Ambrosio, Olivier David, Orrin Devinsky, Benjamin Dichter, Adeen Flinker, Brett L Foster,[...]. Sci Data 2019
Christopher Holdgraf, Stefan Appelhoff, Stephan Bickel, Kristofer Bouchard, Sasha D'Ambrosio, Olivier David, Orrin Devinsky, Benjamin Dichter, Adeen Flinker, Brett L Foster,[...]. Sci Data 2019
25
Local-Global Parcellation of the Human Cerebral Cortex from Intrinsic Functional Connectivity MRI.
Alexander Schaefer, Ru Kong, Evan M Gordon, Timothy O Laumann, Xi-Nian Zuo, Avram J Holmes, Simon B Eickhoff, B T Thomas Yeo. Cereb Cortex 2018
Alexander Schaefer, Ru Kong, Evan M Gordon, Timothy O Laumann, Xi-Nian Zuo, Avram J Holmes, Simon B Eickhoff, B T Thomas Yeo. Cereb Cortex 2018
10
Machine learning for neuroimaging with scikit-learn.
Alexandre Abraham, Fabian Pedregosa, Michael Eickenberg, Philippe Gervais, Andreas Mueller, Jean Kossaifi, Alexandre Gramfort, Bertrand Thirion, Gaël Varoquaux. Front Neuroinform 2014
Alexandre Abraham, Fabian Pedregosa, Michael Eickenberg, Philippe Gervais, Andreas Mueller, Jean Kossaifi, Alexandre Gramfort, Bertrand Thirion, Gaël Varoquaux. Front Neuroinform 2014
10
Variability in the analysis of a single neuroimaging dataset by many teams.
Rotem Botvinik-Nezer, Felix Holzmeister, Colin F Camerer, Anna Dreber, Juergen Huber, Magnus Johannesson, Michael Kirchler, Roni Iwanir, Jeanette A Mumford, R Alison Adcock,[...]. Nature 2020
Rotem Botvinik-Nezer, Felix Holzmeister, Colin F Camerer, Anna Dreber, Juergen Huber, Magnus Johannesson, Michael Kirchler, Roni Iwanir, Jeanette A Mumford, R Alison Adcock,[...]. Nature 2020
10
A reproducible evaluation of ANTs similarity metric performance in brain image registration.
Brian B Avants, Nicholas J Tustison, Gang Song, Philip A Cook, Arno Klein, James C Gee. Neuroimage 2011
Brian B Avants, Nicholas J Tustison, Gang Song, Philip A Cook, Arno Klein, James C Gee. Neuroimage 2011
10
MEG-BIDS, the brain imaging data structure extended to magnetoencephalography.
Guiomar Niso, Krzysztof J Gorgolewski, Elizabeth Bock, Teon L Brooks, Guillaume Flandin, Alexandre Gramfort, Richard N Henson, Mainak Jas, Vladimir Litvak, Jeremy T Moreau,[...]. Sci Data 2018
Guiomar Niso, Krzysztof J Gorgolewski, Elizabeth Bock, Teon L Brooks, Guillaume Flandin, Alexandre Gramfort, Richard N Henson, Mainak Jas, Vladimir Litvak, Jeremy T Moreau,[...]. Sci Data 2018
17
EEGLAB: an open source toolbox for analysis of single-trial EEG dynamics including independent component analysis.
Arnaud Delorme, Scott Makeig. J Neurosci Methods 2004
Arnaud Delorme, Scott Makeig. J Neurosci Methods 2004
9
An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest.
Rahul S Desikan, Florent Ségonne, Bruce Fischl, Brian T Quinn, Bradford C Dickerson, Deborah Blacker, Randy L Buckner, Anders M Dale, R Paul Maguire, Bradley T Hyman,[...]. Neuroimage 2006
Rahul S Desikan, Florent Ségonne, Bruce Fischl, Brian T Quinn, Bradford C Dickerson, Deborah Blacker, Randy L Buckner, Anders M Dale, R Paul Maguire, Bradley T Hyman,[...]. Neuroimage 2006
9
The organization of the human cerebral cortex estimated by intrinsic functional connectivity.
B T Thomas Yeo, Fenna M Krienen, Jorge Sepulcre, Mert R Sabuncu, Danial Lashkari, Marisa Hollinshead, Joshua L Roffman, Jordan W Smoller, Lilla Zöllei, Jonathan R Polimeni,[...]. J Neurophysiol 2011
B T Thomas Yeo, Fenna M Krienen, Jorge Sepulcre, Mert R Sabuncu, Danial Lashkari, Marisa Hollinshead, Joshua L Roffman, Jordan W Smoller, Lilla Zöllei, Jonathan R Polimeni,[...]. J Neurophysiol 2011
9
Methods to detect, characterize, and remove motion artifact in resting state fMRI.
