A citation-based method for searching scientific literature

Rob J W Arts, Boris Novakovic, Rob Ter Horst, Agostinho Carvalho, Siroon Bekkering, Ekta Lachmandas, Fernando Rodrigues, Ricardo Silvestre, Shih-Chin Cheng, Shuang-Yin Wang, Ehsan Habibi, Luís G Gonçalves, Inês Mesquita, Cristina Cunha, Arjan van Laarhoven, Frank L van de Veerdonk, David L Williams, Jos W M van der Meer, Colin Logie, Luke A O'Neill, Charles A Dinarello, Niels P Riksen, Reinout van Crevel, Clary Clish, Richard A Notebaart, Leo A B Joosten, Hendrik G Stunnenberg, Ramnik J Xavier, Mihai G Netea. Cell Metab 2016
Times Cited: 313







List of co-cited articles
1058 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


mTOR- and HIF-1α-mediated aerobic glycolysis as metabolic basis for trained immunity.
Shih-Chin Cheng, Jessica Quintin, Robert A Cramer, Kelly M Shepardson, Sadia Saeed, Vinod Kumar, Evangelos J Giamarellos-Bourboulis, Joost H A Martens, Nagesha Appukudige Rao, Ali Aghajanirefah,[...]. Science 2014
847
55

Succinate is an inflammatory signal that induces IL-1β through HIF-1α.
G M Tannahill, A M Curtis, J Adamik, E M Palsson-McDermott, A F McGettrick, G Goel, C Frezza, N J Bernard, B Kelly, N H Foley,[...]. Nature 2013
37

Bacille Calmette-Guerin induces NOD2-dependent nonspecific protection from reinfection via epigenetic reprogramming of monocytes.
Johanneke Kleinnijenhuis, Jessica Quintin, Frank Preijers, Leo A B Joosten, Daniela C Ifrim, Sadia Saeed, Cor Jacobs, Joke van Loenhout, Dirk de Jong, Hendrik G Stunnenberg,[...]. Proc Natl Acad Sci U S A 2012
756
36

Epigenetic programming of monocyte-to-macrophage differentiation and trained innate immunity.
Sadia Saeed, Jessica Quintin, Hindrik H D Kerstens, Nagesha A Rao, Ali Aghajanirefah, Filomena Matarese, Shih-Chin Cheng, Jacqueline Ratter, Kim Berentsen, Martijn A van der Ent,[...]. Science 2014
742
34

Defining trained immunity and its role in health and disease.
Mihai G Netea, Jorge Domínguez-Andrés, Luis B Barreiro, Triantafyllos Chavakis, Maziar Divangahi, Elaine Fuchs, Leo A B Joosten, Jos W M van der Meer, Musa M Mhlanga, Willem J M Mulder,[...]. Nat Rev Immunol 2020
337
34

Trained immunity: A program of innate immune memory in health and disease.
Mihai G Netea, Leo A B Joosten, Eicke Latz, Kingston H G Mills, Gioacchino Natoli, Hendrik G Stunnenberg, Luke A J O'Neill, Ramnik J Xavier. Science 2016
982
32

Candida albicans infection affords protection against reinfection via functional reprogramming of monocytes.
Jessica Quintin, Sadia Saeed, Joost H A Martens, Evangelos J Giamarellos-Bourboulis, Daniela C Ifrim, Colin Logie, Liesbeth Jacobs, Trees Jansen, Bart-Jan Kullberg, Cisca Wijmenga,[...]. Cell Host Microbe 2012
537
32

Modulation of Myelopoiesis Progenitors Is an Integral Component of Trained Immunity.
Ioannis Mitroulis, Klara Ruppova, Baomei Wang, Lan-Sun Chen, Michal Grzybek, Tatyana Grinenko, Anne Eugster, Maria Troullinaki, Alessandra Palladini, Ioannis Kourtzelis,[...]. Cell 2018
348
31

Metabolic Induction of Trained Immunity through the Mevalonate Pathway.
Siroon Bekkering, Rob J W Arts, Boris Novakovic, Ioannis Kourtzelis, Charlotte D C C van der Heijden, Yang Li, Calin D Popa, Rob Ter Horst, Julia van Tuijl, Romana T Netea-Maier,[...]. Cell 2018
236
30

Immunometabolic Pathways in BCG-Induced Trained Immunity.
Rob J W Arts, Agostinho Carvalho, Claudia La Rocca, Carla Palma, Fernando Rodrigues, Ricardo Silvestre, Johanneke Kleinnijenhuis, Ekta Lachmandas, Luís G Gonçalves, Ana Belinha,[...]. Cell Rep 2016
231
30

