A citation-based method for searching scientific literature

Marco Magistri, Nathalie Khoury, Emilia Maria Cristina Mazza, Dmitry Velmeshev, Jae K Lee, Silvio Bicciato, Pantelis Tsoulfas, Mohammad Ali Faghihi. Eur J Neurosci 2016
Times Cited: 21







List of co-cited articles
66 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Purification and Characterization of Progenitor and Mature Human Astrocytes Reveals Transcriptional and Functional Differences with Mouse.
Ye Zhang, Steven A Sloan, Laura E Clarke, Christine Caneda, Colton A Plaza, Paul D Blumenthal, Hannes Vogel, Gary K Steinberg, Michael S B Edwards, Gordon Li,[...]. Neuron 2016
33

Specification of transplantable astroglial subtypes from human pluripotent stem cells.
Robert Krencik, Jason P Weick, Yan Liu, Zhi-Jian Zhang, Su-Chun Zhang. Nat Biotechnol 2011
276
23

An Efficient Platform for Astrocyte Differentiation from Human Induced Pluripotent Stem Cells.
Julia Tcw, Minghui Wang, Anna A Pimenova, Kathryn R Bowles, Brigham J Hartley, Emre Lacin, Saima I Machlovi, Rawan Abdelaal, Celeste M Karch, Hemali Phatnani,[...]. Stem Cell Reports 2017
153
23

Uniquely hominid features of adult human astrocytes.
Nancy Ann Oberheim, Takahiro Takano, Xiaoning Han, Wei He, Jane H C Lin, Fushun Wang, Qiwu Xu, Jeffrey D Wyatt, Webster Pilcher, Jeffrey G Ojemann,[...]. J Neurosci 2009
755
19

A transcriptome database for astrocytes, neurons, and oligodendrocytes: a new resource for understanding brain development and function.
John D Cahoy, Ben Emery, Amit Kaushal, Lynette C Foo, Jennifer L Zamanian, Karen S Christopherson, Yi Xing, Jane L Lubischer, Paul A Krieg, Sergey A Krupenko,[...]. J Neurosci 2008
19

Creation of a library of induced pluripotent stem cells from Parkinsonian patients.
Staffan Holmqvist, Šárka Lehtonen, Margarita Chumarina, Katja A Puttonen, Carla Azevedo, Olga Lebedeva, Marika Ruponen, Minna Oksanen, Mehdi Djelloul, Anna Collin,[...]. NPJ Parkinsons Dis 2016
49
14

Highly efficient neural conversion of human ES and iPS cells by dual inhibition of SMAD signaling.
Stuart M Chambers, Christopher A Fasano, Eirini P Papapetrou, Mark Tomishima, Michel Sadelain, Lorenz Studer. Nat Biotechnol 2009
14

Differentiation of Inflammation-Responsive Astrocytes from Glial Progenitors Generated from Human Induced Pluripotent Stem Cells.
Renata Santos, Krishna C Vadodaria, Baptiste N Jaeger, Arianna Mei, Sabrina Lefcochilos-Fogelquist, Ana P D Mendes, Galina Erikson, Maxim Shokhirev, Lynne Randolph-Moore, Callie Fredlender,[...]. Stem Cell Reports 2017
74
14

Bioactive Compound Screen for Pharmacological Enhancers of Apolipoprotein E in Primary Human Astrocytes.
Gina M Finan, Ronald Realubit, Sungkwon Chung, Dieter Lütjohann, Nan Wang, John R Cirrito, Charles Karan, Tae-Wan Kim. Cell Chem Biol 2016
15
20

An RNA-sequencing transcriptome and splicing database of glia, neurons, and vascular cells of the cerebral cortex.
Ye Zhang, Kenian Chen, Steven A Sloan, Mariko L Bennett, Anja R Scholze, Sean O'Keeffe, Hemali P Phatnani, Paolo Guarnieri, Christine Caneda, Nadine Ruderisch,[...]. J Neurosci 2014
14

Neurotoxic reactive astrocytes are induced by activated microglia.
Shane A Liddelow, Kevin A Guttenplan, Laura E Clarke, Frederick C Bennett, Christopher J Bohlen, Lucas Schirmer, Mariko L Bennett, Alexandra E Münch, Won-Suk Chung, Todd C Peterson,[...]. Nature 2017
14



Generation of human pluripotent stem cell reporter lines for the isolation of and reporting on astrocytes generated from ventral midbrain and ventral spinal cord neural progenitors.
Staffan Holmqvist, Marinka Brouwer, Mehdi Djelloul, Alejandro Garcia Diaz, Michael J Devine, Anna Hammarberg, Karina Fog, Tilo Kunath, Laurent Roybon. Stem Cell Res 2015
21
14

