A citation-based method for searching scientific literature

Pierre-Antoine Dugué, Dallas R English, Robert J MacInnis, Chol-Hee Jung, Julie K Bassett, Liesel M FitzGerald, Ee Ming Wong, Jihoon E Joo, John L Hopper, Melissa C Southey, Graham G Giles, Roger L Milne. Sci Rep 2016
Times Cited: 30







List of co-cited articles
201 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


DNA methylation arrays as surrogate measures of cell mixture distribution.
Eugene Andres Houseman, William P Accomando, Devin C Koestler, Brock C Christensen, Carmen J Marsit, Heather H Nelson, John K Wiencke, Karl T Kelsey. BMC Bioinformatics 2012
56


Cohort Profile: The Melbourne Collaborative Cohort Study (Health 2020).
R L Milne, A S Fletcher, R J MacInnis, A M Hodge, A H Hopkins, J K Bassett, F J Bruinsma, B M Lynch, P A Dugué, H Jayasekara,[...]. Int J Epidemiol 2017
74
40

Global measures of peripheral blood-derived DNA methylation as a risk factor in the development of mature B-cell neoplasms.
Nicole Wong Doo, Enes Makalic, JiHoon E Joo, Claire M Vajdic, Daniel F Schmidt, Ee Ming Wong, Chol-Hee Jung, Gianluca Severi, Daniel J Park, Jessica Chung,[...]. Epigenomics 2016
24
41

The use of DNA from archival dried blood spots with the Infinium HumanMethylation450 array.
JiHoon E Joo, Ee Ming Wong, Laura Baglietto, Chol-Hee Jung, Helen Tsimiklis, Daniel J Park, Nicholas C Wong, Dallas R English, John L Hopper, Gianluca Severi,[...]. BMC Biotechnol 2013
47
33

Genome-wide measures of DNA methylation in peripheral blood and the risk of urothelial cell carcinoma: a prospective nested case-control study.
Pierre-Antoine Dugué, Maree T Brinkman, Roger L Milne, Ee Ming Wong, Liesel M FitzGerald, Julie K Bassett, Jihoon E Joo, Chol-Hee Jung, Enes Makalic, Daniel F Schmidt,[...]. Br J Cancer 2016
21
47

Epigenome-wide methylation in DNA from peripheral blood as a marker of risk for breast cancer.
Gianluca Severi, Melissa C Southey, Dallas R English, Chol-hee Jung, Andrew Lonie, Catriona McLean, Helen Tsimiklis, John L Hopper, Graham G Giles, Laura Baglietto. Breast Cancer Res Treat 2014
61
30

DNA methylation changes measured in pre-diagnostic peripheral blood samples are associated with smoking and lung cancer risk.
Laura Baglietto, Erica Ponzi, Philip Haycock, Allison Hodge, Manuela Bianca Assumma, Chol-Hee Jung, Jessica Chung, Francesca Fasanelli, Florence Guida, Gianluca Campanella,[...]. Int J Cancer 2017
66
30


Genome-wide methylation profiles reveal quantitative views of human aging rates.
Gregory Hannum, Justin Guinney, Ling Zhao, Li Zhang, Guy Hughes, SriniVas Sadda, Brandy Klotzle, Marina Bibikova, Jian-Bing Fan, Yuan Gao,[...]. Mol Cell 2013
26

Alternative dietary indices both strongly predict risk of chronic disease.
Stephanie E Chiuve, Teresa T Fung, Eric B Rimm, Frank B Hu, Marjorie L McCullough, Molin Wang, Meir J Stampfer, Walter C Willett. J Nutr 2012
859
23

Adjusting batch effects in microarray expression data using empirical Bayes methods.
W Evan Johnson, Cheng Li, Ariel Rabinovic. Biostatistics 2007
23

Genome-Wide Measures of Peripheral Blood Dna Methylation and Prostate Cancer Risk in a Prospective Nested Case-Control Study.
Liesel M FitzGerald, Haroon Naeem, Enes Makalic, Daniel F Schmidt, James G Dowty, Jihoon E Joo, Chol-Hee Jung, Julie K Bassett, Pierre-Antoine Dugue, Jessica Chung,[...]. Prostate 2017
22
31

Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays.
Martin J Aryee, Andrew E Jaffe, Hector Corrada-Bravo, Christine Ladd-Acosta, Andrew P Feinberg, Kasper D Hansen, Rafael A Irizarry. Bioinformatics 2014
20

Evaluation of microarray-based DNA methylation measurement using technical replicates: the Atherosclerosis Risk In Communities (ARIC) Study.
Maitreyee Bose, Chong Wu, James S Pankow, Ellen W Demerath, Jan Bressler, Myriam Fornage, Megan L Grove, Thomas H Mosley, Chindo Hicks, Kari North,[...]. BMC Bioinformatics 2014
24
25

Novel associations between blood DNA methylation and body mass index in middle-aged and older adults.
Y M Geurts, P-A Dugué, J E Joo, E Makalic, C-H Jung, W Guan, S Nguyen, M L Grove, E M Wong, A M Hodge,[...]. Int J Obes (Lond) 2018
23
26

