A citation-based method for searching scientific literature

Guanzhong Mao, Tien-Hao Chen, Abhishek S Srivastava, David Kosek, Pradip K Biswas, Venkat Gopalan, Leif A Kirsebom. PLoS One 2016
Times Cited: 5







List of co-cited articles
34 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


RNase P without RNA: identification and functional reconstitution of the human mitochondrial tRNA processing enzyme.
Johann Holzmann, Peter Frank, Esther Löffler, Keiryn L Bennett, Christopher Gerner, Walter Rossmanith. Cell 2008
384
100

Differential substrate recognition by isozymes of plant protein-only Ribonuclease P.
Michael J Howard, Agnes Karasik, Bradley P Klemm, Christine Mei, Aranganathan Shanmuganathan, Carol A Fierke, Markos Koutmos. RNA 2016
20
100

The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme.
C Guerrier-Takada, K Gardiner, T Marsh, N Pace, S Altman. Cell 1983
100

A single Arabidopsis organellar protein has RNase P activity.
Anthony Gobert, Bernard Gutmann, Andreas Taschner, Markus Gössringer, Johann Holzmann, Roland K Hartmann, Walter Rossmanith, Philippe Giegé. Nat Struct Mol Biol 2010
146
100

Nuclear RNase P of Trypanosoma brucei: a single protein in place of the multicomponent RNA-protein complex.
Andreas Taschner, Christoph Weber, Aurélie Buzet, Roland K Hartmann, Andreas Hartig, Walter Rossmanith. Cell Rep 2012
55
80

PRORP proteins support RNase P activity in both organelles and the nucleus in Arabidopsis.
Bernard Gutmann, Anthony Gobert, Philippe Giegé. Genes Dev 2012
87
80

Substrate recognition and cleavage-site selection by a single-subunit protein-only RNase P.
Nadia Brillante, Markus Gößringer, Dominik Lindenhofer, Ursula Toth, Walter Rossmanith, Roland K Hartmann. Nucleic Acids Res 2016
22
80

Structural insights into protein-only RNase P complexed with tRNA.
Anthony Gobert, Franziska Pinker, Olivier Fuchsbauer, Bernard Gutmann, René Boutin, Pierre Roblin, Claude Sauter, Philippe Giegé. Nat Commun 2013
53
80

tRNA processing by protein-only versus RNA-based RNase P: kinetic analysis reveals mechanistic differences.
Liudmila V Pavlova, Markus Gössringer, Christoph Weber, Aurélie Buzet, Walter Rossmanith, Roland K Hartmann. Chembiochem 2012
27
60

Transfer RNA maturation in Chlamydomonas mitochondria, chloroplast and the nucleus by a single RNase P protein.
Géraldine Bonnard, Anthony Gobert, Mathilde Arrivé, Franziska Pinker, Thalia Salinas-Giegé, Philippe Giegé. Plant J 2016
10
60

Mitochondrial ribonuclease P structure provides insight into the evolution of catalytic strategies for precursor-tRNA 5' processing.
Michael J Howard, Wan Hsin Lim, Carol A Fierke, Markos Koutmos. Proc Natl Acad Sci U S A 2012
81
60

Biophysical analysis of Arabidopsis protein-only RNase P alone and in complex with tRNA provides a refined model of tRNA binding.
Franziska Pinker, Cédric Schelcher, Pablo Fernandez-Millan, Anthony Gobert, Catherine Birck, Aurélien Thureau, Pierre Roblin, Philippe Giegé, Claude Sauter. J Biol Chem 2017
18
60


The enigma of ribonuclease P evolution.
Enno Hartmann, Roland K Hartmann. Trends Genet 2003
104
40

The making of tRNAs and more - RNase P and tRNase Z.
Roland K Hartmann, Markus Gössringer, Bettina Späth, Susan Fischer, Anita Marchfelder. Prog Mol Biol Transl Sci 2009
102
40

Ribonuclease P: the evolution of an ancient RNA enzyme.
Scott C Walker, David R Engelke. Crit Rev Biochem Mol Biol 2006
140
40


A functional RNase P protein subunit of bacterial origin in some eukaryotes.
Lien B Lai, Pilar Bernal-Bayard, Gireesha Mohannath, Stella M Lai, Venkat Gopalan, Agustín Vioque. Mol Genet Genomics 2011
20
40

Nuclear Protein-Only Ribonuclease P2 Structure and Biochemical Characterization Provide Insight into the Conserved Properties of tRNA 5' End Processing Enzymes.
Agnes Karasik, Aranganathan Shanmuganathan, Michael J Howard, Carol A Fierke, Markos Koutmos. J Mol Biol 2016
18
40



Pentatricopeptide repeat motifs in the processing enzyme PRORP1 in Arabidopsis thaliana play a crucial role in recognition of nucleotide bases at TψC loop in precursor tRNAs.
Takayoshi Imai, Takahiro Nakamura, Taku Maeda, Kaoru Nakayama, Xuzhu Gao, Takashi Nakashima, Yoshimitsu Kakuta, Makoto Kimura. Biochem Biophys Res Commun 2014
18
40

Structure of a bacterial ribonuclease P holoenzyme in complex with tRNA.
Nicholas J Reiter, Amy Osterman, Alfredo Torres-Larios, Kerren K Swinger, Tao Pan, Alfonso Mondragón. Nature 2010
196
40