Astrocytes and disease: a neurodevelopmental perspective.
Anna V Molofsky, Robert Krencik, Erik M Ullian, Hui-hsin Tsai, Benjamin Deneen, William D Richardson, Ben A Barres, David H Rowitch. Genes Dev 2012
442
14

Astrocyte Differentiation of Human Pluripotent Stem Cells: New Tools for Neurological Disorder Research.
Abinaya Chandrasekaran, Hasan X Avci, Marcel Leist, Julianna Kobolák, Andras Dinnyés. Front Cell Neurosci 2016
80
14

Regulation of chromatin structure by long noncoding RNAs: focus on natural antisense transcripts.
Marco Magistri, Mohammad Ali Faghihi, Georges St Laurent, Claes Wahlestedt. Trends Genet 2012
194
9

Antisense transcription in the mammalian transcriptome.
S Katayama, Y Tomaru, T Kasukawa, K Waki, M Nakanishi, M Nakamura, H Nishida, C C Yap, M Suzuki, J Kawai,[...]. Science 2005
9

Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses.
Moran N Cabili, Cole Trapnell, Loyal Goff, Magdalena Koziol, Barbara Tazon-Vega, Aviv Regev, John L Rinn. Genes Dev 2011
9

Expression of non-protein-coding antisense RNAs in genomic regions related to autism spectrum disorders.
Dmitry Velmeshev, Marco Magistri, Mohammad Ali Faghihi. Mol Autism 2013
40
9

Comprehensive Identification of Long Non-coding RNAs in Purified Cell Types from the Brain Reveals Functional LncRNA in OPC Fate Determination.
Xiaomin Dong, Kenian Chen, Raquel Cuevas-Diaz Duran, Yanan You, Steven A Sloan, Ye Zhang, Shan Zong, Qilin Cao, Ben A Barres, Jia Qian Wu. PLoS Genet 2015
60
9

Nuclear factor I isoforms regulate gene expression during the differentiation of human neural progenitors to astrocytes.
Katarzyna M Wilczynska, Sandeep K Singh, Bret Adams, Lauren Bryan, Raj R Rao, Kristoffer Valerie, Sarah Wright, Irene Griswold-Prenner, Tomasz Kordula. Stem Cells 2009
39
9

Astrocytic complexity distinguishes the human brain.
Nancy Ann Oberheim, Xiaohai Wang, Steven Goldman, Maiken Nedergaard. Trends Neurosci 2006
437
9

Modeling Alzheimer's disease with iPSCs reveals stress phenotypes associated with intracellular Aβ and differential drug responsiveness.
Takayuki Kondo, Masashi Asai, Kayoko Tsukita, Yumiko Kutoku, Yutaka Ohsawa, Yoshihide Sunada, Keiko Imamura, Naohiro Egawa, Naoki Yahata, Keisuke Okita,[...]. Cell Stem Cell 2013
501
9

Neuroinflammation in Alzheimer's disease.
Michael T Heneka, Monica J Carson, Joseph El Khoury, Gary E Landreth, Frederic Brosseron, Douglas L Feinstein, Andreas H Jacobs, Tony Wyss-Coray, Javier Vitorica, Richard M Ransohoff,[...]. Lancet Neurol 2015
9

LPS and IL-1 differentially activate mouse and human astrocytes: role of CD14.
Leonid Tarassishin, Hyeon-Sook Suh, Sunhee C Lee. Glia 2014
121
9

Brain energy metabolism: focus on astrocyte-neuron metabolic cooperation.
Mireille Bélanger, Igor Allaman, Pierre J Magistretti. Cell Metab 2011
9

Role of astroglia in Down's syndrome revealed by patient-derived human-induced pluripotent stem cells.
Chen Chen, Peng Jiang, Haipeng Xue, Suzanne E Peterson, Ha T Tran, Anna E McCann, Mana M Parast, Shenglan Li, David E Pleasure, Louise C Laurent,[...]. Nat Commun 2014
126
9

Identification of a Chrysanthemic Ester as an Apolipoprotein E Inducer in Astrocytes.
Jianjia Fan, Shahab Zareyan, Wenchen Zhao, Yoko Shimizu, Tom A Pfeifer, Jun-Hyung Tak, Murray B Isman, Bernard Van den Hoven, Mark E Duggan, Michael W Wood,[...]. PLoS One 2016
17
11

