Yang Yun Li, Robert B Macgregor. J Phys Chem B 2016
Times Cited: 6
Times Cited: 6
Times Cited
Times Co-cited
Similarity
Structure of the Hybrid-2 type intramolecular human telomeric G-quadruplex in K+ solution: insights into structure polymorphism of the human telomeric sequence.
Jixun Dai, Megan Carver, Chandanamali Punchihewa, Roger A Jones, Danzhou Yang. Nucleic Acids Res 2007
Jixun Dai, Megan Carver, Chandanamali Punchihewa, Roger A Jones, Danzhou Yang. Nucleic Acids Res 2007
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Structure of the human telomere in K+ solution: a stable basket-type G-quadruplex with only two G-tetrad layers.
Kah Wai Lim, Samir Amrane, Serge Bouaziz, Weixin Xu, Yuguang Mu, Dinshaw J Patel, Kim Ngoc Luu, Anh Tuân Phan. J Am Chem Soc 2009
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High-throughput sequencing of DNA G-quadruplex structures in the human genome.
Vicki S Chambers, Giovanni Marsico, Jonathan M Boutell, Marco Di Antonio, Geoffrey P Smith, Shankar Balasubramanian. Nat Biotechnol 2015
Vicki S Chambers, Giovanni Marsico, Jonathan M Boutell, Marco Di Antonio, Geoffrey P Smith, Shankar Balasubramanian. Nat Biotechnol 2015
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Quantitative visualization of DNA G-quadruplex structures in human cells.
Giulia Biffi, David Tannahill, John McCafferty, Shankar Balasubramanian. Nat Chem 2013
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Machine learning model for sequence-driven DNA G-quadruplex formation.
Aleksandr B Sahakyan, Vicki S Chambers, Giovanni Marsico, Tobias Santner, Marco Di Antonio, Shankar Balasubramanian. Sci Rep 2017
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DNA G-quadruplexes in the human genome: detection, functions and therapeutic potential.
Robert Hänsel-Hertsch, Marco Di Antonio, Shankar Balasubramanian. Nat Rev Mol Cell Biol 2017
Robert Hänsel-Hertsch, Marco Di Antonio, Shankar Balasubramanian. Nat Rev Mol Cell Biol 2017
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Quadruplex Turncoats: Cation-Dependent Folding and Stability of Quadruplex-DNA Double Switches.
Eric Largy, Adrien Marchand, Samir Amrane, Valérie Gabelica, Jean-Louis Mergny. J Am Chem Soc 2016
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Influence of loop size on the stability of intramolecular DNA quadruplexes.
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G-quadruplexes and their regulatory roles in biology.
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Non-Canonical G-quadruplexes cause the hCEB1 minisatellite instability in Saccharomyces cerevisiae.
Aurèle Piazza, Xiaojie Cui, Michael Adrian, Frédéric Samazan, Brahim Heddi, Anh-Tuan Phan, Alain G Nicolas. Elife 2017
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Loop-length-dependent folding of G-quadruplexes.
Pascale Hazel, Julian Huppert, Shankar Balasubramanian, Stephen Neidle. J Am Chem Soc 2004
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A New G-Quadruplex with Hairpin Loop Immediately Upstream of the Human BCL2 P1 Promoter Modulates Transcription.
Buket Onel, Megan Carver, Guanhui Wu, Daria Timonina, Salil Kalarn, Marti Larriva, Danzhou Yang. J Am Chem Soc 2016
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Sequence effects in single-base loops for quadruplexes.
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Sequence effects of single base loops in intramolecular quadruplex DNA.
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G-Quadruplexes: Prediction, Characterization, and Biological Application.
Chun Kit Kwok, Catherine J Merrick. Trends Biotechnol 2017
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The parallel G-quadruplex structure of vertebrate telomeric repeat sequences is not the preferred folding topology under physiological conditions.
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Two-quartet G-quadruplexes formed by DNA sequences containing four contiguous GG runs.
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The kinetics and folding pathways of intramolecular G-quadruplex nucleic acids.
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Single Stranded Loops of Quadruplex DNA As Key Benchmark for Testing Nucleic Acids Force Fields.
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Pif1 family helicases suppress genome instability at G-quadruplex motifs.