DNA methylation-based biological aging and cancer risk and survival: Pooled analysis of seven prospective studies.
Pierre-Antoine Dugué, Julie K Bassett, JiHoon E Joo, Chol-Hee Jung, Ee Ming Wong, Margarita Moreno-Betancur, Daniel Schmidt, Enes Makalic, Shuai Li, Gianluca Severi,[...]. Int J Cancer 2018
57
20

Additional annotation enhances potential for biologically-relevant analysis of the Illumina Infinium HumanMethylation450 BeadChip array.
Magda E Price, Allison M Cotton, Lucia L Lam, Pau Farré, Eldon Emberly, Carolyn J Brown, Wendy P Robinson, Michael S Kobor. Epigenetics Chromatin 2013
307
16

Comparison of Beta-value and M-value methods for quantifying methylation levels by microarray analysis.
Pan Du, Xiao Zhang, Chiang-Ching Huang, Nadereh Jafari, Warren A Kibbe, Lifang Hou, Simon M Lin. BMC Bioinformatics 2010
997
16


Reducing the risk of false discovery enabling identification of biologically significant genome-wide methylation status using the HumanMethylation450 array.
Haroon Naeem, Nicholas C Wong, Zac Chatterton, Matthew K H Hong, John S Pedersen, Niall M Corcoran, Christopher M Hovens, Geoff Macintyre. BMC Genomics 2014
83
16

The Melbourne Collaborative Cohort Study.
G G Giles, D R English. IARC Sci Publ 2002
233
16

Body size and composition and colon cancer risk in men.
Robert J MacInnis, Dallas R English, John L Hopper, Andrew M Haydon, Dorota M Gertig, Graham G Giles. Cancer Epidemiol Biomarkers Prev 2004
112
16

Genetic and Environmental Causes of Variation in the Difference Between Biological Age Based on DNA Methylation and Chronological Age for Middle-Aged Women.
Shuai Li, Ee Ming Wong, JiHoon E Joo, Chol-Hee Jung, Jessica Chung, Carmel Apicella, Jennifer Stone, Gillian S Dite, Graham G Giles, Melissa C Southey,[...]. Twin Res Hum Genet 2015
24
20

DNA methylation age of blood predicts all-cause mortality in later life.
Riccardo E Marioni, Sonia Shah, Allan F McRae, Brian H Chen, Elena Colicino, Sarah E Harris, Jude Gibson, Anjali K Henders, Paul Redmond, Simon R Cox,[...]. Genome Biol 2015
519
16

DNA methylation age of blood predicts future onset of lung cancer in the women's health initiative.
Morgan E Levine, H Dean Hosgood, Brian Chen, Devin Absher, Themistocles Assimes, Steve Horvath. Aging (Albany NY) 2015
149
16

Genetic and environmental influences interact with age and sex in shaping the human methylome.
Jenny van Dongen, Michel G Nivard, Gonneke Willemsen, Jouke-Jan Hottenga, Quinta Helmer, Conor V Dolan, Erik A Ehli, Gareth E Davies, Maarten van Iterson, Charles E Breeze,[...]. Nat Commun 2016
138
16

DNA Methylation in Newborns and Maternal Smoking in Pregnancy: Genome-wide Consortium Meta-analysis.
Bonnie R Joubert, Janine F Felix, Paul Yousefi, Kelly M Bakulski, Allan C Just, Carrie Breton, Sarah E Reese, Christina A Markunas, Rebecca C Richmond, Cheng-Jian Xu,[...]. Am J Hum Genet 2016
376
16

De novo identification of differentially methylated regions in the human genome.
Timothy J Peters, Michael J Buckley, Aaron L Statham, Ruth Pidsley, Katherine Samaras, Reginald V Lord, Susan J Clark, Peter L Molloy. Epigenetics Chromatin 2015
338
16

Accounting for population stratification in DNA methylation studies.
Richard T Barfield, Lynn M Almli, Varun Kilaru, Alicia K Smith, Kristina B Mercer, Richard Duncan, Torsten Klengel, Divya Mehta, Elisabeth B Binder, Michael P Epstein,[...]. Genet Epidemiol 2014
119
16

A beta-mixture quantile normalization method for correcting probe design bias in Illumina Infinium 450 k DNA methylation data.
Andrew E Teschendorff, Francesco Marabita, Matthias Lechner, Thomas Bartlett, Jesper Tegner, David Gomez-Cabrero, Stephan Beck. Bioinformatics 2013
739
16

Intraindividual variation and short-term temporal trend in DNA methylation of human blood.
Yurii B Shvetsov, Min-Ae Song, Qiuyin Cai, Maarit Tiirikainen, Yong-Bing Xiang, Xiao-Ou Shu, Herbert Yu. Cancer Epidemiol Biomarkers Prev 2015
18
22

Is there a link between genome-wide hypomethylation in blood and cancer risk?
Kevin Brennan, James M Flanagan. Cancer Prev Res (Phila) 2012
80
13

