A citation-based method for searching scientific literature

James M Morrow, Savo Lazic, Monica Dixon Fox, Claire Kuo, Ryan K Schott, Eduardo de A Gutierrez, Francesco Santini, Vincent Tropepe, Belinda S W Chang. J Exp Biol 2017
Times Cited: 17







List of co-cited articles
183 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A novel rhodopsin-like gene expressed in zebrafish retina.
James M Morrow, Savo Lazic, Belinda S W Chang. Vis Neurosci 2011
33
52

Ancestral duplications and highly dynamic opsin gene evolution in percomorph fishes.
Fabio Cortesi, Zuzana Musilová, Sara M Stieb, Nathan S Hart, Ulrike E Siebeck, Martin Malmstrøm, Ole K Tørresen, Sissel Jentoft, Karen L Cheney, N Justin Marshall,[...]. Proc Natl Acad Sci U S A 2015
77
35

The molecular basis for spectral tuning of rod visual pigments in deep-sea fish.
D M Hunt, K S Dulai, J C Partridge, P Cottrill, J K Bowmaker. J Exp Biol 2001
94
29

Evolution of dim-light and color vision pigments.
Shozo Yokoyama. Annu Rev Genomics Hum Genet 2008
147
29

An extended family of novel vertebrate photopigments is widely expressed and displays a diversity of function.
Wayne I L Davies, T Katherine Tamai, Lei Zheng, Josephine K Fu, Jason Rihel, Russell G Foster, David Whitmore, Mark W Hankins. Genome Res 2015
66
29



The visual pigments of a deep-sea teleost, the pearl eye Scopelarchus analis.
Marie A Pointer, Livia S Carvalho, Jill A Cowing, James K Bowmaker, David M Hunt. J Exp Biol 2007
15
26


Elucidation of phenotypic adaptations: Molecular analyses of dim-light vision proteins in vertebrates.
Shozo Yokoyama, Takashi Tada, Huan Zhang, Lyle Britt. Proc Natl Acad Sci U S A 2008
162
23

Evolutionary changes of multiple visual pigment genes in the complete genome of Pacific bluefin tuna.
Yoji Nakamura, Kazuki Mori, Kenji Saitoh, Kenshiro Oshima, Miyuki Mekuchi, Takuma Sugaya, Yuya Shigenobu, Nobuhiko Ojima, Shigeru Muta, Atushi Fujiwara,[...]. Proc Natl Acad Sci U S A 2013
54
23

Molecular evolution of vertebrate visual pigments.
S Yokoyama. Prog Retin Eye Res 2000
366
23

Cyp27c1 Red-Shifts the Spectral Sensitivity of Photoreceptors by Converting Vitamin A1 into A2.
Jennifer M Enright, Matthew B Toomey, Shin-ya Sato, Shelby E Temple, James R Allen, Rina Fujiwara, Valerie M Kramlinger, Leslie D Nagy, Kevin M Johnson, Yi Xiao,[...]. Curr Biol 2015
74
23

The rhodopsin-encoding gene of bony fish lacks introns.
J Fitzgibbon, A Hope, S J Slobodyanyuk, J Bellingham, J K Bowmaker, D M Hunt. Gene 1995
58
23

Retinoic Acid Signaling Regulates Differential Expression of the Tandemly-Duplicated Long Wavelength-Sensitive Cone Opsin Genes in Zebrafish.
Diana M Mitchell, Craig B Stevens, Ruth A Frey, Samuel S Hunter, Ryuichi Ashino, Shoji Kawamura, Deborah L Stenkamp. PLoS Genet 2015
34
23


Cone photoreceptor types in zebrafish are generated by symmetric terminal divisions of dedicated precursors.
Sachihiro C Suzuki, Adam Bleckert, Philip R Williams, Masaki Takechi, Shoji Kawamura, Rachel O L Wong. Proc Natl Acad Sci U S A 2013
115
23


Ontogeny of cone photoreceptor mosaics in zebrafish.
W Ted Allison, Linda K Barthel, Kristina M Skebo, Masaki Takechi, Shoji Kawamura, Pamela A Raymond. J Comp Neurol 2010
87
23

Spectral tuning by opsin coexpression in retinal regions that view different parts of the visual field.
Brian E Dalton, Ellis R Loew, Thomas W Cronin, Karen L Carleton. Proc Biol Sci 2014
55
23

