A citation-based method for searching scientific literature

Wentao Li, Shisheng Li. Photochem Photobiol 2017
Times Cited: 11







List of co-cited articles
74 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Transcription-coupled DNA repair: two decades of progress and surprises.
Philip C Hanawalt, Graciela Spivak. Nat Rev Mol Cell Biol 2008
729
54

Structural basis for the initiation of eukaryotic transcription-coupled DNA repair.
Jun Xu, Indrajit Lahiri, Wei Wang, Adam Wier, Michael A Cianfrocco, Jenny Chong, Alissa A Hare, Peter B Dervan, Frank DiMaio, Andres E Leschziner,[...]. Nature 2017
107
54

Genome-wide analysis of human global and transcription-coupled excision repair of UV damage at single-nucleotide resolution.
Jinchuan Hu, Sheera Adar, Christopher P Selby, Jason D Lieb, Aziz Sancar. Genes Dev 2015
153
36


Transcription bypass of DNA lesions enhances cell survival but attenuates transcription coupled DNA repair.
Wentao Li, Kathiresan Selvam, Tengyu Ko, Shisheng Li. Nucleic Acids Res 2014
18
36

Sen1, the yeast homolog of human senataxin, plays a more direct role than Rad26 in transcription coupled DNA repair.
Wentao Li, Kathiresan Selvam, Sheikh A Rahman, Shisheng Li. Nucleic Acids Res 2016
17
36

Chromosomal landscape of UV damage formation and repair at single-nucleotide resolution.
Peng Mao, Michael J Smerdon, Steven A Roberts, John J Wyrick. Proc Natl Acad Sci U S A 2016
84
36





Nucleotide excision repair in human cells: fate of the excised oligonucleotide carrying DNA damage in vivo.
Jinchuan Hu, Jun-Hyuk Choi, Shobhan Gaddameedhi, Michael G Kemp, Joyce T Reardon, Aziz Sancar. J Biol Chem 2013
69
27

RNA polymerase II stalled at a thymine dimer: footprint and effect on excision repair.
C P Selby, R Drapkin, D Reinberg, A Sancar. Nucleic Acids Res 1997
148
27


Yeast Elc1 plays an important role in global genomic repair but not in transcription coupled repair.
Danielle Lejeune, Xuefeng Chen, Christine Ruggiero, Shannon Berryhill, Baojin Ding, Shisheng Li. DNA Repair (Amst) 2009
14
27

Genome-wide transcription-coupled repair in Escherichia coli is mediated by the Mfd translocase.
Ogun Adebali, Yi-Ying Chiou, Jinchuan Hu, Aziz Sancar, Christopher P Selby. Proc Natl Acad Sci U S A 2017
48
27


UV-Induced DNA Damage and Mutagenesis in Chromatin.
Peng Mao, John J Wyrick, Steven A Roberts, Michael J Smerdon. Photochem Photobiol 2017
48
27



A Genetic Map of the Response to DNA Damage in Human Cells.
Michele Olivieri, Tiffany Cho, Alejandro Álvarez-Quilón, Kejiao Li, Matthew J Schellenberg, Michal Zimmermann, Nicole Hustedt, Silvia Emma Rossi, Salomé Adam, Henrique Melo,[...]. Cell 2020
147
27

Identification and characterization of Elf1, a conserved transcription elongation factor in Saccharomyces cerevisiae.
Donald Prather, Nevan J Krogan, Andrew Emili, Jack F Greenblatt, Fred Winston. Mol Cell Biol 2005
52
27


UvrD facilitates DNA repair by pulling RNA polymerase backwards.
Vitaly Epshtein, Venu Kamarthapu, Katelyn McGary, Vladimir Svetlov, Beatrix Ueberheide, Sergey Proshkin, Alexander Mironov, Evgeny Nudler. Nature 2014
153
18

Comparative gene expression profiles following UV exposure in wild-type and SOS-deficient Escherichia coli.
J Courcelle, A Khodursky, B Peter, P O Brown, P C Hanawalt. Genetics 2001
585
18