Longitudinal changes of telomere length and epigenetic age related to traumatic stress and post-traumatic stress disorder.
Marco P Boks, Hans C van Mierlo, Bart P F Rutten, Timothy R D J Radstake, Lot De Witte, Elbert Geuze, Steve Horvath, Leonard C Schalkwyk, Christiaan H Vinkers, Jasper C A Broen,[...]. Psychoneuroendocrinology 2015
110
13

Menopause accelerates biological aging.
Morgan E Levine, Ake T Lu, Brian H Chen, Dena G Hernandez, Andrew B Singleton, Luigi Ferrucci, Stefania Bandinelli, Elias Salfati, JoAnn E Manson, Austin Quach,[...]. Proc Natl Acad Sci U S A 2016
171
13

Lifetime stress accelerates epigenetic aging in an urban, African American cohort: relevance of glucocorticoid signaling.
Anthony S Zannas, Janine Arloth, Tania Carrillo-Roa, Stella Iurato, Simone Röh, Kerry J Ressler, Charles B Nemeroff, Alicia K Smith, Bekh Bradley, Christine Heim,[...]. Genome Biol 2015
182
13

Aging of blood can be tracked by DNA methylation changes at just three CpG sites.
Carola Ingrid Weidner, Qiong Lin, Carmen Maike Koch, Lewin Eisele, Fabian Beier, Patrick Ziegler, Dirk Olaf Bauerschlag, Karl-Heinz Jöckel, Raimund Erbel, Thomas Walter Mühleisen,[...]. Genome Biol 2014
408
13

An epigenetic clock analysis of race/ethnicity, sex, and coronary heart disease.
Steve Horvath, Michael Gurven, Morgan E Levine, Benjamin C Trumble, Hillard Kaplan, Hooman Allayee, Beate R Ritz, Brian Chen, Ake T Lu, Tammy M Rickabaugh,[...]. Genome Biol 2016
269
13

DNA methylation-based measures of biological age: meta-analysis predicting time to death.
Brian H Chen, Riccardo E Marioni, Elena Colicino, Marjolein J Peters, Cavin K Ward-Caviness, Pei-Chien Tsai, Nicholas S Roetker, Allan C Just, Ellen W Demerath, Weihua Guan,[...]. Aging (Albany NY) 2016
400
13

Cross-sectional and longitudinal changes in DNA methylation with age: an epigenome-wide analysis revealing over 60 novel age-associated CpG sites.
Ines Florath, Katja Butterbach, Heiko Müller, Melanie Bewerunge-Hudler, Hermann Brenner. Hum Mol Genet 2014
190
13

DNA methylation and healthy human aging.
Meaghan J Jones, Sarah J Goodman, Michael S Kobor. Aging Cell 2015
344
13

Validation of a DNA methylation microarray for 450,000 CpG sites in the human genome.
Juan Sandoval, Holger Heyn, Sebastian Moran, Jordi Serra-Musach, Miguel A Pujana, Marina Bibikova, Manel Esteller. Epigenetics 2011
655
13

Epigenome-wide association of DNA methylation markers in peripheral blood from Indian Asians and Europeans with incident type 2 diabetes: a nested case-control study.
John C Chambers, Marie Loh, Benjamin Lehne, Alexander Drong, Jennifer Kriebel, Valeria Motta, Simone Wahl, Hannah R Elliott, Federica Rota, William R Scott,[...]. Lancet Diabetes Endocrinol 2015
218
13

Tobacco-smoking-related differential DNA methylation: 27K discovery and replication.
Lutz P Breitling, Rongxi Yang, Bernhard Korn, Barbara Burwinkel, Hermann Brenner. Am J Hum Genet 2011
439
13

lumi: a pipeline for processing Illumina microarray.
Pan Du, Warren A Kibbe, Simon M Lin. Bioinformatics 2008
13

Tobacco smoking leads to extensive genome-wide changes in DNA methylation.
Sonja Zeilinger, Brigitte Kühnel, Norman Klopp, Hansjörg Baurecht, Anja Kleinschmidt, Christian Gieger, Stephan Weidinger, Eva Lattka, Jerzy Adamski, Annette Peters,[...]. PLoS One 2013
455
13


When is baseline adjustment useful in analyses of change? An example with education and cognitive change.
M Maria Glymour, Jennifer Weuve, Lisa F Berkman, Ichiro Kawachi, James M Robins. Am J Epidemiol 2005
394
13

High density DNA methylation array with single CpG site resolution.
Marina Bibikova, Bret Barnes, Chan Tsan, Vincent Ho, Brandy Klotzle, Jennie M Le, David Delano, Lu Zhang, Gary P Schroth, Kevin L Gunderson,[...]. Genomics 2011
13

Critical evaluation of the Illumina MethylationEPIC BeadChip microarray for whole-genome DNA methylation profiling.
Ruth Pidsley, Elena Zotenko, Timothy J Peters, Mitchell G Lawrence, Gail P Risbridger, Peter Molloy, Susan Van Djik, Beverly Muhlhausler, Clare Stirzaker, Susan J Clark. Genome Biol 2016
378
13


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.