A citation-based method for searching scientific literature

Marianna Feretzaki, Joachim Lingner. Methods 2017
Times Cited: 39







List of co-cited articles
451 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Telomeric repeat containing RNA and RNA surveillance factors at mammalian chromosome ends.
Claus M Azzalin, Patrick Reichenbach, Lela Khoriauli, Elena Giulotto, Joachim Lingner. Science 2007
829
76


Functional characterization of the TERRA transcriptome at damaged telomeres.
Antonio Porro, Sascha Feuerhahn, Julien Delafontaine, Harold Riethman, Jacques Rougemont, Joachim Lingner. Nat Commun 2014
139
56

RNaseH1 regulates TERRA-telomeric DNA hybrids and telomere maintenance in ALT tumour cells.
Rajika Arora, Yongwoo Lee, Harry Wischnewski, Catherine M Brun, Tobias Schwarz, Claus M Azzalin. Nat Commun 2014
206
53

CpG-island promoters drive transcription of human telomeres.
Solomon G Nergadze, Benjamin O Farnung, Harry Wischnewski, Lela Khoriauli, Valerio Vitelli, Raghav Chawla, Elena Giulotto, Claus M Azzalin. RNA 2009
151
43

Telomeric RNAs are essential to maintain telomeres.
Juan José Montero, Isabel López de Silanes, Osvaldo Graña, Maria A Blasco. Nat Commun 2016
58
38

Telomere length regulates TERRA levels through increased trimethylation of telomeric H3K9 and HP1α.
Nausica Arnoult, Amandine Van Beneden, Anabelle Decottignies. Nat Struct Mol Biol 2012
154
35

Telomeric noncoding RNA TERRA is induced by telomere shortening to nucleate telomerase molecules at short telomeres.
Emilio Cusanelli, Carmina Angelica Perez Romero, Pascal Chartrand. Mol Cell 2013
137
35

Identification of TERRA locus unveils a telomere protection role through association to nearly all chromosomes.
Isabel López de Silanes, Osvaldo Graña, Maria Luigia De Bonis, Orlando Dominguez, David G Pisano, Maria A Blasco. Nat Commun 2014
58
35

TERRA RNA Antagonizes ATRX and Protects Telomeres.
Hsueh-Ping Chu, Catherine Cifuentes-Rojas, Barry Kesner, Eric Aeby, Hun-Goo Lee, Chunyao Wei, Hyun Jung Oh, Myriam Boukhali, Wilhelm Haas, Jeannie T Lee. Cell 2017
109
35


A role for CTCF and cohesin in subtelomere chromatin organization, TERRA transcription, and telomere end protection.
Zhong Deng, Zhuo Wang, Nick Stong, Robert Plasschaert, Aliah Moczan, Horng-Shen Chen, Sufeng Hu, Priyankara Wikramasinghe, Ramana V Davuluri, Marisa S Bartolomei,[...]. EMBO J 2012
106
35

TERRA RNA binding to TRF2 facilitates heterochromatin formation and ORC recruitment at telomeres.
Zhong Deng, Julie Norseen, Andreas Wiedmer, Harold Riethman, Paul M Lieberman. Mol Cell 2009
355
33

TERRA promotes telomerase-mediated telomere elongation in Schizosaccharomyces pombe.
Martin Moravec, Harry Wischnewski, Amadou Bah, Yan Hu, Na Liu, Lorenzo Lafranchi, Megan C King, Claus M Azzalin. EMBO Rep 2016
47
33

Telomeres in ICF syndrome cells are vulnerable to DNA damage due to elevated DNA:RNA hybrids.
Shira Sagie, Shir Toubiana, Stella R Hartono, Hagar Katzir, Aya Tzur-Gilat, Shany Havazelet, Claire Francastel, Guillaume Velasco, Frédéric Chédin, Sara Selig. Nat Commun 2017
54
33

Telomere Length Determines TERRA and R-Loop Regulation through the Cell Cycle.
Marco Graf, Diego Bonetti, Arianna Lockhart, Kamar Serhal, Vanessa Kellner, André Maicher, Pascale Jolivet, Maria Teresa Teixeira, Brian Luke. Cell 2017
122
33

Shelterin-Mediated Telomere Protection.
Titia de Lange. Annu Rev Genet 2018
235
30

The telomeric transcriptome of Schizosaccharomyces pombe.
Amadou Bah, Harry Wischnewski, Vadim Shchepachev, Claus M Azzalin. Nucleic Acids Res 2012
73
28

The Rat1p 5' to 3' exonuclease degrades telomeric repeat-containing RNA and promotes telomere elongation in Saccharomyces cerevisiae.
Brian Luke, Andrea Panza, Sophie Redon, Nahid Iglesias, Zhijian Li, Joachim Lingner. Mol Cell 2008
209
28

The non-coding RNA TERRA is a natural ligand and direct inhibitor of human telomerase.
Sophie Redon, Patrick Reichenbach, Joachim Lingner. Nucleic Acids Res 2010
228
25