Jonathan D Power, Anish Mitra, Timothy O Laumann, Abraham Z Snyder, Bradley L Schlaggar, Steven E Petersen. Neuroimage 2014
Jonathan D Power, Anish Mitra, Timothy O Laumann, Abraham Z Snyder, Bradley L Schlaggar, Steven E Petersen. Neuroimage 2014
9
Accurate and robust brain image alignment using boundary-based registration.
Douglas N Greve, Bruce Fischl. Neuroimage 2009
Douglas N Greve, Bruce Fischl. Neuroimage 2009
9
Image processing and Quality Control for the first 10,000 brain imaging datasets from UK Biobank.
Fidel Alfaro-Almagro, Mark Jenkinson, Neal K Bangerter, Jesper L R Andersson, Ludovica Griffanti, Gwenaëlle Douaud, Stamatios N Sotiropoulos, Saad Jbabdi, Moises Hernandez-Fernandez, Emmanuel Vallee,[...]. Neuroimage 2018
Fidel Alfaro-Almagro, Mark Jenkinson, Neal K Bangerter, Jesper L R Andersson, Ludovica Griffanti, Gwenaëlle Douaud, Stamatios N Sotiropoulos, Saad Jbabdi, Moises Hernandez-Fernandez, Emmanuel Vallee,[...]. Neuroimage 2018
8
Power failure: why small sample size undermines the reliability of neuroscience.
Katherine S Button, John P A Ioannidis, Claire Mokrysz, Brian A Nosek, Jonathan Flint, Emma S J Robinson, Marcus R Munafò. Nat Rev Neurosci 2013
Katherine S Button, John P A Ioannidis, Claire Mokrysz, Brian A Nosek, Jonathan Flint, Emma S J Robinson, Marcus R Munafò. Nat Rev Neurosci 2013
8
Segmentation of brain MR images through a hidden Markov random field model and the expectation-maximization algorithm.
Y Zhang, M Brady, S Smith. IEEE Trans Med Imaging 2001
Y Zhang, M Brady, S Smith. IEEE Trans Med Imaging 2001
8
A component based noise correction method (CompCor) for BOLD and perfusion based fMRI.
Yashar Behzadi, Khaled Restom, Joy Liau, Thomas T Liu. Neuroimage 2007
Yashar Behzadi, Khaled Restom, Joy Liau, Thomas T Liu. Neuroimage 2007
8
FieldTrip: Open source software for advanced analysis of MEG, EEG, and invasive electrophysiological data.
Robert Oostenveld, Pascal Fries, Eric Maris, Jan-Mathijs Schoffelen. Comput Intell Neurosci 2011
Robert Oostenveld, Pascal Fries, Eric Maris, Jan-Mathijs Schoffelen. Comput Intell Neurosci 2011
7
ICA-AROMA: A robust ICA-based strategy for removing motion artifacts from fMRI data.
Raimon H R Pruim, Maarten Mennes, Daan van Rooij, Alberto Llera, Jan K Buitelaar, Christian F Beckmann. Neuroimage 2015
Raimon H R Pruim, Maarten Mennes, Daan van Rooij, Alberto Llera, Jan K Buitelaar, Christian F Beckmann. Neuroimage 2015
7
The Human Connectome Project: a data acquisition perspective.
D C Van Essen, K Ugurbil, E Auerbach, D Barch, T E J Behrens, R Bucholz, A Chang, L Chen, M Corbetta, S W Curtiss,[...]. Neuroimage 2012
D C Van Essen, K Ugurbil, E Auerbach, D Barch, T E J Behrens, R Bucholz, A Chang, L Chen, M Corbetta, S W Curtiss,[...]. Neuroimage 2012
6
The autism brain imaging data exchange: towards a large-scale evaluation of the intrinsic brain architecture in autism.
A Di Martino, C-G Yan, Q Li, E Denio, F X Castellanos, K Alaerts, J S Anderson, M Assaf, S Y Bookheimer, M Dapretto,[...]. Mol Psychiatry 2014
A Di Martino, C-G Yan, Q Li, E Denio, F X Castellanos, K Alaerts, J S Anderson, M Assaf, S Y Bookheimer, M Dapretto,[...]. Mol Psychiatry 2014
6
Functional connectivity in the motor cortex of resting human brain using echo-planar MRI.
B Biswal, F Z Yetkin, V M Haughton, J S Hyde. Magn Reson Med 1995
B Biswal, F Z Yetkin, V M Haughton, J S Hyde. Magn Reson Med 1995
6
Advances in functional and structural MR image analysis and implementation as FSL.
