A citation-based method for searching scientific literature

Seok-Jo Kim, Paul Cheresh, Renea P Jablonski, Luisa Morales-Nebreda, Yuan Cheng, Erin Hogan, Anjana Yeldandi, Monica Chi, Raul Piseaux, Karen Ridge, C Michael Hart, Navdeep Chandel, G R Scott Budinger, David W Kamp. Free Radic Biol Med 2016
Times Cited: 40







List of co-cited articles
680 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Epithelial cell mitochondrial dysfunction and PINK1 are induced by transforming growth factor-beta1 in pulmonary fibrosis.
Avignat S Patel, Jin Woo Song, Sarah G Chu, Kenji Mizumura, Juan C Osorio, Ying Shi, Souheil El-Chemaly, Chun Geun Lee, Ivan O Rosas, Jack A Elias,[...]. PLoS One 2015
105
60

PINK1 deficiency impairs mitochondrial homeostasis and promotes lung fibrosis.
Marta Bueno, Yen-Chun Lai, Yair Romero, Judith Brands, Claudette M St Croix, Christelle Kamga, Catherine Corey, Jose D Herazo-Maya, John Sembrat, Janet S Lee,[...]. J Clin Invest 2015
264
52

Mitochondria in the spotlight of aging and idiopathic pulmonary fibrosis.
Ana L Mora, Marta Bueno, Mauricio Rojas. J Clin Invest 2017
98
40

Extracellular Mitochondrial DNA Is Generated by Fibroblasts and Predicts Death in Idiopathic Pulmonary Fibrosis.
Changwan Ryu, Huanxing Sun, Mridu Gulati, Jose D Herazo-Maya, Yonglin Chen, Awo Osafo-Addo, Caitlin Brandsdorfer, Julia Winkler, Christina Blaul, Jaden Faunce,[...]. Am J Respir Crit Care Med 2017
80
37

The Role of Mitochondrial DNA in Mediating Alveolar Epithelial Cell Apoptosis and Pulmonary Fibrosis.
Seok-Jo Kim, Paul Cheresh, Renea P Jablonski, David B Williams, David W Kamp. Int J Mol Sci 2015
54
35

Mitochondria-targeted Ogg1 and aconitase-2 prevent oxidant-induced mitochondrial DNA damage in alveolar epithelial cells.
Seok-Jo Kim, Paul Cheresh, David Williams, Yuan Cheng, Karen Ridge, Paul T Schumacker, Sigmund Weitzman, Vilhelm A Bohr, David W Kamp. J Biol Chem 2014
60
35

Macrophage Akt1 Kinase-Mediated Mitophagy Modulates Apoptosis Resistance and Pulmonary Fibrosis.
Jennifer L Larson-Casey, Jessy S Deshane, Alan J Ryan, Victor J Thannickal, A Brent Carter. Immunity 2016
160
32

Asbestos-induced pulmonary fibrosis is augmented in 8-oxoguanine DNA glycosylase knockout mice.
Paul Cheresh, Luisa Morales-Nebreda, Seok-Jo Kim, Anjana Yeldandi, David B Williams, Yuan Cheng, Gökhan M Mutlu, G R Scott Budinger, Karen Ridge, Paul T Schumacker,[...]. Am J Respir Cell Mol Biol 2015
31
38

Involvement of PARK2-Mediated Mitophagy in Idiopathic Pulmonary Fibrosis Pathogenesis.
Kenji Kobayashi, Jun Araya, Shunsuke Minagawa, Hiromichi Hara, Nayuta Saito, Tsukasa Kadota, Nahoko Sato, Masahiro Yoshida, Kazuya Tsubouchi, Yusuke Kurita,[...]. J Immunol 2016
63
30

SIRT3 deficiency promotes lung fibrosis by augmenting alveolar epithelial cell mitochondrial DNA damage and apoptosis.
Renea P Jablonski, Seok-Jo Kim, Paul Cheresh, David B Williams, Luisa Morales-Nebreda, Yuan Cheng, Anjana Yeldandi, Sangeeta Bhorade, Annie Pardo, Moises Selman,[...]. FASEB J 2017
59
30

