A citation-based method for searching scientific literature

Andrea K H Stavoe, Sarah E Hill, David H Hall, Daniel A Colón-Ramos. Dev Cell 2016
Times Cited: 86







List of co-cited articles
1953 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Loss of autophagy in the central nervous system causes neurodegeneration in mice.
Masaaki Komatsu, Satoshi Waguri, Tomoki Chiba, Shigeo Murata, Jun-ichi Iwata, Isei Tanida, Takashi Ueno, Masato Koike, Yasuo Uchiyama, Eiki Kominami,[...]. Nature 2006
46

Suppression of basal autophagy in neural cells causes neurodegenerative disease in mice.
Taichi Hara, Kenji Nakamura, Makoto Matsui, Akitsugu Yamamoto, Yohko Nakahara, Rika Suzuki-Migishima, Minesuke Yokoyama, Kenji Mishima, Ichiro Saito, Hideyuki Okano,[...]. Nature 2006
45


Compartment-Specific Regulation of Autophagy in Primary Neurons.
Sandra Maday, Erika L F Holzbaur. J Neurosci 2016
137
41

Regulation of presynaptic neurotransmission by macroautophagy.
Daniela Hernandez, Ciara A Torres, Wanda Setlik, Carolina Cebrián, Eugene V Mosharov, Guomei Tang, Hsiao-Chun Cheng, Nikolai Kholodilov, Olga Yarygina, Robert E Burke,[...]. Neuron 2012
187
41

A LRRK2-Dependent EndophilinA Phosphoswitch Is Critical for Macroautophagy at Presynaptic Terminals.
Sandra-Fausia Soukup, Sabine Kuenen, Roeland Vanhauwaert, Julia Manetsberger, Sergio Hernández-Díaz, Jef Swerts, Nils Schoovaerts, Sven Vilain, Natalia V Gounko, Katlijn Vints,[...]. Neuron 2016
114
40

Autophagy promotes synapse development in Drosophila.
Wei Shen, Barry Ganetzky. J Cell Biol 2009
156
37

Bassoon Controls Presynaptic Autophagy through Atg5.
Nathan D Okerlund, Katharina Schneider, Sergio Leal-Ortiz, Carolina Montenegro-Venegas, Sally A Kim, Loren C Garner, Clarissa L Waites, Eckart D Gundelfinger, Richard J Reimer, Craig C Garner. Neuron 2017
86
37

Loss of mTOR-dependent macroautophagy causes autistic-like synaptic pruning deficits.
Guomei Tang, Kathryn Gudsnuk, Sheng-Han Kuo, Marisa L Cotrina, Gorazd Rosoklija, Alexander Sosunov, Mark S Sonders, Ellen Kanter, Candace Castagna, Ai Yamamoto,[...]. Neuron 2014
528
34

The SAC1 domain in synaptojanin is required for autophagosome maturation at presynaptic terminals.
Roeland Vanhauwaert, Sabine Kuenen, Roy Masius, Adekunle Bademosi, Julia Manetsberger, Nils Schoovaerts, Laura Bounti, Serguei Gontcharenko, Jef Swerts, Sven Vilain,[...]. EMBO J 2017
99
32

Neuronal stimulation induces autophagy in hippocampal neurons that is involved in AMPA receptor degradation after chemical long-term depression.
Mohammad Shehata, Hiroyuki Matsumura, Reiko Okubo-Suzuki, Noriaki Ohkawa, Kaoru Inokuchi. J Neurosci 2012
162
31


Modulation of Autophagy by BDNF Underlies Synaptic Plasticity.
Vassiliki Nikoletopoulou, Kyriaki Sidiropoulou, Emmanouela Kallergi, Yannis Dalezios, Nektarios Tavernarakis. Cell Metab 2017
103
29

Mitophagy of damaged mitochondria occurs locally in distal neuronal axons and requires PINK1 and Parkin.
Ghazaleh Ashrafi, Julia S Schlehe, Matthew J LaVoie, Thomas L Schwarz. J Cell Biol 2014
305
26


Presynaptic terminals independently regulate synaptic clustering and autophagy of GABAA receptors in Caenorhabditis elegans.
Aaron M Rowland, Janet E Richmond, Jason G Olsen, David H Hall, Bruce A Bamber. J Neurosci 2006
107
24

Essential role for autophagy protein Atg7 in the maintenance of axonal homeostasis and the prevention of axonal degeneration.
Masaaki Komatsu, Qing Jun Wang, Gay R Holstein, Victor L Friedrich, Jun-ichi Iwata, Eiki Kominami, Brian T Chait, Keiji Tanaka, Zhenyu Yue. Proc Natl Acad Sci U S A 2007
430
24

