A citation-based method for searching scientific literature

Yujiao Liu, Chao Liu, Wen Dong, Wei Li. Front Med 2016
Times Cited: 8







List of co-cited articles
44 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The N-end rule pathway and regulation by proteolysis.
Alexander Varshavsky. Protein Sci 2011
456
62


An N-end rule pathway that recognizes proline and destroys gluconeogenic enzymes.
Shun-Jia Chen, Xia Wu, Brandon Wadas, Jang-Hyun Oh, Alexander Varshavsky. Science 2017
114
50

Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases.
Woo Suk Choi, Byung-Cheon Jeong, Yoo Jin Joo, Myeong-Ryeol Lee, Joon Kim, Michael J Eck, Hyun Kyu Song. Nat Struct Mol Biol 2010
101
50

Features and development of Coot.
P Emsley, B Lohkamp, W G Scott, K Cowtan. Acta Crystallogr D Biol Crystallogr 2010
50

The N-end rule pathway.
Takafumi Tasaki, Shashikanth M Sriram, Kyong Soo Park, Yong Tae Kwon. Annu Rev Biochem 2012
254
37

N-Terminal Acetylation-Targeted N-End Rule Proteolytic System: The Ac/N-End Rule Pathway.
Kang-Eun Lee, Ji-Eun Heo, Jeong-Mok Kim, Cheol-Sang Hwang. Mol Cells 2016
41
37

Structural basis of substrate recognition and specificity in the N-end rule pathway.
Edna Matta-Camacho, Guennadi Kozlov, Flora F Li, Kalle Gehring. Nat Struct Mol Biol 2010
75
37

XDS.
Wolfgang Kabsch. Acta Crystallogr D Biol Crystallogr 2010
37

N-terminal acetylation of cellular proteins creates specific degradation signals.
Cheol-Sang Hwang, Anna Shemorry, Alexander Varshavsky. Science 2010
445
37

N-degron and C-degron pathways of protein degradation.
Alexander Varshavsky. Proc Natl Acad Sci U S A 2019
222
37


At Long Last, a C-Terminal Bookend for the Ubiquitin Code.
Andrew Chatr-Aryamontri, Almer van der Sloot, Mike Tyers. Mol Cell 2018
10
37

Molecular basis of GID4-mediated recognition of degrons for the Pro/N-end rule pathway.
Cheng Dong, Heng Zhang, Li Li, Wolfram Tempel, Peter Loppnau, Jinrong Min. Nat Chem Biol 2018
51
37

The Eukaryotic Proteome Is Shaped by E3 Ubiquitin Ligases Targeting C-Terminal Degrons.
Itay Koren, Richard T Timms, Tomasz Kula, Qikai Xu, Mamie Z Li, Stephen J Elledge. Cell 2018
103
37

C-Terminal End-Directed Protein Elimination by CRL2 Ubiquitin Ligases.
Hsiu-Chuan Lin, Chi-Wei Yeh, Yen-Fu Chen, Ting-Ting Lee, Pei-Yun Hsieh, Domnita V Rusnac, Sung-Ya Lin, Stephen J Elledge, Ning Zheng, Hsueh-Chi S Yen. Mol Cell 2018
67
37

Mechanisms and Functions of Spatial Protein Quality Control.
Emily Mitchell Sontag, Rahul S Samant, Judith Frydman. Annu Rev Biochem 2017
147
37

Recognition of the Diglycine C-End Degron by CRL2KLHDC2 Ubiquitin Ligase.
Domniţa-Valeria Rusnac, Hsiu-Chuan Lin, Daniele Canzani, Karena X Tien, Thomas R Hinds, Ashley F Tsue, Matthew F Bush, Hsueh-Chi S Yen, Ning Zheng. Mol Cell 2018
33
37

In vivo aspects of protein folding and quality control.
David Balchin, Manajit Hayer-Hartl, F Ulrich Hartl. Science 2016
722
37


From start to finish: amino-terminal protein modifications as degradation signals in plants.
Daniel J Gibbs, Mark Bailey, Hannah M Tedds, Michael J Holdsworth. New Phytol 2016
42
25

The molecular principles of N-end rule recognition.
Shashikanth M Sriram, Yong Tae Kwon. Nat Struct Mol Biol 2010
37
25

The eukaryotic N-end rule pathway: conserved mechanisms and diverse functions.
Daniel J Gibbs, Jaume Bacardit, Andreas Bachmair, Michael J Holdsworth. Trends Cell Biol 2014
134
25

First Things First: Vital Protein Marks by N-Terminal Acetyltransferases.
Henriette Aksnes, Adrian Drazic, Michaël Marie, Thomas Arnesen. Trends Biochem Sci 2016
146
25

REFMAC5 for the refinement of macromolecular crystal structures.
Garib N Murshudov, Pavol Skubák, Andrey A Lebedev, Navraj S Pannu, Roberto A Steiner, Robert A Nicholls, Martyn D Winn, Fei Long, Alexei A Vagin. Acta Crystallogr D Biol Crystallogr 2011
25

Deficiency of UBR1, a ubiquitin ligase of the N-end rule pathway, causes pancreatic dysfunction, malformations and mental retardation (Johanson-Blizzard syndrome).
Martin Zenker, Julia Mayerle, Markus M Lerch, Andreas Tagariello, Klaus Zerres, Peter R Durie, Matthias Beier, Georg Hülskamp, Celina Guzman, Helga Rehder,[...]. Nat Genet 2005
175
25