Gene duplication and spectral diversification of cone visual pigments of zebrafish.
Akito Chinen, Takanori Hamaoka, Yukihiro Yamada, Shoji Kawamura. Genetics 2003
190
23


Exo-rhodopsin: a novel rhodopsin expressed in the zebrafish pineal gland.
H Mano, D Kojima, Y Fukada. Brain Res Mol Brain Res 1999
97
17

Late changes in spliceosomal introns define clades in vertebrate evolution.
B Venkatesh, Y Ning, S Brenner. Proc Natl Acad Sci U S A 1999
136
17

Opsin gene duplication and divergence in ray-finned fish.
Diana J Rennison, Gregory L Owens, John S Taylor. Mol Phylogenet Evol 2012
69
17




Ensembl 2016.
Andrew Yates, Wasiu Akanni, M Ridwan Amode, Daniel Barrell, Konstantinos Billis, Denise Carvalho-Silva, Carla Cummins, Peter Clapham, Stephen Fitzgerald, Laurent Gil,[...]. Nucleic Acids Res 2016
983
17

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis.
Brian J Haas, Alexie Papanicolaou, Moran Yassour, Manfred Grabherr, Philip D Blood, Joshua Bowden, Matthew Brian Couger, David Eccles, Bo Li, Matthias Lieber,[...]. Nat Protoc 2013
17

Functional characterization, tuning, and regulation of visual pigment gene expression in an anadromous lamprey.
Wayne L Davies, Jill A Cowing, Livia S Carvalho, Ian C Potter, Ann E O Trezise, David M Hunt, Shaun P Collin. FASEB J 2007
57
17

In search of the visual pigment template.
V I Govardovskii, N Fyhrquist, T Reuter, D G Kuzmin, K Donner. Vis Neurosci 2000
630
17

Genomics Virtual Laboratory: A Practical Bioinformatics Workbench for the Cloud.
Enis Afgan, Clare Sloggett, Nuwan Goonasekera, Igor Makunin, Derek Benson, Mark Crowe, Simon Gladman, Yousef Kowsar, Michael Pheasant, Ron Horst,[...]. PLoS One 2015
61
17

Vision in the deep sea.
Eric J Warrant, N Adam Locket. Biol Rev Camb Philos Soc 2004
153
17

Spectral tuning in the eyes of deep-sea lanternfishes (Myctophidae): a novel sexually dimorphic intra-ocular filter.
Fanny de Busserolles, Nathan S Hart, David M Hunt, Wayne I Davies, N Justin Marshall, Michael W Clarke, Dorothee Hahne, Shaun P Collin. Brain Behav Evol 2015
11
27

The opsins.
Akihisa Terakita. Genome Biol 2005
298
17




Rapid and Parallel Adaptive Evolution of the Visual System of Neotropical Midas Cichlid Fishes.
Julián Torres-Dowdall, Michele E R Pierotti, Andreas Härer, Nidal Karagic, Joost M Woltering, Frederico Henning, Kathryn R Elmer, Axel Meyer. Mol Biol Evol 2017
36
17

Evolution of vertebrate visual pigments.
James K Bowmaker. Vision Res 2008
202
17

Regeneration of inner retinal neurons after intravitreal injection of ouabain in zebrafish.
Shane M Fimbel, Jacob E Montgomery, Christopher T Burket, David R Hyde. J Neurosci 2007
197
17

Cone survival despite rod degeneration in XOPS-mCFP transgenic zebrafish.
Ann C Morris, Eric H Schroeter, Joseph Bilotta, Rachel O L Wong, James M Fadool. Invest Ophthalmol Vis Sci 2005
66
17

Cilia - The sensory antennae in the eye.
Helen May-Simera, Kerstin Nagel-Wolfrum, Uwe Wolfrum. Prog Retin Eye Res 2017
66
17

The developmental sequence of gene expression within the rod photoreceptor lineage in embryonic zebrafish.
Steve M Nelson, Ruth A Frey, Sheri L Wardwell, Deborah L Stenkamp. Dev Dyn 2008
41
17

Late-stage neuronal progenitors in the retina are radial Müller glia that function as retinal stem cells.
Rebecca L Bernardos, Linda K Barthel, Jason R Meyers, Pamela A Raymond. J Neurosci 2007
399
17


Genetic evidence for shared mechanisms of epimorphic regeneration in zebrafish.
Zhao Qin, Linda K Barthel, Pamela A Raymond. Proc Natl Acad Sci U S A 2009
98
17




Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.