Autophagy linked FYVE (Alfy/WDFY3) is required for establishing neuronal connectivity in the mammalian brain.
Joanna M Dragich, Takaaki Kuwajima, Megumi Hirose-Ikeda, Michael S Yoon, Evelien Eenjes, Joan R Bosco, Leora M Fox, Alf H Lystad, Tinmarla F Oo, Olga Yarygina,[...]. Elife 2016
46
45

In vivo analysis of autophagy in response to nutrient starvation using transgenic mice expressing a fluorescent autophagosome marker.
Noboru Mizushima, Akitsugu Yamamoto, Makoto Matsui, Tamotsu Yoshimori, Yoshinori Ohsumi. Mol Biol Cell 2004
23

The GTPase Rab26 links synaptic vesicles to the autophagy pathway.
Beyenech Binotti, Nathan J Pavlos, Dietmar Riedel, Dirk Wenzel, Gerd Vorbrüggen, Amanda M Schalk, Karin Kühnel, Janina Boyken, Christian Erck, Henrik Martens,[...]. Elife 2015
91
22

Control of autophagosome axonal retrograde flux by presynaptic activity unveiled using botulinum neurotoxin type a.
Tong Wang, Sally Martin, Andreas Papadopulos, Callista B Harper, Timur A Mavlyutov, Dhevahi Niranjan, Nick R Glass, Justin J Cooper-White, Jean-Baptiste Sibarita, Daniel Choquet,[...]. J Neurosci 2015
71
26

Hsc70-4 Deforms Membranes to Promote Synaptic Protein Turnover by Endosomal Microautophagy.
Valerie Uytterhoeven, Elsa Lauwers, Ine Maes, Katarzyna Miskiewicz, Manuel N Melo, Jef Swerts, Sabine Kuenen, Rafaël Wittocx, Nikky Corthout, Siewert-Jan Marrink,[...]. Neuron 2015
101
20

Extensive involvement of autophagy in Alzheimer disease: an immuno-electron microscopy study.
Ralph A Nixon, Jerzy Wegiel, Asok Kumar, Wai Haung Yu, Corrinne Peterhoff, Anne Cataldo, Ana Maria Cuervo. J Neuropathol Exp Neurol 2005
972
20

Axonal autophagosomes recruit dynein for retrograde transport through fusion with late endosomes.
Xiu-Tang Cheng, Bing Zhou, Mei-Yao Lin, Qian Cai, Zu-Hang Sheng. J Cell Biol 2015
109
20


Autophagy in the presynaptic compartment in health and disease.
Vinoy Vijayan, Patrik Verstreken. J Cell Biol 2017
87
18

Autophagy and its normal and pathogenic states in the brain.
Ai Yamamoto, Zhenyu Yue. Annu Rev Neurosci 2014
113
18

LC3, a mammalian homologue of yeast Apg8p, is localized in autophagosome membranes after processing.
Y Kabeya, N Mizushima, T Ueno, A Yamamoto, T Kirisako, T Noda, E Kominami, Y Ohsumi, T Yoshimori. EMBO J 2000
17

Endophilin-A Deficiency Induces the Foxo3a-Fbxo32 Network in the Brain and Causes Dysregulation of Autophagy and the Ubiquitin-Proteasome System.
John D Murdoch, Christine M Rostosky, Sindhuja Gowrisankaran, Amandeep S Arora, Sandra-Fausia Soukup, Ramon Vidal, Vincenzo Capece, Siona Freytag, Andre Fischer, Patrik Verstreken,[...]. Cell Rep 2016
64
23

Autophagy and Neurodegeneration: Pathogenic Mechanisms and Therapeutic Opportunities.
Fiona M Menzies, Angeleen Fleming, Andrea Caricasole, Carla F Bento, Stephen P Andrews, Avraham Ashkenazi, Jens Füllgrabe, Anne Jackson, Maria Jimenez Sanchez, Cansu Karabiyik,[...]. Neuron 2017
482
17


Retrograde transport of TrkB-containing autophagosomes via the adaptor AP-2 mediates neuronal complexity and prevents neurodegeneration.
Natalia L Kononenko, Gala A Claßen, Marijn Kuijpers, Dmytro Puchkov, Tanja Maritzen, Aleksandra Tempes, Anna R Malik, Agnieszka Skalecka, Sujoy Bera, Jacek Jaworski,[...]. Nat Commun 2017
68
22