BCG Educates Hematopoietic Stem Cells to Generate Protective Innate Immunity against Tuberculosis.
Eva Kaufmann, Joaquin Sanz, Jonathan L Dunn, Nargis Khan, Laura E Mendonça, Alain Pacis, Fanny Tzelepis, Erwan Pernet, Anne Dumaine, Jean-Christophe Grenier,[...]. Cell 2018
376
29

Network integration of parallel metabolic and transcriptional data reveals metabolic modules that regulate macrophage polarization.
Abhishek K Jha, Stanley Ching-Cheng Huang, Alexey Sergushichev, Vicky Lampropoulou, Yulia Ivanova, Ekaterina Loginicheva, Karina Chmielewski, Kelly M Stewart, Juliet Ashall, Bart Everts,[...]. Immunity 2015
759
26

Trained immunity: a memory for innate host defense.
Mihai G Netea, Jessica Quintin, Jos W M van der Meer. Cell Host Microbe 2011
643
26

BCG Vaccination Protects against Experimental Viral Infection in Humans through the Induction of Cytokines Associated with Trained Immunity.
Rob J W Arts, Simone J C F M Moorlag, Boris Novakovic, Yang Li, Shuang-Yin Wang, Marije Oosting, Vinod Kumar, Ramnik J Xavier, Cisca Wijmenga, Leo A B Joosten,[...]. Cell Host Microbe 2018
416
25

β-Glucan Reverses the Epigenetic State of LPS-Induced Immunological Tolerance.
Boris Novakovic, Ehsan Habibi, Shuang-Yin Wang, Rob J W Arts, Robab Davar, Wout Megchelenbrink, Bowon Kim, Tatyana Kuznetsova, Matthijs Kox, Jelle Zwaag,[...]. Cell 2016
223
22

A guide to immunometabolism for immunologists.
Luke A J O'Neill, Rigel J Kishton, Jeff Rathmell. Nat Rev Immunol 2016
22

Oxidized low-density lipoprotein induces long-term proinflammatory cytokine production and foam cell formation via epigenetic reprogramming of monocytes.
Siroon Bekkering, Jessica Quintin, Leo A B Joosten, Jos W M van der Meer, Mihai G Netea, Niels P Riksen. Arterioscler Thromb Vasc Biol 2014
249
21

Itaconate is an anti-inflammatory metabolite that activates Nrf2 via alkylation of KEAP1.
Evanna L Mills, Dylan G Ryan, Hiran A Prag, Dina Dikovskaya, Deepthi Menon, Zbigniew Zaslona, Mark P Jedrychowski, Ana S H Costa, Maureen Higgins, Emily Hams,[...]. Nature 2018
466
21

Itaconate Links Inhibition of Succinate Dehydrogenase with Macrophage Metabolic Remodeling and Regulation of Inflammation.
Vicky Lampropoulou, Alexey Sergushichev, Monika Bambouskova, Sharmila Nair, Emma E Vincent, Ekaterina Loginicheva, Luisa Cervantes-Barragan, Xiucui Ma, Stanley Ching-Cheng Huang, Takla Griss,[...]. Cell Metab 2016
466
21

Western Diet Triggers NLRP3-Dependent Innate Immune Reprogramming.
Anette Christ, Patrick Günther, Mario A R Lauterbach, Peter Duewell, Debjani Biswas, Karin Pelka, Claus J Scholz, Marije Oosting, Kristian Haendler, Kevin Baßler,[...]. Cell 2018
349
20

α-ketoglutarate orchestrates macrophage activation through metabolic and epigenetic reprogramming.
Pu-Ste Liu, Haiping Wang, Xiaoyun Li, Tung Chao, Tony Teav, Stefan Christen, Giusy Di Conza, Wan-Chen Cheng, Chih-Hung Chou, Magdalena Vavakova,[...]. Nat Immunol 2017
287
20

The Itaconate Pathway Is a Central Regulatory Node Linking Innate Immune Tolerance and Trained Immunity.
Jorge Domínguez-Andrés, Boris Novakovic, Yang Li, Brendon P Scicluna, Mark S Gresnigt, Rob J W Arts, Marije Oosting, Simone J C F M Moorlag, Laszlo A Groh, Jelle Zwaag,[...]. Cell Metab 2019
105
18

BCG Vaccination in Humans Elicits Trained Immunity via the Hematopoietic Progenitor Compartment.
Branko Cirovic, L Charlotte J de Bree, Laszlo Groh, Bas A Blok, Joyce Chan, Walter J F M van der Velden, M E J Bremmers, Reinout van Crevel, Kristian Händler, Simone Picelli,[...]. Cell Host Microbe 2020
80
22

