A citation-based method for searching scientific literature

Antonio C S Marcolino, William F Porto, Állan S Pires, Octavio L Franco, Sérgio A Alencar. J Theor Biol 2016
Times Cited: 7







List of co-cited articles
47 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Computational analyses and prediction of guanylin deleterious SNPs.
William F Porto, Octávio L Franco, Sérgio A Alencar. Peptides 2015
18
85


Theoretical structural characterization of lymphoguanylin: A potential candidate for the development of drugs to treat gastrointestinal disorders.
Állan S Pires, William F Porto, Pryscilla O Castro, Octavio L Franco, Sérgio A Alencar. J Theor Biol 2017
6
83

UniRef: comprehensive and non-redundant UniProt reference clusters.
Baris E Suzek, Hongzhan Huang, Peter McGarvey, Raja Mazumder, Cathy H Wu. Bioinformatics 2007
643
57

Discriminative modelling of context-specific amino acid substitution probabilities.
Christof Angermüller, Andreas Biegert, Johannes Söding. Bioinformatics 2012
32
57


GROMACS 4:  Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation.
Berk Hess, Carsten Kutzner, David van der Spoel, Erik Lindahl. J Chem Theory Comput 2008
57

PoPMuSiC 2.1: a web server for the estimation of protein stability changes upon mutation and sequence optimality.
Yves Dehouck, Jean Marc Kwasigroch, Dimitri Gilis, Marianne Rooman. BMC Bioinformatics 2011
265
57




Predicting the functional impact of protein mutations: application to cancer genomics.
Boris Reva, Yevgeniy Antipin, Chris Sander. Nucleic Acids Res 2011
42

PredictSNP: robust and accurate consensus classifier for prediction of disease-related mutations.
Jaroslav Bendl, Jan Stourac, Ondrej Salanda, Antonin Pavelka, Eric D Wieben, Jaroslav Zendulka, Jan Brezovsky, Jiri Damborsky. PLoS Comput Biol 2014
328
42

SuSPect: enhanced prediction of single amino acid variant (SAV) phenotype using network features.
Christopher M Yates, Ioannis Filippis, Lawrence A Kelley, Michael J E Sternberg. J Mol Biol 2014
116
42

A method and server for predicting damaging missense mutations.
Ivan A Adzhubei, Steffen Schmidt, Leonid Peshkin, Vasily E Ramensky, Anna Gerasimova, Peer Bork, Alexey S Kondrashov, Shamil R Sunyaev. Nat Methods 2010
42


Collective judgment predicts disease-associated single nucleotide variants.
Emidio Capriotti, Russ B Altman, Yana Bromberg. BMC Genomics 2013
126
42

The FoldX web server: an online force field.
Joost Schymkowitz, Jesper Borg, Francois Stricher, Robby Nys, Frederic Rousseau, Luis Serrano. Nucleic Acids Res 2005
42

Lymphoguanylin: cloning and characterization of a unique member of the guanylin peptide family.
L R Forte, S L Eber, X Fan, R M London, Y Wang, L M Rowland, D T Chin, R H Freeman, W J Krause. Endocrinology 1999
46
28

Renal effects of serine-7 analog of lymphoguanylin in ex vivo rat kidney.
M C Fonteles, S L Carrithers, H S Monteiro, A F Carvalho, G R Coelho, R N Greenberg, L R Forte. Am J Physiol Renal Physiol 2001
9
28



Solution structure of human proguanylin: the role of a hormone prosequence.
Thomas Lauber, Philipp Neudecker, Paul Rösch, Ute C Marx. J Biol Chem 2003
19
28

One peptide, two topologies: structure and interconversion dynamics of human uroguanylin isomers.
U C Marx, J Klodt, M Meyer, H Gerlach, P Rösch, W G Forssmann, K Adermann. J Pept Res 1998
24
28

AGGRESCAN: a server for the prediction and evaluation of "hot spots" of aggregation in polypeptides.
Oscar Conchillo-Solé, Natalia S de Groot, Francesc X Avilés, Josep Vendrell, Xavier Daura, Salvador Ventura. BMC Bioinformatics 2007
580
28

Plecanatide and dolcanatide, novel guanylate cyclase-C agonists, ameliorate gastrointestinal inflammation in experimental models of murine colitis.
Kunwar Shailubhai, Vaseem Palejwala, Krishna Priya Arjunan, Sayali Saykhedkar, Bradley Nefsky, John A Foss, Stephen Comiskey, Gary S Jacob, Scott E Plevy. World J Gastrointest Pharmacol Ther 2015
40
28