Epithelial endoplasmic reticulum stress and apoptosis in sporadic idiopathic pulmonary fibrosis.
Martina Korfei, Clemens Ruppert, Poornima Mahavadi, Ingrid Henneke, Philipp Markart, Miriam Koch, Gyoergy Lang, Ludger Fink, Rainer-Maria Bohle, Werner Seeger,[...]. Am J Respir Crit Care Med 2008
335
27

Single-cell RNA sequencing identifies diverse roles of epithelial cells in idiopathic pulmonary fibrosis.
Yan Xu, Takako Mizuno, Anusha Sridharan, Yina Du, Minzhe Guo, Jie Tang, Kathryn A Wikenheiser-Brokamp, Anne-Karina T Perl, Vincent A Funari, Jason J Gokey,[...]. JCI Insight 2016
249
27

Thyroid hormone inhibits lung fibrosis in mice by improving epithelial mitochondrial function.
Guoying Yu, Argyris Tzouvelekis, Rong Wang, Jose D Herazo-Maya, Gabriel H Ibarra, Anup Srivastava, Joao Pedro Werneck de Castro, Giuseppe DeIuliis, Farida Ahangari, Tony Woolard,[...]. Nat Med 2018
132
27

Deregulation of selective autophagy during aging and pulmonary fibrosis: the role of TGFβ1.
Meredith L Sosulski, Rafael Gongora, Svitlana Danchuk, Chunmin Dong, Fayong Luo, Cecilia G Sanchez. Aging Cell 2015
97
25

The hallmarks of aging.
Carlos López-Otín, Maria A Blasco, Linda Partridge, Manuel Serrano, Guido Kroemer. Cell 2013
25

SIRT3 Blocks Aging-Associated Tissue Fibrosis in Mice by Deacetylating and Activating Glycogen Synthase Kinase 3β.
Nagalingam R Sundaresan, Samik Bindu, Vinodkumar B Pillai, Sadhana Samant, Yong Pan, Jing-Yi Huang, Madhu Gupta, Raghu S Nagalingam, Donald Wolfgeher, Eric Verdin,[...]. Mol Cell Biol 2015
107
25

IPF lung fibroblasts have a senescent phenotype.
Diana Álvarez, Nayra Cárdenes, Jacobo Sellarés, Marta Bueno, Catherine Corey, Vidya Sagar Hanumanthu, Yating Peng, Hannah D'Cunha, John Sembrat, Mehdi Nouraie,[...]. Am J Physiol Lung Cell Mol Physiol 2017
117
25

Cellular senescence mediates fibrotic pulmonary disease.
Marissa J Schafer, Thomas A White, Koji Iijima, Andrew J Haak, Giovanni Ligresti, Elizabeth J Atkinson, Ann L Oberg, Jodie Birch, Hanna Salmonowicz, Yi Zhu,[...]. Nat Commun 2017
499
25

Senolytic drugs target alveolar epithelial cell function and attenuate experimental lung fibrosis ex vivo.
Mareike Lehmann, Martina Korfei, Kathrin Mutze, Stephan Klee, Wioletta Skronska-Wasek, Hani N Alsafadi, Chiharu Ota, Rita Costa, Herbert B Schiller, Michael Lindner,[...]. Eur Respir J 2017
150
25

ATF3 represses PINK1 gene transcription in lung epithelial cells to control mitochondrial homeostasis.
Marta Bueno, Judith Brands, Lauren Voltz, Kaitlin Fiedler, Brenton Mays, Claudette St Croix, John Sembrat, Rama K Mallampalli, Mauricio Rojas, Ana L Mora. Aging Cell 2018
48
25

NADPH oxidase-4 mediates myofibroblast activation and fibrogenic responses to lung injury.
Louise Hecker, Ragini Vittal, Tamara Jones, Rajesh Jagirdar, Tracy R Luckhardt, Jeffrey C Horowitz, Subramaniam Pennathur, Fernando J Martinez, Victor J Thannickal. Nat Med 2009
567
25

Mitochondrial reactive oxygen species regulate transforming growth factor-β signaling.
Manu Jain, Stephanie Rivera, Elena A Monclus, Lauren Synenki, Aaron Zirk, James Eisenbart, Carol Feghali-Bostwick, Gokhan M Mutlu, G R Scott Budinger, Navdeep S Chandel. J Biol Chem 2013
205
22