Long-lasting effects of BCG vaccination on both heterologous Th1/Th17 responses and innate trained immunity.
Johanneke Kleinnijenhuis, Jessica Quintin, Frank Preijers, Christine Stabell Benn, Leo A B Joosten, Cor Jacobs, Joke van Loenhout, Ramnik J Xavier, Peter Aaby, Jos W M van der Meer,[...]. J Innate Immun 2014
267
17

BCG-induced trained immunity in NK cells: Role for non-specific protection to infection.
Johanneke Kleinnijenhuis, Jessica Quintin, Frank Preijers, Leo A B Joosten, Cor Jacobs, Ramnik J Xavier, Jos W M van der Meer, Reinout van Crevel, Mihai G Netea. Clin Immunol 2014
194
16

In Vitro Experimental Model of Trained Innate Immunity in Human Primary Monocytes.
Siroon Bekkering, Bastiaan A Blok, Leo A B Joosten, Niels P Riksen, Reinout van Crevel, Mihai G Netea. Clin Vaccine Immunol 2016
121
15

Electrophilic properties of itaconate and derivatives regulate the IκBζ-ATF3 inflammatory axis.
Monika Bambouskova, Laurent Gorvel, Vicky Lampropoulou, Alexey Sergushichev, Ekaterina Loginicheva, Kendall Johnson, Daniel Korenfeld, Mary Elizabeth Mathyer, Hyeryun Kim, Li-Hao Huang,[...]. Nature 2018
207
15

Succinate Dehydrogenase Supports Metabolic Repurposing of Mitochondria to Drive Inflammatory Macrophages.
Evanna L Mills, Beth Kelly, Angela Logan, Ana S H Costa, Mukund Varma, Clare E Bryant, Panagiotis Tourlomousis, J Henry M Däbritz, Eyal Gottlieb, Isabel Latorre,[...]. Cell 2016
716
15

Therapeutic targeting of trained immunity.
Willem J M Mulder, Jordi Ochando, Leo A B Joosten, Zahi A Fayad, Mihai G Netea. Nat Rev Drug Discov 2019
120
15

Epigenetics and Trained Immunity.
Charlotte D C C van der Heijden, Marlies P Noz, Leo A B Joosten, Mihai G Netea, Niels P Riksen, Samuel T Keating. Antioxid Redox Signal 2018
84
16

Trained Immunity: a Tool for Reducing Susceptibility to and the Severity of SARS-CoV-2 Infection.
Mihai G Netea, Evangelos J Giamarellos-Bourboulis, Jorge Domínguez-Andrés, Nigel Curtis, Reinout van Crevel, Frank L van de Veerdonk, Marc Bonten. Cell 2020
163
14

Immune-responsive gene 1 protein links metabolism to immunity by catalyzing itaconic acid production.
Alessandro Michelucci, Thekla Cordes, Jenny Ghelfi, Arnaud Pailot, Norbert Reiling, Oliver Goldmann, Tina Binz, André Wegner, Aravind Tallam, Antonio Rausell,[...]. Proc Natl Acad Sci U S A 2013
426
13

Immune genes are primed for robust transcription by proximal long noncoding RNAs located in nuclear compartments.
Stephanie Fanucchi, Ezio T Fok, Emiliano Dalla, Youtaro Shibayama, Kathleen Börner, Erin Y Chang, Stoyan Stoychev, Maxim Imakaev, Dirk Grimm, Kevin C Wang,[...]. Nat Genet 2019
80
16

Immunometabolic circuits in trained immunity.
Rob J W Arts, Leo A B Joosten, Mihai G Netea. Semin Immunol 2016
90
13

ATP-citrate lyase links cellular metabolism to histone acetylation.
Kathryn E Wellen, Georgia Hatzivassiliou, Uma M Sachdeva, Thi V Bui, Justin R Cross, Craig B Thompson. Science 2009
12

The Set7 Lysine Methyltransferase Regulates Plasticity in Oxidative Phosphorylation Necessary for Trained Immunity Induced by β-Glucan.
Samuel T Keating, Laszlo Groh, Charlotte D C C van der Heijden, Hanah Rodriguez, Jéssica C Dos Santos, Stephanie Fanucchi, Jun Okabe, Harikrishnan Kaipananickal, Jelmer H van Puffelen, Leonie Helder,[...]. Cell Rep 2020
19
63

Induction of Autonomous Memory Alveolar Macrophages Requires T Cell Help and Is Critical to Trained Immunity.
Yushi Yao, Mangalakumari Jeyanathan, Siamak Haddadi, Nicole G Barra, Maryam Vaseghi-Shanjani, Daniela Damjanovic, Rocky Lai, Sam Afkhami, Yonghong Chen, Anna Dvorkin-Gheva,[...]. Cell 2018
125
11