The N-end rule pathway: emerging functions and molecular principles of substrate recognition.
Shashikanth M Sriram, Bo Yeon Kim, Yong Tae Kwon. Nat Rev Mol Cell Biol 2011
137
25

The N-end rule in bacteria.
J W Tobias, T E Shrader, G Rocap, A Varshavsky. Science 1991
422
25

The N-end rule pathway controls multiple functions during Arabidopsis shoot and leaf development.
Emmanuelle Graciet, Franziska Walter, Diarmuid S Ó'Maoiléidigh, Stephan Pollmann, Elliot M Meyerowitz, Alexander Varshavsky, Frank Wellmer. Proc Natl Acad Sci U S A 2009
88
25

Phaser crystallographic software.
Airlie J McCoy, Ralf W Grosse-Kunstleve, Paul D Adams, Martyn D Winn, Laurent C Storoni, Randy J Read. J Appl Crystallogr 2007
25

The N-end rule pathway is mediated by a complex of the RING-type Ubr1 and HECT-type Ufd4 ubiquitin ligases.
Cheol-Sang Hwang, Anna Shemorry, Daniel Auerbach, Alexander Varshavsky. Nat Cell Biol 2010
102
25

COSMIC: somatic cancer genetics at high-resolution.
Simon A Forbes, David Beare, Harry Boutselakis, Sally Bamford, Nidhi Bindal, John Tate, Charlotte G Cole, Sari Ward, Elisabeth Dawson, Laura Ponting,[...]. Nucleic Acids Res 2017
25

Ubiquitin Ligases: Structure, Function, and Regulation.
Ning Zheng, Nitzan Shabek. Annu Rev Biochem 2017
581
25

Formyl-methionine as an N-degron of a eukaryotic N-end rule pathway.
Jeong-Mok Kim, Ok-Hee Seok, Shinyeong Ju, Ji-Eun Heo, Jeonghun Yeom, Da-Som Kim, Joo-Yeon Yoo, Alexander Varshavsky, Cheolju Lee, Cheol-Sang Hwang. Science 2018
48
25

A glycine-specific N-degron pathway mediates the quality control of protein N-myristoylation.
Richard T Timms, Zhiqian Zhang, David Y Rhee, J Wade Harper, Itay Koren, Stephen J Elledge. Science 2019
68
25

ConSurf 2010: calculating evolutionary conservation in sequence and structure of proteins and nucleic acids.
Haim Ashkenazy, Elana Erez, Eric Martz, Tal Pupko, Nir Ben-Tal. Nucleic Acids Res 2010
25


Mechanisms underlying ubiquitination.
C M Pickart. Annu Rev Biochem 2001
25

Recognition of nonproline N-terminal residues by the Pro/N-degron pathway.
Cheng Dong, Shun-Jia Chen, Artem Melnykov, Sara Weirich, Kelly Sun, Albert Jeltsch, Alexander Varshavsky, Jinrong Min. Proc Natl Acad Sci U S A 2020
16
25

Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix.
Dorothee Liebschner, Pavel V Afonine, Matthew L Baker, Gábor Bunkóczi, Vincent B Chen, Tristan I Croll, Bradley Hintze, Li Wei Hung, Swati Jain, Airlie J McCoy,[...]. Acta Crystallogr D Struct Biol 2019
25

Enteroviral 3C protease activates the human NLRP1 inflammasome in airway epithelia.
Kim S Robinson, Daniel Eng Thiam Teo, Kai Sen Tan, Gee Ann Toh, Hsiao Hui Ong, Chrissie Kaishi Lim, Kenneth Lay, Bijin Veonice Au, Tian Sheng Lew, Justin Jang Hann Chu,[...]. Science 2020
76
25

Molecular basis for arginine C-terminal degron recognition by Cul2FEM1 E3 ligase.
Xinyan Chen, Shanhui Liao, Yaara Makaros, Qiong Guo, Zhongliang Zhu, Rina Krizelman, Karin Dahan, Xiaoming Tu, Xuebiao Yao, Itay Koren,[...]. Nat Chem Biol 2021
10
25

The Ubiquitin Code in the Ubiquitin-Proteasome System and Autophagy.
Yong Tae Kwon, Aaron Ciechanover. Trends Biochem Sci 2017
344
25

Molecular basis for ubiquitin ligase CRL2FEM1C-mediated recognition of C-degron.
Xiaojie Yan, Xiaolu Wang, Yao Li, Mengqi Zhou, Yanjun Li, Lili Song, Wenyi Mi, Jinrong Min, Cheng Dong. Nat Chem Biol 2021
9
25

Ubiquitin modifications.
Kirby N Swatek, David Komander. Cell Res 2016
881
12

Discovery of cellular regulation by protein degradation.
Alexander Varshavsky. J Biol Chem 2008
74
12


Cse4p is a component of the core centromere of Saccharomyces cerevisiae.
P B Meluh, P Yang, L Glowczewski, D Koshland, M M Smith. Cell 1998
304
12

Overlapping regulation of CenH3 localization and histone H3 turnover by CAF-1 and HIR proteins in Saccharomyces cerevisiae.
Jessica Lopes da Rosa, John Holik, Erin M Green, Oliver J Rando, Paul D Kaufman. Genetics 2011
40
12

Altered dosage and mislocalization of histone H3 and Cse4p lead to chromosome loss in Saccharomyces cerevisiae.
Wei-Chun Au, Matthew J Crisp, Steven Z DeLuca, Oliver J Rando, Munira A Basrai. Genetics 2008
67
12


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.