Analysis of the Cleavage Mechanism by Protein-Only RNase P Using Precursor tRNA Substrates with Modifications at the Cleavage Site.
Dennis Walczyk, Markus Gößringer, Walter Rossmanith, Timofei S Zatsepin, Tatiana S Oretskaya, Roland K Hartmann. J Mol Biol 2016
5
40

The Restorer-of-fertility-like 2 pentatricopeptide repeat protein and RNase P are required for the processing of mitochondrial orf291 RNA in Arabidopsis.
Sota Fujii, Takamasa Suzuki, Philippe Giegé, Tetsuya Higashiyama, Nobuya Koizuka, Toshiharu Shikanai. Plant J 2016
23
40

Distribution of Ribonucleoprotein and Protein-Only RNase P in Eukarya.
Marcus Lechner, Walter Rossmanith, Roland K Hartmann, Clemens Thölken, Bernard Gutmann, Philippe Giegé, Anthony Gobert. Mol Biol Evol 2015
49
40

Use of chemical modification and mass spectrometry to identify substrate-contacting sites in proteinaceous RNase P, a tRNA processing enzyme.
Tien-Hao Chen, Akiko Tanimoto, Nikoloz Shkriabai, Mamuka Kvaratskhelia, Vicki Wysocki, Venkat Gopalan. Nucleic Acids Res 2016
13
40

Two exoribonucleases act sequentially to process mature 3'-ends of atp9 mRNAs in Arabidopsis mitochondria.
Romary Perrin, Etienne H Meyer, Marlyse Zaepfel, Yean-Jung Kim, Régis Mache, Jean-Michel Grienenberger, José M Gualberto, Dominique Gagliardi. J Biol Chem 2004
66
40

Molecular recognition of pre-tRNA by Arabidopsis protein-only Ribonuclease P.
Bradley P Klemm, Agnes Karasik, Kipchumba J Kaitany, Aranganathan Shanmuganathan, Matthew J Henley, Adam Z Thelen, Allison J L Dewar, Nathaniel D Jackson, Markos Koutmos, Carol A Fierke. RNA 2017
11
40

Relaxed transcription in Arabidopsis mitochondria is counterbalanced by RNA stability control mediated by polyadenylation and polynucleotide phosphorylase.
Sarah Holec, Heike Lange, Kristina Kühn, Malek Alioua, Thomas Börner, Dominique Gagliardi. Mol Cell Biol 2006
83
40


tRNA biology charges to the front.
Eric M Phizicky, Anita K Hopper. Genes Dev 2010
526
40

Cryo-EM Structure of the Human Ribonuclease P Holoenzyme.
Jian Wu, Shuangshuang Niu, Ming Tan, Chenhui Huang, Mingyue Li, Yang Song, Qianmin Wang, Juan Chen, Shaohua Shi, Pengfei Lan,[...]. Cell 2018
40
40

Structural insight into precursor tRNA processing by yeast ribonuclease P.
Pengfei Lan, Ming Tan, Yuebin Zhang, Shuangshuang Niu, Juan Chen, Shaohua Shi, Shuwan Qiu, Xuejuan Wang, Xiangda Peng, Gang Cai,[...]. Science 2018
32
40

Impact of RNA isolation protocols on RNA detection by Northern blotting.
Katrin Damm, Simone Bach, Katrin M H Müller, Gabriele Klug, Olga Y Burenina, Elena A Kubareva, Arnold Grünweller, Roland K Hartmann. Methods Mol Biol 2015
13
20

PlantRNA, a database for tRNAs of photosynthetic eukaryotes.
Valérie Cognat, Gaël Pawlak, Anne-Marie Duchêne, Magali Daujat, Anaïs Gigant, Thalia Salinas, Morgane Michaud, Bernard Gutmann, Philippe Giegé, Anthony Gobert,[...]. Nucleic Acids Res 2013
44
20

Mapping of mitochondrial mRNA termini in Arabidopsis thaliana: t-elements contribute to 5' and 3' end formation.
Joachim Forner, Bärbel Weber, Sabine Thuss, Steffen Wildum, Stefan Binder. Nucleic Acids Res 2007
99
20

The American cranberry mitochondrial genome reveals the presence of selenocysteine (tRNA-Sec and SECIS) insertion machinery in land plants.
Diego Fajardo, Brandon Schlautman, Shawn Steffan, James Polashock, Nicholi Vorsa, Juan Zalapa. Gene 2014
29
20



RNase P RNA-mediated catalysis.
L A Kirsebom. Biochem Soc Trans 2002
17
20




Fast mapping of short sequences with mismatches, insertions and deletions using index structures.
Steve Hoffmann, Christian Otto, Stefan Kurtz, Cynthia M Sharma, Philipp Khaitovich, Jörg Vogel, Peter F Stadler, Jörg Hackermüller. PLoS Comput Biol 2009
351
20

New prospects in studying the bacterial signal recognition particle pathway.
A A Herskovits, E S Bochkareva, E Bibi. Mol Microbiol 2000
91
20

G-1:C73 recognition by an arginine cluster in the active site of Escherichia coli histidyl-tRNA synthetase.
Susan A Connolly, Abbey E Rosen, Karin Musier-Forsyth, Christopher S Francklyn. Biochemistry 2004
30
20



Ribonuclease P substrate specificity: cleavage of a bacteriophage phi80-induced RNA.
A L Bothwell, B C Stark, S Altman. Proc Natl Acad Sci U S A 1976
46
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.