A citation-based method for searching scientific literature

Harry B Gristick, Lotta von Boehmer, Anthony P West, Michael Schamber, Anna Gazumyan, Jovana Golijanin, Michael S Seaman, Gerd Fätkenheuer, Florian Klein, Michel C Nussenzweig, Pamela J Bjorkman. Nat Struct Mol Biol 2016
Times Cited: 142







List of co-cited articles
1231 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A next-generation cleaved, soluble HIV-1 Env trimer, BG505 SOSIP.664 gp140, expresses multiple epitopes for broadly neutralizing but not non-neutralizing antibodies.
Rogier W Sanders, Ronald Derking, Albert Cupo, Jean-Philippe Julien, Anila Yasmeen, Natalia de Val, Helen J Kim, Claudia Blattner, Alba Torrents de la Peña, Jacob Korzun,[...]. PLoS Pathog 2013
641
50

Structure and immune recognition of trimeric pre-fusion HIV-1 Env.
Marie Pancera, Tongqing Zhou, Aliaksandr Druz, Ivelin S Georgiev, Cinque Soto, Jason Gorman, Jinghe Huang, Priyamvada Acharya, Gwo-Yu Chuang, Gilad Ofek,[...]. Nature 2014
555
42

Trimeric HIV-1-Env Structures Define Glycan Shields from Clades A, B, and G.
Guillaume B E Stewart-Jones, Cinque Soto, Thomas Lemmin, Gwo-Yu Chuang, Aliaksandr Druz, Rui Kong, Paul V Thomas, Kshitij Wagh, Tongqing Zhou, Anna-Janina Behrens,[...]. Cell 2016
295
40

Cryo-EM structure of a native, fully glycosylated, cleaved HIV-1 envelope trimer.
Jeong Hyun Lee, Gabriel Ozorowski, Andrew B Ward. Science 2016
309
38

Crystal structure of a soluble cleaved HIV-1 envelope trimer.
Jean-Philippe Julien, Albert Cupo, Devin Sok, Robyn L Stanfield, Dmitry Lyumkis, Marc C Deller, Per-Johan Klasse, Dennis R Burton, Rogier W Sanders, John P Moore,[...]. Science 2013
662
36

Cryo-EM structure of a fully glycosylated soluble cleaved HIV-1 envelope trimer.
Dmitry Lyumkis, Jean-Philippe Julien, Natalia de Val, Albert Cupo, Clinton S Potter, Per-Johan Klasse, Dennis R Burton, Rogier W Sanders, John P Moore, Bridget Carragher,[...]. Science 2013
547
34

Broad and potent neutralizing antibodies from an African donor reveal a new HIV-1 vaccine target.
Laura M Walker, Sanjay K Phogat, Po-Ying Chan-Hui, Denise Wagner, Pham Phung, Julie L Goss, Terri Wrin, Melissa D Simek, Steven Fling, Jennifer L Mitcham,[...]. Science 2009
33

Broad neutralization coverage of HIV by multiple highly potent antibodies.
Laura M Walker, Michael Huber, Katie J Doores, Emilia Falkowska, Robert Pejchal, Jean-Philippe Julien, Sheng-Kai Wang, Alejandra Ramos, Po-Ying Chan-Hui, Matthew Moyle,[...]. Nature 2011
31

HIV Vaccine Design to Target Germline Precursors of Glycan-Dependent Broadly Neutralizing Antibodies.
Jon M Steichen, Daniel W Kulp, Talar Tokatlian, Amelia Escolano, Pia Dosenovic, Robyn L Stanfield, Laura E McCoy, Gabriel Ozorowski, Xiaozhen Hu, Oleksandr Kalyuzhniy,[...]. Immunity 2016
233
31

Broadly Neutralizing Antibody 8ANC195 Recognizes Closed and Open States of HIV-1 Env.
Louise Scharf, Haoqing Wang, Han Gao, Songye Chen, Alasdair W McDowall, Pamela J Bjorkman. Cell 2015
104
31

Open and closed structures reveal allostery and pliability in the HIV-1 envelope spike.
Gabriel Ozorowski, Jesper Pallesen, Natalia de Val, Dmitry Lyumkis, Christopher A Cottrell, Jonathan L Torres, Jeffrey Copps, Robyn L Stanfield, Albert Cupo, Pavel Pugach,[...]. Nature 2017
156
31