Plasma membrane contributes to the formation of pre-autophagosomal structures.
Brinda Ravikumar, Kevin Moreau, Luca Jahreiss, Claudia Puri, David C Rubinsztein. Nat Cell Biol 2010
591
16

Autophagy negatively regulates early axon growth in cortical neurons.
Byung-Kwan Ban, Mi-Hee Jun, Hyun-Hee Ryu, Deok-Jin Jang, S Tariq Ahmad, Jin-A Lee. Mol Cell Biol 2013
58
24

Atg9a deficiency causes axon-specific lesions including neuronal circuit dysgenesis.
Junji Yamaguchi, Chigure Suzuki, Tomohisa Nanao, Soichirou Kakuta, Kentarou Ozawa, Isei Tanida, Tatsuya Saitoh, Takehiko Sunabori, Masaaki Komatsu, Keiji Tanaka,[...]. Autophagy 2018
34
41



Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition).
Daniel J Klionsky, Kotb Abdelmohsen, Akihisa Abe, Md Joynal Abedin, Hagai Abeliovich, Abraham Acevedo Arozena, Hiroaki Adachi, Christopher M Adams, Peter D Adams, Khosrow Adeli,[...]. Autophagy 2016
15

AMPK and mTOR regulate autophagy through direct phosphorylation of Ulk1.
Joungmok Kim, Mondira Kundu, Benoit Viollet, Kun-Liang Guan. Nat Cell Biol 2011
15


Distinct roles for motor neuron autophagy early and late in the SOD1G93A mouse model of ALS.
Noam D Rudnick, Christopher J Griffey, Paolo Guarnieri, Valeria Gerbino, Xueyong Wang, Jason A Piersaint, Juan Carlos Tapia, Mark M Rich, Tom Maniatis. Proc Natl Acad Sci U S A 2017
93
15

Autophagy Is Required for Memory Formation and Reverses Age-Related Memory Decline.
Mélissa Glatigny, Stéphanie Moriceau, Manon Rivagorda, Mariana Ramos-Brossier, Anna C Nascimbeni, Fabien Lante, Mary R Shanley, Nadir Boudarene, Audrey Rousseaud, Allyson K Friedman,[...]. Curr Biol 2019
64
20

Ambra1 regulates autophagy and development of the nervous system.
Gian Maria Fimia, Anastassia Stoykova, Alessandra Romagnoli, Luigi Giunta, Sabrina Di Bartolomeo, Roberta Nardacci, Marco Corazzari, Claudia Fuoco, Ahmet Ucar, Peter Schwartz,[...]. Nature 2007
685
13

ULK-Atg13-FIP200 complexes mediate mTOR signaling to the autophagy machinery.
Chang Hwa Jung, Chang Bong Jun, Seung-Hyun Ro, Young-Mi Kim, Neil Michael Otto, Jing Cao, Mondira Kundu, Do-Hyung Kim. Mol Biol Cell 2009
13

Massive accumulation of luminal protease-deficient axonal lysosomes at Alzheimer's disease amyloid plaques.
Swetha Gowrishankar, Peng Yuan, Yumei Wu, Matthew Schrag, Summer Paradise, Jaime Grutzendler, Pietro De Camilli, Shawn M Ferguson. Proc Natl Acad Sci U S A 2015
172
13

Spatiotemporal regulation of autophagy during Caenorhabditis elegans aging.
Jessica T Chang, Caroline Kumsta, Andrew B Hellman, Linnea M Adams, Malene Hansen. Elife 2017
89
13

Transcellular degradation of axonal mitochondria.
Chung-ha O Davis, Keun-Young Kim, Eric A Bushong, Elizabeth A Mills, Daniela Boassa, Tiffany Shih, Mira Kinebuchi, Sebastien Phan, Yi Zhou, Nathan A Bihlmeyer,[...]. Proc Natl Acad Sci U S A 2014
277
12

The role of autophagy during the early neonatal starvation period.
Akiko Kuma, Masahiko Hatano, Makoto Matsui, Akitsugu Yamamoto, Haruaki Nakaya, Tamotsu Yoshimori, Yoshinori Ohsumi, Takeshi Tokuhisa, Noboru Mizushima. Nature 2004
12

Autophagy induction enhances TDP43 turnover and survival in neuronal ALS models.
Sami J Barmada, Andrea Serio, Arpana Arjun, Bilada Bilican, Aaron Daub, D Michael Ando, Andrey Tsvetkov, Michael Pleiss, Xingli Li, Daniel Peisach,[...]. Nat Chem Biol 2014
263
12


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.