Innate immune cell activation and epigenetic remodeling in symptomatic and asymptomatic atherosclerosis in humans in vivo.
Siroon Bekkering, Inge van den Munckhof, Tim Nielen, Evert Lamfers, Charles Dinarello, Joost Rutten, Jacqueline de Graaf, Leo A B Joosten, Mihai G Netea, Marc E R Gomes,[...]. Atherosclerosis 2016
85
12

TLR-driven early glycolytic reprogramming via the kinases TBK1-IKKɛ supports the anabolic demands of dendritic cell activation.
Bart Everts, Eyal Amiel, Stanley Ching-Cheng Huang, Amber M Smith, Chih-Hao Chang, Wing Y Lam, Veronika Redmann, Tori C Freitas, Julianna Blagih, Gerritje J W van der Windt,[...]. Nat Immunol 2014
540
11

Innate immune memory in the brain shapes neurological disease hallmarks.
Ann-Christin Wendeln, Karoline Degenhardt, Lalit Kaurani, Michael Gertig, Thomas Ulas, Gaurav Jain, Jessica Wagner, Lisa M Häsler, Katleen Wild, Angelos Skodras,[...]. Nature 2018
310
11

Immunoresponsive Gene 1 and Itaconate Inhibit Succinate Dehydrogenase to Modulate Intracellular Succinate Levels.
Thekla Cordes, Martina Wallace, Alessandro Michelucci, Ajit S Divakaruni, Sean C Sapcariu, Carole Sousa, Haruhiko Koseki, Pedro Cabrales, Anne N Murphy, Karsten Hiller,[...]. J Biol Chem 2016
187
11

Oxidized Phospholipids on Lipoprotein(a) Elicit Arterial Wall Inflammation and an Inflammatory Monocyte Response in Humans.
Fleur M van der Valk, Siroon Bekkering, Jeffrey Kroon, Calvin Yeang, Jan Van den Bossche, Jaap D van Buul, Amir Ravandi, Aart J Nederveen, Hein J Verberne, Corey Scipione,[...]. Circulation 2016
200
10

Inflammatory memory sensitizes skin epithelial stem cells to tissue damage.
Shruti Naik, Samantha B Larsen, Nicholas C Gomez, Kirill Alaverdyan, Ataman Sendoel, Shaopeng Yuan, Lisa Polak, Anita Kulukian, Sophia Chai, Elaine Fuchs. Nature 2017
195
10


Inhibition of α-KG-dependent histone and DNA demethylases by fumarate and succinate that are accumulated in mutations of FH and SDH tumor suppressors.
Mengtao Xiao, Hui Yang, Wei Xu, Shenghong Ma, Huaipeng Lin, Honguang Zhu, Lixia Liu, Ying Liu, Chen Yang, Yanhui Xu,[...]. Genes Dev 2012
557
10

Akt-mTORC1 signaling regulates Acly to integrate metabolic input to control of macrophage activation.
Anthony J Covarrubias, Halil Ibrahim Aksoylar, Jiujiu Yu, Nathaniel W Snyder, Andrew J Worth, Shankar S Iyer, Jiawei Wang, Issam Ben-Sahra, Vanessa Byles, Tiffany Polynne-Stapornkul,[...]. Elife 2016
204
10

Krebs Cycle Reborn in Macrophage Immunometabolism.
Dylan G Ryan, Luke A J O'Neill. Annu Rev Immunol 2020
52
19

Pyruvate kinase M2 regulates Hif-1α activity and IL-1β induction and is a critical determinant of the warburg effect in LPS-activated macrophages.
Eva M Palsson-McDermott, Anne M Curtis, Gautam Goel, Mario A R Lauterbach, Frederick J Sheedy, Laura E Gleeson, Mirjam W M van den Bosch, Susan R Quinn, Raquel Domingo-Fernandez, Daniel G W Johnston,[...]. Cell Metab 2015
469
10

Gene-specific control of inflammation by TLR-induced chromatin modifications.
Simmie L Foster, Diana C Hargreaves, Ruslan Medzhitov. Nature 2007
809
10

Cell-intrinsic lysosomal lipolysis is essential for alternative activation of macrophages.
Stanley Ching-Cheng Huang, Bart Everts, Yulia Ivanova, David O'Sullivan, Marcia Nascimento, Amber M Smith, Wandy Beatty, Latisha Love-Gregory, Wing Y Lam, Christina M O'Neill,[...]. Nat Immunol 2014
550
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.