Sequence and structural convergence of broad and potent HIV antibodies that mimic CD4 binding.
Johannes F Scheid, Hugo Mouquet, Beatrix Ueberheide, Ron Diskin, Florian Klein, Thiago Y K Oliveira, John Pietzsch, David Fenyo, Alexander Abadir, Klara Velinzon,[...]. Science 2011
870
30

Rational design of envelope identifies broadly neutralizing human monoclonal antibodies to HIV-1.
Xueling Wu, Zhi-Yong Yang, Yuxing Li, Carl-Magnus Hogerkorp, William R Schief, Michael S Seaman, Tongqing Zhou, Stephen D Schmidt, Lan Wu, Ling Xu,[...]. Science 2010
29

Structural basis for broad and potent neutralization of HIV-1 by antibody VRC01.
Tongqing Zhou, Ivelin Georgiev, Xueling Wu, Zhi-Yong Yang, Kaifan Dai, Andrés Finzi, Young Do Kwon, Johannes F Scheid, Wei Shi, Ling Xu,[...]. Science 2010
876
28

Features and development of Coot.
P Emsley, B Lohkamp, W G Scott, K Cowtan. Acta Crystallogr D Biol Crystallogr 2010
28

Fusion peptide of HIV-1 as a site of vulnerability to neutralizing antibody.
Rui Kong, Kai Xu, Tongqing Zhou, Priyamvada Acharya, Thomas Lemmin, Kevin Liu, Gabriel Ozorowski, Cinque Soto, Justin D Taft, Robert T Bailer,[...]. Science 2016
227
28

Crystal structure, conformational fixation and entry-related interactions of mature ligand-free HIV-1 Env.
Young Do Kwon, Marie Pancera, Priyamvada Acharya, Ivelin S Georgiev, Emma T Crooks, Jason Gorman, M Gordon Joyce, Miklos Guttman, Xiaochu Ma, Sandeep Narpala,[...]. Nat Struct Mol Biol 2015
254
28

Design and crystal structure of a native-like HIV-1 envelope trimer that engages multiple broadly neutralizing antibody precursors in vivo.
Max Medina-Ramírez, Fernando Garces, Amelia Escolano, Patrick Skog, Steven W de Taeye, Ivan Del Moral-Sanchez, Andrew T McGuire, Anila Yasmeen, Anna-Janina Behrens, Gabriel Ozorowski,[...]. J Exp Med 2017
103
27

Antibody neutralization and escape by HIV-1.
Xiping Wei, Julie M Decker, Shuyi Wang, Huxiong Hui, John C Kappes, Xiaoyun Wu, Jesus F Salazar-Gonzalez, Maria G Salazar, J Michael Kilby, Michael S Saag,[...]. Nature 2003
24

cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination.
Ali Punjani, John L Rubinstein, David J Fleet, Marcus A Brubaker. Nat Methods 2017
24


PHENIX: a comprehensive Python-based system for macromolecular structure solution.
Paul D Adams, Pavel V Afonine, Gábor Bunkóczi, Vincent B Chen, Ian W Davis, Nathaniel Echols, Jeffrey J Headd, Li-Wei Hung, Gary J Kapral, Ralf W Grosse-Kunstleve,[...]. Acta Crystallogr D Biol Crystallogr 2010
23

A Broadly Neutralizing Antibody Targets the Dynamic HIV Envelope Trimer Apex via a Long, Rigidified, and Anionic β-Hairpin Structure.
Jeong Hyun Lee, Raiees Andrabi, Ching-Yao Su, Anila Yasmeen, Jean-Philippe Julien, Leopold Kong, Nicholas C Wu, Ryan McBride, Devin Sok, Matthias Pauthner,[...]. Immunity 2017
146
23

Multidonor analysis reveals structural elements, genetic determinants, and maturation pathway for HIV-1 neutralization by VRC01-class antibodies.
Tongqing Zhou, Jiang Zhu, Xueling Wu, Stephanie Moquin, Baoshan Zhang, Priyamvada Acharya, Ivelin S Georgiev, Han R Altae-Tran, Gwo-Yu Chuang, M Gordon Joyce,[...]. Immunity 2013
258
22

Cryo-EM structure of a CD4-bound open HIV-1 envelope trimer reveals structural rearrangements of the gp120 V1V2 loop.
Haoqing Wang, Alexander A Cohen, Rachel P Galimidi, Harry B Gristick, Grant J Jensen, Pamela J Bjorkman. Proc Natl Acad Sci U S A 2016
92
23