Uroguanylin: structure and activity of a second endogenous peptide that stimulates intestinal guanylate cyclase.
F K Hamra, L R Forte, S L Eber, N V Pidhorodeckyj, W J Krause, R H Freeman, D T Chin, J A Tompkins, K F Fok, C E Smith. Proc Natl Acad Sci U S A 1993
296
28

Guanylin: an endogenous activator of intestinal guanylate cyclase.
M G Currie, K F Fok, J Kato, R J Moore, F K Hamra, K L Duffin, C E Smith. Proc Natl Acad Sci U S A 1992
497
28

Regulation of intestinal uroguanylin/guanylin receptor-mediated responses by mucosal acidity.
F K Hamra, S L Eber, D T Chin, M G Currie, L R Forte. Proc Natl Acad Sci U S A 1997
95
28



Predicting the functional effect of amino acid substitutions and indels.
Yongwook Choi, Gregory E Sims, Sean Murphy, Jason R Miller, Agnes P Chan. PLoS One 2012
28


PON-P2: prediction method for fast and reliable identification of harmful variants.
Abhishek Niroula, Siddhaling Urolagin, Mauno Vihinen. PLoS One 2015
113
28

mCSM: predicting the effects of mutations in proteins using graph-based signatures.
Douglas E V Pires, David B Ascher, Tom L Blundell. Bioinformatics 2014
407
28

Prediction of the impact of coding missense and nonsense single nucleotide polymorphisms on HD5 and HBD1 antibacterial activity against Escherichia coli.
William F Porto, Diego O Nolasco, Állan S Pires, Rinaldo W Pereira, Octávio L Franco, Sérgio A Alencar. Biopolymers 2016
10
28

HD5 and HBD1 variants' solvation potential energy correlates with their antibacterial activity against Escherichia coli.
William F Porto, Diego O Nolasco, Állan S Pires, Gabriel R Fernandes, Octávio L Franco, Sérgio A Alencar. Biopolymers 2016
6
33

In silico analyses of deleterious missense SNPs of human apolipoprotein E3.
Allan S Pires, William F Porto, Octavio L Franco, Sérgio A Alencar. Sci Rep 2017
14
28

In silico screening, molecular docking, and molecular dynamics studies of SNP-derived human P5CR mutants.
Peng Sang, Wei Hu, Yu-Jia Ye, Lin-Hua Li, Chao Zhang, Yue-Hui Xie, Zhao-Hui Meng. J Biomol Struct Dyn 2017
7
28

Impact of point mutation P29S in RAC1 on tumorigenesis.
Vidya Rajendran, Chandrasekhar Gopalakrishnan, Rituraj Purohit. Tumour Biol 2016
55
28

Prediction and interpretation of deleterious coding variants in terms of protein structural stability.
François Ancien, Fabrizio Pucci, Maxime Godfroid, Marianne Rooman. Sci Rep 2018
28
28

Computational Investigation of Growth Hormone Receptor Trp169Arg Heterozygous Mutation in a Child With Short Stature.
William Farias Porto, Felipe Albuquerque Marques, Huri Brito Pogue, Maria Teresinha de Oliveira Cardoso, Maria Gabriela Rodrigues do Vale, Állan da Silva Pires, Octavio Luiz Franco, Sérgio Amorim de Alencar, Robert Pogue. J Cell Biochem 2017
4
50


dbSNP: the NCBI database of genetic variation.
S T Sherry, M H Ward, M Kholodov, J Baker, L Phan, E M Smigielski, K Sirotkin. Nucleic Acids Res 2001
28

SDM: a server for predicting effects of mutations on protein stability.
Arun Prasad Pandurangan, Bernardo Ochoa-Montaño, David B Ascher, Tom L Blundell. Nucleic Acids Res 2017
190
28

Predicting the functional, molecular, and phenotypic consequences of amino acid substitutions using hidden Markov models.
Hashem A Shihab, Julian Gough, David N Cooper, Peter D Stenson, Gary L A Barker, Keith J Edwards, Ian N M Day, Tom R Gaunt. Hum Mutat 2013
616
28

Evidence of colorectal cancer-associated mutation in MCAK: a computational report.
Ambuj Kumar, Vidya Rajendran, Rao Sethumadhavan, Rituraj Purohit. Cell Biochem Biophys 2013
23
28

ESR spectroscopy identifies inhibitory Cu2+ sites in a DNA-modifying enzyme to reveal determinants of catalytic specificity.
Zhongyu Yang, Michael R Kurpiewski, Ming Ji, Jacque E Townsend, Preeti Mehta, Linda Jen-Jacobson, Sunil Saxena. Proc Natl Acad Sci U S A 2012
48
14


Cellular effects of guanylin and uroguanylin.
Aleksandra Sindić, Eberhard Schlatter. J Am Soc Nephrol 2006
53
14


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.