Roles for the transcription elongation factor NusA in both DNA repair and damage tolerance pathways in Escherichia coli.
Susan E Cohen, Cindi A Lewis, Rachel A Mooney, Michael A Kohanski, James J Collins, Robert Landick, Graham C Walker. Proc Natl Acad Sci U S A 2010
69
18


BEDTools: The Swiss-Army Tool for Genome Feature Analysis.
Aaron R Quinlan. Curr Protoc Bioinformatics 2014
18


The unstructured C-terminal extension of UvrD interacts with UvrB, but is dispensable for nucleotide excision repair.
Laura Manelyte, Colin P Guy, Rachel M Smith, Mark S Dillingham, Peter McGlynn, Nigel J Savery. DNA Repair (Amst) 2009
44
18

Mfd Protein and Transcription-Repair Coupling in Escherichia coli.
Christopher P Selby. Photochem Photobiol 2017
38
18

Effect of DNA polymerase I and DNA helicase II on the turnover rate of UvrABC excision nuclease.
I Husain, B Van Houten, D C Thomas, M Abdel-Monem, A Sancar. Proc Natl Acad Sci U S A 1985
200
18

Cisplatin DNA damage and repair maps of the human genome at single-nucleotide resolution.
Jinchuan Hu, Jason D Lieb, Aziz Sancar, Sheera Adar. Proc Natl Acad Sci U S A 2016
100
18

Genome-wide analysis of factors affecting transcription elongation and DNA repair: a new role for PAF and Ccr4-not in transcription-coupled repair.
Hélène Gaillard, Cristina Tous, Javier Botet, Cristina González-Aguilera, Maria José Quintero, Laia Viladevall, María L García-Rubio, Alfonso Rodríguez-Gil, Antonio Marín, Joaquín Ariño,[...]. PLoS Genet 2009
68
18

The DNA damage response: making it safe to play with knives.
Alberto Ciccia, Stephen J Elledge. Mol Cell 2010
18

Understanding nucleotide excision repair and its roles in cancer and ageing.
Jurgen A Marteijn, Hannes Lans, Wim Vermeulen, Jan H J Hoeijmakers. Nat Rev Mol Cell Biol 2014
632
18

DNA repair and recovery of RNA synthesis following exposure to ultraviolet light are delayed in long genes.
Leonardo C Andrade-Lima, Artur Veloso, Michelle T Paulsen, Carlos F M Menck, Mats Ljungman. Nucleic Acids Res 2015
50
18

RNA polymerase II is released from the DNA template during transcription-coupled repair in mammalian cells.
Yi-Ying Chiou, Jinchuan Hu, Aziz Sancar, Christopher P Selby. J Biol Chem 2018
32
18

Genome-wide kinetics of DNA excision repair in relation to chromatin state and mutagenesis.
Sheera Adar, Jinchuan Hu, Jason D Lieb, Aziz Sancar. Proc Natl Acad Sci U S A 2016
107
18

Molecular mechanisms and genomic maps of DNA excision repair in Escherichia coli and humans.
Jinchuan Hu, Christopher P Selby, Sheera Adar, Ogun Adebali, Aziz Sancar. J Biol Chem 2017
47
18

Carcinogen susceptibility is regulated by genome architecture and predicts cancer mutagenesis.
Pablo E García-Nieto, Erin K Schwartz, Devin A King, Jonas Paulsen, Philippe Collas, Rafael E Herrera, Ashby J Morrison. EMBO J 2017
46
18


Altering the chromatin landscape for nucleotide excision repair.
Ronita Nag, Michael J Smerdon. Mutat Res 2009
26
18

Human genome-wide repair map of DNA damage caused by the cigarette smoke carcinogen benzo[a]pyrene.
Wentao Li, Jinchuan Hu, Ogun Adebali, Sheera Adar, Yanyan Yang, Yi-Ying Chiou, Aziz Sancar. Proc Natl Acad Sci U S A 2017
47
18

RNA polymerase: the most specific damage recognition protein in cellular responses to DNA damage?
Laura A Lindsey-Boltz, Aziz Sancar. Proc Natl Acad Sci U S A 2007
60
18




Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.