NADPH Oxidase 4 (Nox4) Suppresses Mitochondrial Biogenesis and Bioenergetics in Lung Fibroblasts via a Nuclear Factor Erythroid-derived 2-like 2 (Nrf2)-dependent Pathway.
Karen Bernard, Naomi J Logsdon, Veronica Miguel, Gloria A Benavides, Jianhua Zhang, A Brent Carter, Victor M Darley-Usmar, Victor J Thannickal. J Biol Chem 2017
59
22

Reversal of persistent fibrosis in aging by targeting Nox4-Nrf2 redox imbalance.
Louise Hecker, Naomi J Logsdon, Deepali Kurundkar, Ashish Kurundkar, Karen Bernard, Thomas Hock, Eric Meldrum, Yan Y Sanders, Victor J Thannickal. Sci Transl Med 2014
372
20

Sirtuin 3 Deregulation Promotes Pulmonary Fibrosis.
Meredith L Sosulski, Rafael Gongora, Carol Feghali-Bostwick, Joseph A Lasky, Cecilia G Sanchez. J Gerontol A Biol Sci Med Sci 2017
56
20


Idiopathic pulmonary fibrosis.
Fernando J Martinez, Harold R Collard, Annie Pardo, Ganesh Raghu, Luca Richeldi, Moises Selman, Jeffrey J Swigris, Hiroyuki Taniguchi, Athol U Wells. Nat Rev Dis Primers 2017
294
20

Mitochondrial Dysfunction in Pulmonary Fibrosis.
Sunad Rangarajan, Karen Bernard, Victor J Thannickal. Ann Am Thorac Soc 2017
31
25

Mitophagy-dependent necroptosis contributes to the pathogenesis of COPD.
Kenji Mizumura, Suzanne M Cloonan, Kiichi Nakahira, Abhiram R Bhashyam, Morgan Cervo, Tohru Kitada, Kimberly Glass, Caroline A Owen, Ashfaq Mahmood, George R Washko,[...]. J Clin Invest 2014
292
17

Accelerated epithelial cell senescence in IPF and the inhibitory role of SIRT6 in TGF-β-induced senescence of human bronchial epithelial cells.
Shunsuke Minagawa, Jun Araya, Takanori Numata, Satoko Nojiri, Hiromichi Hara, Yoko Yumino, Makoto Kawaishi, Makoto Odaka, Toshiaki Morikawa, Stephen L Nishimura,[...]. Am J Physiol Lung Cell Mol Physiol 2011
183
17

Interaction of Sirt3 with OGG1 contributes to repair of mitochondrial DNA and protects from apoptotic cell death under oxidative stress.
Y Cheng, X Ren, A S P Gowda, Y Shan, L Zhang, Y-S Yuan, R Patel, H Wu, K Huber-Keener, J W Yang,[...]. Cell Death Dis 2013
115
17

Endoplasmic reticulum stress in alveolar epithelial cells is prominent in IPF: association with altered surfactant protein processing and herpesvirus infection.
William E Lawson, Peter F Crossno, Vasiliy V Polosukhin, Juan Roldan, Dong-Sheng Cheng, Kirk B Lane, Thomas R Blackwell, Carol Xu, Cheryl Markin, Lorraine B Ware,[...]. Am J Physiol Lung Cell Mol Physiol 2008
284
17

SIRT3 is attenuated in systemic sclerosis skin and lungs, and its pharmacologic activation mitigates organ fibrosis.
Kaname Akamata, Jun Wei, Mitra Bhattacharyya, Paul Cheresh, Michael Y Bonner, Jack L Arbiser, Kirtee Raparia, Mahesh P Gupta, David W Kamp, John Varga. Oncotarget 2016
59
17

Role of mitochondrial hOGG1 and aconitase in oxidant-induced lung epithelial cell apoptosis.
V Panduri, G Liu, S Surapureddi, J Kondapalli, S Soberanes, N C de Souza-Pinto, V A Bohr, G R S Budinger, P T Schumacker, S A Weitzman,[...]. Free Radic Biol Med 2009
57
17