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
9

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
9


BDNF is essential to promote persistence of long-term memory storage.
Pedro Bekinschtein, Martín Cammarota, Cynthia Katche, Leandro Slipczuk, Janine I Rossato, Andrea Goldin, Ivan Izquierdo, Jorge H Medina. Proc Natl Acad Sci U S A 2008
435
9

Dissecting the human BDNF locus: bidirectional transcription, complex splicing, and multiple promoters.
Priit Pruunsild, Anna Kazantseva, Tamara Aid, Kaia Palm, Tõnis Timmusk. Genomics 2007
459
9

Rodent BDNF genes, novel promoters, novel splice variants, and regulation by cocaine.
Qing-Rong Liu, Lin Lu, Xu-Guang Zhu, Jian-Ping Gong, Yavin Shaham, George R Uhl. Brain Res 2006
233
9

Mouse and rat BDNF gene structure and expression revisited.
Tamara Aid, Anna Kazantseva, Marko Piirsoo, Kaia Palm, Tõnis Timmusk. J Neurosci Res 2007
701
9

Astrocytes: biology and pathology.
Michael V Sofroniew, Harry V Vinters. Acta Neuropathol 2010
9

Application of a translational profiling approach for the comparative analysis of CNS cell types.
Joseph P Doyle, Joseph D Dougherty, Myriam Heiman, Eric F Schmidt, Tanya R Stevens, Guojun Ma, Sujata Bupp, Prerana Shrestha, Rajiv D Shah, Martin L Doughty,[...]. Cell 2008
614
9

BMP signaling in astrocytes downregulates EGFR to modulate survival and maturation.
Anja R Scholze, Lynette C Foo, Sara Mulinyawe, Ben A Barres. PLoS One 2014
35
9

Immune attack: the role of inflammation in Alzheimer disease.
Frank L Heppner, Richard M Ransohoff, Burkhard Becher. Nat Rev Neurosci 2015
9


The Aging Astrocyte Transcriptome from Multiple Regions of the Mouse Brain.
Matthew M Boisvert, Galina A Erikson, Maxim N Shokhirev, Nicola J Allen. Cell Rep 2018
292
9

Development of a method for the purification and culture of rodent astrocytes.
Lynette C Foo, Nicola J Allen, Eric A Bushong, P Britten Ventura, Won-Suk Chung, Lu Zhou, John D Cahoy, Richard Daneman, Hui Zong, Mark H Ellisman,[...]. Neuron 2011
247
9

Molecular comparison of GLT1+ and ALDH1L1+ astrocytes in vivo in astroglial reporter mice.
Yongjie Yang, Svetlana Vidensky, Lin Jin, Chunfa Jie, Ileana Lorenzini, Miriam Frankl, Jeffrey D Rothstein. Glia 2011
165
9

Neural Circuit-Specialized Astrocytes: Transcriptomic, Proteomic, Morphological, and Functional Evidence.
Hua Chai, Blanca Diaz-Castro, Eiji Shigetomi, Emma Monte, J Christopher Octeau, Xinzhu Yu, Whitaker Cohn, Pradeep S Rajendran, Thomas M Vondriska, Julian P Whitelegge,[...]. Neuron 2017
327
9

deepTools2: a next generation web server for deep-sequencing data analysis.
Fidel Ramírez, Devon P Ryan, Björn Grüning, Vivek Bhardwaj, Fabian Kilpert, Andreas S Richter, Steffen Heyne, Friederike Dündar, Thomas Manke. Nucleic Acids Res 2016
9

CD44 expression identifies astrocyte-restricted precursor cells.
Ying Liu, Steve S W Han, Yuanyuan Wu, Therese M F Tuohy, Haipeng Xue, Jingli Cai, Stephen A Back, Larry S Sherman, Itzhak Fischer, Mahendra S Rao. Dev Biol 2004
143
9

Cell Biology of Astrocyte-Synapse Interactions.
Nicola J Allen, Cagla Eroglu. Neuron 2017
379
9

The transcription factor NFIA controls the onset of gliogenesis in the developing spinal cord.
Benjamin Deneen, Ritchie Ho, Agnes Lukaszewicz, Christian J Hochstim, Richard M Gronostajski, David J Anderson. Neuron 2006
316
9

Integrative genomics viewer.
James T Robinson, Helga Thorvaldsdóttir, Wendy Winckler, Mitchell Guttman, Eric S Lander, Gad Getz, Jill P Mesirov. Nat Biotechnol 2011
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.