Telomeric RNA-DNA hybrids affect telomere-length dynamics and senescence.
Bettina Balk, André Maicher, Martina Dees, Julia Klermund, Sarah Luke-Glaser, Katharina Bender, Brian Luke. Nat Struct Mol Biol 2013
182
25


Mammalian telomeres resemble fragile sites and require TRF1 for efficient replication.
Agnel Sfeir, Settapong T Kosiyatrakul, Dirk Hockemeyer, Sheila L MacRae, Jan Karlseder, Carl L Schildkraut, Titia de Lange. Cell 2009
650
25

Telomere functions grounding on TERRA firma.
Claus M Azzalin, Joachim Lingner. Trends Cell Biol 2015
118
23

TERRA-reinforced association of LSD1 with MRE11 promotes processing of uncapped telomeres.
Antonio Porro, Sascha Feuerhahn, Joachim Lingner. Cell Rep 2014
78
23




TERRA transcripts are bound by a complex array of RNA-binding proteins.
Isabel López de Silanes, Martina Stagno d'Alcontres, Maria A Blasco. Nat Commun 2010
96
20

Subtelomeric repetitive elements determine TERRA regulation by Rap1/Rif and Rap1/Sir complexes in yeast.
Nahid Iglesias, Sophie Redon, Verena Pfeiffer, Martina Dees, Joachim Lingner, Brian Luke. EMBO Rep 2011
69
20

PAR-TERRA directs homologous sex chromosome pairing.
Hsueh-Ping Chu, John E Froberg, Barry Kesner, Hyun Jung Oh, Fei Ji, Ruslan Sadreyev, Stefan F Pinter, Jeannie T Lee. Nat Struct Mol Biol 2017
21
38

Nuclear respiratory factor 1 and endurance exercise promote human telomere transcription.
Aurélie Diman, Joanna Boros, Florian Poulain, Julie Rodriguez, Marin Purnelle, Harikleia Episkopou, Luc Bertrand, Marc Francaux, Louise Deldicque, Anabelle Decottignies. Sci Adv 2016
48
20

A DNA damage checkpoint response in telomere-initiated senescence.
Fabrizio d'Adda di Fagagna, Philip M Reaper, Lorena Clay-Farrace, Heike Fiegler, Philippa Carr, Thomas Von Zglinicki, Gabriele Saretzki, Nigel P Carter, Stephen P Jackson. Nature 2003
20

Trypanosoma brucei RAP1 maintains telomere and subtelomere integrity by suppressing TERRA and telomeric RNA:DNA hybrids.
Vishal Nanavaty, Ranjodh Sandhu, Sanaa E Jehi, Unnati M Pandya, Bibo Li. Nucleic Acids Res 2017
32
21



Telomeres in cancer: tumour suppression and genome instability.
John Maciejowski, Titia de Lange. Nat Rev Mol Cell Biol 2017
284
17

TRF2 protects human telomeres from end-to-end fusions.
B van Steensel, A Smogorzewska, T de Lange. Cell 1998
17

Expression and differential regulation of human TERRA at several chromosome ends.
Marianna Feretzaki, Patricia Renck Nunes, Joachim Lingner. RNA 2019
27
25

Quantitative interaction screen of telomeric repeat-containing RNA reveals novel TERRA regulators.
Marion Scheibe, Nausica Arnoult, Dennis Kappei, Frank Buchholz, Anabelle Decottignies, Falk Butter, Matthias Mann. Genome Res 2013
52
15

TERRA and hnRNPA1 orchestrate an RPA-to-POT1 switch on telomeric single-stranded DNA.
Rachel Litman Flynn, Richard C Centore, Roderick J O'Sullivan, Rekha Rai, Alice Tse, Zhou Songyang, Sandy Chang, Jan Karlseder, Lee Zou. Nature 2011
226
15



Specific association of human telomerase activity with immortal cells and cancer.
N W Kim, M A Piatyszek, K R Prowse, C B Harley, M D West, P L Ho, G M Coviello, W E Wright, S L Weinrich, J W Shay. Science 1994
15

A quantitative telomeric chromatin isolation protocol identifies different telomeric states.
Larissa Grolimund, Eric Aeby, Romain Hamelin, Florence Armand, Diego Chiappe, Marc Moniatte, Joachim Lingner. Nat Commun 2013
72
15

The C-Circle Assay for alternative-lengthening-of-telomeres activity.
Jeremy D Henson, Loretta M Lau, Sylvia Koch, Nancy Martin La Rotta, Rebecca A Dagg, Roger R Reddel. Methods 2017
53
15

Deregulated telomere transcription causes replication-dependent telomere shortening and promotes cellular senescence.
André Maicher, Lisa Kastner, Martina Dees, Brian Luke. Nucleic Acids Res 2012
68
15

The THO complex component Thp2 counteracts telomeric R-loops and telomere shortening.
Verena Pfeiffer, Jérôme Crittin, Larissa Grolimund, Joachim Lingner. EMBO J 2013
86
15


Telomerase activity is associated with an increase in DNA methylation at the proximal subtelomere and a reduction in telomeric transcription.
Laura J Ng, Jennifer E Cropley, Hilda A Pickett, Roger R Reddel, Catherine M Suter. Nucleic Acids Res 2009
102
15


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.