An official ATS/ERS/JRS/ALAT statement: idiopathic pulmonary fibrosis: evidence-based guidelines for diagnosis and management.
Ganesh Raghu, Harold R Collard, Jim J Egan, Fernando J Martinez, Juergen Behr, Kevin K Brown, Thomas V Colby, Jean-François Cordier, Kevin R Flaherty, Joseph A Lasky,[...]. Am J Respir Crit Care Med 2011
17


SIRT3 blocks myofibroblast differentiation and pulmonary fibrosis by preventing mitochondrial DNA damage.
Samik Bindu, Vinodkumar B Pillai, Abhinav Kanwal, Sadhana Samant, Gökhan M Mutlu, Eric Verdin, Nickolai Dulin, Mahesh P Gupta. Am J Physiol Lung Cell Mol Physiol 2017
47
17

Idiopathic pulmonary fibrosis.
Talmadge E King, Annie Pardo, Moisés Selman. Lancet 2011
17

Alveolar epithelial cell mesenchymal transition develops in vivo during pulmonary fibrosis and is regulated by the extracellular matrix.
Kevin K Kim, Matthias C Kugler, Paul J Wolters, Liliane Robillard, Michael G Galvez, Alexis N Brumwell, Dean Sheppard, Harold A Chapman. Proc Natl Acad Sci U S A 2006
891
17


Metformin reverses established lung fibrosis in a bleomycin model.
Sunad Rangarajan, Nathaniel B Bone, Anna A Zmijewska, Shaoning Jiang, Dae Won Park, Karen Bernard, Morgan L Locy, Saranya Ravi, Jessy Deshane, Roslyn B Mannon,[...]. Nat Med 2018
180
17

Idiopathic Pulmonary Fibrosis: Aging, Mitochondrial Dysfunction, and Cellular Bioenergetics.
Daniel C Zank, Marta Bueno, Ana L Mora, Mauricio Rojas. Front Med (Lausanne) 2018
71
17

Targeted injury of type II alveolar epithelial cells induces pulmonary fibrosis.
Thomas H Sisson, Michael Mendez, Karen Choi, Natalya Subbotina, Anthony Courey, Andrew Cunningham, Aditi Dave, John F Engelhardt, Xiaoming Liu, Eric S White,[...]. Am J Respir Crit Care Med 2010
289
17

Short telomeres are a risk factor for idiopathic pulmonary fibrosis.
Jonathan K Alder, Julian J-L Chen, Lisa Lancaster, Sonye Danoff, Shu-chih Su, Joy D Cogan, Irma Vulto, Mingyi Xie, Xiaodong Qi, Rubin M Tuder,[...]. Proc Natl Acad Sci U S A 2008
464
15

Histone deacetylase inhibition promotes fibroblast apoptosis and ameliorates pulmonary fibrosis in mice.
Yan Y Sanders, James S Hagood, Hui Liu, Wei Zhang, Namasivayam Ambalavanan, Victor J Thannickal. Eur Respir J 2014
85
15

Telomere shortening in familial and sporadic pulmonary fibrosis.
Jennifer T Cronkhite, Chao Xing, Ganesh Raghu, Kelly M Chin, Fernando Torres, Randall L Rosenblatt, Christine Kim Garcia. Am J Respir Crit Care Med 2008
318
15

Mice with Pulmonary Fibrosis Driven by Telomere Dysfunction.
Juan M Povedano, Paula Martinez, Juana M Flores, Francisca Mulero, Maria A Blasco. Cell Rep 2015
118
15

Incidence and prevalence of idiopathic pulmonary fibrosis.
Ganesh Raghu, Derek Weycker, John Edelsberg, Williamson Z Bradford, Gerry Oster. Am J Respir Crit Care Med 2006
791
15

Adult-onset pulmonary fibrosis caused by mutations in telomerase.
Kalliopi D Tsakiri, Jennifer T Cronkhite, Phillip J Kuan, Chao Xing, Ganesh Raghu, Jonathan C Weissler, Randall L Rosenblatt, Jerry W Shay, Christine Kim Garcia. Proc Natl Acad Sci U S A 2007
562
15

Cellular senescence-like features of lung fibroblasts derived from idiopathic pulmonary fibrosis patients.
Hagai Yanai, Albert Shteinberg, Ziv Porat, Arie Budovsky, Alex Braiman, Rolf Ziesche, Vadim E Fraifeld. Aging (Albany NY) 2015
89
15


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.