Supersite of immune vulnerability on the glycosylated face of HIV-1 envelope glycoprotein gp120.
Leopold Kong, Jeong Hyun Lee, Katie J Doores, Charles D Murin, Jean-Philippe Julien, Ryan McBride, Yan Liu, Andre Marozsan, Albert Cupo, Per-Johan Klasse,[...]. Nat Struct Mol Biol 2013
266
22

Structure of HIV-1 gp120 V1/V2 domain with broadly neutralizing antibody PG9.
Jason S McLellan, Marie Pancera, Chris Carrico, Jason Gorman, Jean-Philippe Julien, Reza Khayat, Robert Louder, Robert Pejchal, Mallika Sastry, Kaifan Dai,[...]. Nature 2011
665
22

Complex-type N-glycan recognition by potent broadly neutralizing HIV antibodies.
Hugo Mouquet, Louise Scharf, Zelda Euler, Yan Liu, Caroline Eden, Johannes F Scheid, Ariel Halper-Stromberg, Priyanthi N P Gnanapragasam, Daniel I R Spencer, Michael S Seaman,[...]. Proc Natl Acad Sci U S A 2012
405
22

Conformational dynamics of single HIV-1 envelope trimers on the surface of native virions.
James B Munro, Jason Gorman, Xiaochu Ma, Zhou Zhou, James Arthos, Dennis R Burton, Wayne C Koff, Joel R Courter, Amos B Smith, Peter D Kwong,[...]. Science 2014
339
22

Structural Repertoire of HIV-1-Neutralizing Antibodies Targeting the CD4 Supersite in 14 Donors.
Tongqing Zhou, Rebecca M Lynch, Lei Chen, Priyamvada Acharya, Xueling Wu, Nicole A Doria-Rose, M Gordon Joyce, Daniel Lingwood, Cinque Soto, Robert T Bailer,[...]. Cell 2015
225
21

Affinity Maturation of a Potent Family of HIV Antibodies Is Primarily Focused on Accommodating or Avoiding Glycans.
Fernando Garces, Jeong Hyun Lee, Natalia de Val, Alba Torrents de la Pena, Leopold Kong, Cristina Puchades, Yuanzi Hua, Robyn L Stanfield, Dennis R Burton, John P Moore,[...]. Immunity 2015
161
21

Structural evolution of glycan recognition by a family of potent HIV antibodies.
Fernando Garces, Devin Sok, Leopold Kong, Ryan McBride, Helen J Kim, Karen F Saye-Francisco, Jean-Philippe Julien, Yuanzi Hua, Albert Cupo, John P Moore,[...]. Cell 2014
139
21

Rational HIV immunogen design to target specific germline B cell receptors.
Joseph Jardine, Jean-Philippe Julien, Sergey Menis, Takayuki Ota, Oleksandr Kalyuzhniy, Andrew McGuire, Devin Sok, Po-Ssu Huang, Skye MacPherson, Meaghan Jones,[...]. Science 2013
517
21

A potent and broad neutralizing antibody recognizes and penetrates the HIV glycan shield.
Robert Pejchal, Katie J Doores, Laura M Walker, Reza Khayat, Po-Ssu Huang, Sheng-Kai Wang, Robyn L Stanfield, Jean-Philippe Julien, Alejandra Ramos, Max Crispin,[...]. Science 2011
554
21

Immunogenicity of Stabilized HIV-1 Envelope Trimers with Reduced Exposure of Non-neutralizing Epitopes.
Steven W de Taeye, Gabriel Ozorowski, Alba Torrents de la Peña, Miklos Guttman, Jean-Philippe Julien, Tom L G M van den Kerkhof, Judith A Burger, Laura K Pritchard, Pavel Pugach, Anila Yasmeen,[...]. Cell 2015
250
20

Quantification of the Impact of the HIV-1-Glycan Shield on Antibody Elicitation.
Tongqing Zhou, Nicole A Doria-Rose, Cheng Cheng, Guillaume B E Stewart-Jones, Gwo-Yu Chuang, Michael Chambers, Aliaksandr Druz, Hui Geng, Krisha McKee, Young Do Kwon,[...]. Cell Rep 2017
120
20