Stephen M Smith, Mark Jenkinson, Mark W Woolrich, Christian F Beckmann, Timothy E J Behrens, Heidi Johansen-Berg, Peter R Bannister, Marilena De Luca, Ivana Drobnjak, David E Flitney,[...]. Neuroimage 2004
Stephen M Smith, Mark Jenkinson, Mark W Woolrich, Christian F Beckmann, Timothy E J Behrens, Heidi Johansen-Berg, Peter R Bannister, Marilena De Luca, Ivana Drobnjak, David E Flitney,[...]. Neuroimage 2004
6
Whole brain segmentation: automated labeling of neuroanatomical structures in the human brain.
Bruce Fischl, David H Salat, Evelina Busa, Marilyn Albert, Megan Dieterich, Christian Haselgrove, Andre van der Kouwe, Ron Killiany, David Kennedy, Shuna Klaveness,[...]. Neuron 2002
Bruce Fischl, David H Salat, Evelina Busa, Marilyn Albert, Megan Dieterich, Christian Haselgrove, Andre van der Kouwe, Ron Killiany, David Kennedy, Shuna Klaveness,[...]. Neuron 2002
6
Harmonization of cortical thickness measurements across scanners and sites.
Jean-Philippe Fortin, Nicholas Cullen, Yvette I Sheline, Warren D Taylor, Irem Aselcioglu, Philip A Cook, Phil Adams, Crystal Cooper, Maurizio Fava, Patrick J McGrath,[...]. Neuroimage 2018
Jean-Philippe Fortin, Nicholas Cullen, Yvette I Sheline, Warren D Taylor, Irem Aselcioglu, Philip A Cook, Phil Adams, Crystal Cooper, Maurizio Fava, Patrick J McGrath,[...]. Neuroimage 2018
6
Making big data open: data sharing in neuroimaging.
Russell A Poldrack, Krzysztof J Gorgolewski. Nat Neurosci 2014
Russell A Poldrack, Krzysztof J Gorgolewski. Nat Neurosci 2014
6
Data sharing in neuroimaging research.
Jean-Baptiste Poline, Janis L Breeze, Satrajit Ghosh, Krzysztof Gorgolewski, Yaroslav O Halchenko, Michael Hanke, Christian Haselgrove, Karl G Helmer, David B Keator, Daniel S Marcus,[...]. Front Neuroinform 2012
Jean-Baptiste Poline, Janis L Breeze, Satrajit Ghosh, Krzysztof Gorgolewski, Yaroslav O Halchenko, Michael Hanke, Christian Haselgrove, Karl G Helmer, David B Keator, Daniel S Marcus,[...]. Front Neuroinform 2012
6
Functional connectome fingerprinting: identifying individuals using patterns of brain connectivity.
Emily S Finn, Xilin Shen, Dustin Scheinost, Monica D Rosenberg, Jessica Huang, Marvin M Chun, Xenophon Papademetris, R Todd Constable. Nat Neurosci 2015
Emily S Finn, Xilin Shen, Dustin Scheinost, Monica D Rosenberg, Jessica Huang, Marvin M Chun, Xenophon Papademetris, R Todd Constable. Nat Neurosci 2015
6
Data sharing and privacy issues in neuroimaging research: Opportunities, obstacles, challenges, and monsters under the bed.
Tonya White, Elisabet Blok, Vince D Calhoun. Hum Brain Mapp 2022
Tonya White, Elisabet Blok, Vince D Calhoun. Hum Brain Mapp 2022
27
Cluster failure: Why fMRI inferences for spatial extent have inflated false-positive rates.
Anders Eklund, Thomas E Nichols, Hans Knutsson. Proc Natl Acad Sci U S A 2016
Anders Eklund, Thomas E Nichols, Hans Knutsson. Proc Natl Acad Sci U S A 2016
6
6
MEG and EEG data analysis with MNE-Python.
Alexandre Gramfort, Martin Luessi, Eric Larson, Denis A Engemann, Daniel Strohmeier, Christian Brodbeck, Roman Goj, Mainak Jas, Teon Brooks, Lauri Parkkonen,[...]. Front Neurosci 2013
Alexandre Gramfort, Martin Luessi, Eric Larson, Denis A Engemann, Daniel Strohmeier, Christian Brodbeck, Roman Goj, Mainak Jas, Teon Brooks, Lauri Parkkonen,[...]. Front Neurosci 2013
6
Building a Science of Individual Differences from fMRI.
Julien Dubois, Ralph Adolphs. Trends Cogn Sci 2016
Julien Dubois, Ralph Adolphs. Trends Cogn Sci 2016
6
Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.