Katrin Paeschke, Matthew L Bochman, P Daniela Garcia, Petr Cejka, Katherine L Friedman, Stephen C Kowalczykowski, Virginia A Zakian. Nature 2013
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G-quadruplex structures are stable and detectable in human genomic DNA.
Enid Yi Ni Lam, Dario Beraldi, David Tannahill, Shankar Balasubramanian. Nat Commun 2013
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Kinetic and thermodynamic control of G-quadruplex folding.
Yong Xue, Jia-quan Liu, Ke-wei Zheng, Zhong-yuan Kan, Yu-hua Hao, Zheng Tan. Angew Chem Int Ed Engl 2011
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Atomistic picture for the folding pathway of a hybrid-1 type human telomeric DNA G-quadruplex.
Yunqiang Bian, Cheng Tan, Jun Wang, Yuebiao Sheng, Jian Zhang, Wei Wang. PLoS Comput Biol 2014
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Flexibility and structural conservation in a c-KIT G-quadruplex.
Dengguo Wei, Jarmila Husby, Stephen Neidle. Nucleic Acids Res 2015
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G-quadruplexes in promoters throughout the human genome.
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Solution structure of the human telomeric repeat d[AG3(T2AG3)3] G-tetraplex.
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Involvement of Long-Lived Intermediate States in the Complex Folding Pathway of the Human Telomeric G-Quadruplex.
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DNA quadruplex folding formalism--a tutorial on quadruplex topologies.
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rG4-seq reveals widespread formation of G-quadruplex structures in the human transcriptome.
Chun Kit Kwok, Giovanni Marsico, Aleksandr B Sahakyan, Vicki S Chambers, Shankar Balasubramanian. Nat Methods 2016
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Conformation and stability of intramolecular telomeric G-quadruplexes: sequence effects in the loops.
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Predicting and understanding the stability of G-quadruplexes.
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A sequence-independent study of the influence of short loop lengths on the stability and topology of intramolecular DNA G-quadruplexes.
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Thermodynamics-hydration relationships within loops that affect G-quadruplexes under molecular crowding conditions.
Takeshi Fujimoto, Shu-ichi Nakano, Naoki Sugimoto, Daisuke Miyoshi. J Phys Chem B 2013
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Stability of telomeric G-quadruplexes.
Phong Lan Thao Tran, Jean-Louis Mergny, Patrizia Alberti. Nucleic Acids Res 2011
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A thermodynamic overview of naturally occurring intramolecular DNA quadruplexes.
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How long is too long? Effects of loop size on G-quadruplex stability.
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Volumetric contributions of loop regions of G-quadruplex DNA to the formation of the tertiary structure.
Shuntaro Takahashi, Naoki Sugimoto. Biophys Chem 2017
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Stability of intramolecular quadruplexes: sequence effects in the central loop.
Aurore Guédin, Patrizia Alberti, Jean-Louis Mergny. Nucleic Acids Res 2009
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Structural basis of DNA quadruplex-duplex junction formation.
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The major G-quadruplex formed in the human BCL-2 proximal promoter adopts a parallel structure with a 13-nt loop in K+ solution.
Prashansa Agrawal, Clement Lin, Raveendra I Mathad, Megan Carver, Danzhou Yang. J Am Chem Soc 2014
Prashansa Agrawal, Clement Lin, Raveendra I Mathad, Megan Carver, Danzhou Yang. J Am Chem Soc 2014
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Short loop length and high thermal stability determine genomic instability induced by G-quadruplex-forming minisatellites.
Aurèle Piazza, Michael Adrian, Frédéric Samazan, Brahim Heddi, Florian Hamon, Alexandre Serero, Judith Lopes, Marie-Paule Teulade-Fichou, Anh Tuân Phan, Alain Nicolas. EMBO J 2015
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Unfolding thermodynamics of intramolecular G-quadruplexes: base sequence contributions of the loops.
Chris M Olsen, Hui-Ting Lee, Luis A Marky. J Phys Chem B 2009
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G-quadruplex conformation and dynamics are determined by loop length and sequence.
Ramreddy Tippana, Weikun Xiao, Sua Myong. Nucleic Acids Res 2014
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