Structure of an HIV gp120 envelope glycoprotein in complex with the CD4 receptor and a neutralizing human antibody.
P D Kwong, R Wyatt, J Robinson, R W Sweet, J Sodroski, W A Hendrickson. Nature 1998
20

HIV-1 VACCINES. HIV-1 neutralizing antibodies induced by native-like envelope trimers.
Rogier W Sanders, Marit J van Gils, Ronald Derking, Devin Sok, Thomas J Ketas, Judith A Burger, Gabriel Ozorowski, Albert Cupo, Cassandra Simonich, Leslie Goo,[...]. Science 2015
383
19

Co-evolution of a broadly neutralizing HIV-1 antibody and founder virus.
Hua-Xin Liao, Rebecca Lynch, Tongqing Zhou, Feng Gao, S Munir Alam, Scott D Boyd, Andrew Z Fire, Krishna M Roskin, Chaim A Schramm, Zhenhai Zhang,[...]. Nature 2013
726
19

HIV-1 VACCINES. Priming a broadly neutralizing antibody response to HIV-1 using a germline-targeting immunogen.
Joseph G Jardine, Takayuki Ota, Devin Sok, Matthias Pauthner, Daniel W Kulp, Oleksandr Kalyuzhniy, Patrick D Skog, Theresa C Thinnes, Deepika Bhullar, Bryan Briney,[...]. Science 2015
269
19

Broadly neutralizing HIV antibodies define a glycan-dependent epitope on the prefusion conformation of gp41 on cleaved envelope trimers.
Emilia Falkowska, Khoa M Le, Alejandra Ramos, Katie J Doores, Jeong Hyun Lee, Claudia Blattner, Alejandro Ramirez, Ronald Derking, Marit J van Gils, Chi-Hui Liang,[...]. Immunity 2014
277
18

Antibody 8ANC195 reveals a site of broad vulnerability on the HIV-1 envelope spike.
Louise Scharf, Johannes F Scheid, Jeong Hyun Lee, Anthony P West, Courtney Chen, Han Gao, Priyanthi N P Gnanapragasam, René Mares, Michael S Seaman, Andrew B Ward,[...]. Cell Rep 2014
177
18


A native-like SOSIP.664 trimer based on an HIV-1 subtype B env gene.
Pavel Pugach, Gabriel Ozorowski, Albert Cupo, Rajesh Ringe, Anila Yasmeen, Natalia de Val, Ronald Derking, Helen J Kim, Jacob Korzun, Michael Golabek,[...]. J Virol 2015
185
18

Broadly Neutralizing Antibodies to HIV and Their Role in Vaccine Design.
Dennis R Burton, Lars Hangartner. Annu Rev Immunol 2016
371
18

Sequential Immunization Elicits Broadly Neutralizing Anti-HIV-1 Antibodies in Ig Knockin Mice.
Amelia Escolano, Jon M Steichen, Pia Dosenovic, Daniel W Kulp, Jovana Golijanin, Devin Sok, Natalia T Freund, Alexander D Gitlin, Thiago Oliveira, Tatsuya Araki,[...]. Cell 2016
207
18

Phaser crystallographic software.
Airlie J McCoy, Ralf W Grosse-Kunstleve, Paul D Adams, Martyn D Winn, Laurent C Storoni, Randy J Read. J Appl Crystallogr 2007
18

HIV-1 broadly neutralizing antibody precursor B cells revealed by germline-targeting immunogen.
Joseph G Jardine, Daniel W Kulp, Colin Havenar-Daughton, Anita Sarkar, Bryan Briney, Devin Sok, Fabian Sesterhenn, June Ereño-Orbea, Oleksandr Kalyuzhniy, Isaiah Deresa,[...]. Science 2016
266
18

Identification of a CD4-Binding-Site Antibody to HIV that Evolved Near-Pan Neutralization Breadth.
Jinghe Huang, Byong H Kang, Elise Ishida, Tongqing Zhou, Trevor Griesman, Zizhang Sheng, Fan Wu, Nicole A Doria-Rose, Baoshan Zhang, Krisha McKee,[...]. Immunity 2016
226
18

Partially Open HIV-1 Envelope Structures Exhibit Conformational Changes Relevant for Coreceptor Binding and Fusion.
Haoqing Wang, Christopher O Barnes, Zhi Yang, Michel C Nussenzweig, Pamela J Bjorkman. Cell Host Microbe 2018
56
32


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.