A citation-based method for searching scientific literature

Jianhai Du, Aya Yanagida, Kaitlen Knight, Abbi L Engel, Anh Huan Vo, Connor Jankowski, Martin Sadilek, Van Thi Bao Tran, Megan A Manson, Aravind Ramakrishnan, James B Hurley, Jennifer R Chao. Proc Natl Acad Sci U S A 2016
Times Cited: 63







List of co-cited articles
452 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Biochemical adaptations of the retina and retinal pigment epithelium support a metabolic ecosystem in the vertebrate eye.
Mark A Kanow, Michelle M Giarmarco, Connor Sr Jankowski, Kristine Tsantilas, Abbi L Engel, Jianhai Du, Jonathan D Linton, Christopher C Farnsworth, Stephanie R Sloat, Austin Rountree,[...]. Elife 2017
162
47

Glucose, lactate, and shuttling of metabolites in vertebrate retinas.
James B Hurley, Kenneth J Lindsay, Jianhai Du. J Neurosci Res 2015
135
28

mTOR-mediated dedifferentiation of the retinal pigment epithelium initiates photoreceptor degeneration in mice.
Chen Zhao, Douglas Yasumura, Xiyan Li, Michael Matthes, Marcia Lloyd, Gregory Nielsen, Kelly Ahern, Michael Snyder, Dean Bok, Joshua L Dunaief,[...]. J Clin Invest 2011
212
28

Hypoxia-induced metabolic stress in retinal pigment epithelial cells is sufficient to induce photoreceptor degeneration.
Toshihide Kurihara, Peter D Westenskow, Marin L Gantner, Yoshihiko Usui, Andrew Schultz, Stephen Bravo, Edith Aguilar, Carli Wittgrove, Mollie Sh Friedlander, Liliana P Paris,[...]. Elife 2016
113
28

Human retinal pigment epithelial cells prefer proline as a nutrient and transport metabolic intermediates to the retinal side.
Jennifer R Chao, Kaitlen Knight, Abbi L Engel, Connor Jankowski, Yekai Wang, Megan A Manson, Haiwei Gu, Danijel Djukovic, Daniel Raftery, James B Hurley,[...]. J Biol Chem 2017
51
35

The retinal pigment epithelium utilizes fatty acids for ketogenesis.
Jeffrey Adijanto, Jianhai Du, Cynthia Moffat, Erin L Seifert, James B Hurle, Nancy J Philp. J Biol Chem 2014
82
25

Glycolytic reliance promotes anabolism in photoreceptors.
Yashodhan Chinchore, Tedi Begaj, David Wu, Eugene Drokhlyansky, Constance L Cepko. Elife 2017
91
23

Phototransduction Influences Metabolic Flux and Nucleotide Metabolism in Mouse Retina.
Jianhai Du, Austin Rountree, Whitney M Cleghorn, Laura Contreras, Ken J Lindsay, Martin Sadilek, Haiwei Gu, Danijel Djukovic, Dan Raftery, Jorgina Satrústegui,[...]. J Biol Chem 2016
61
22

Probing Metabolism in the Intact Retina Using Stable Isotope Tracers.
Jianhai Du, Jonathan D Linton, James B Hurley. Methods Enzymol 2015
42
33

Phagocytosis-dependent ketogenesis in retinal pigment epithelium.
Juan Reyes-Reveles, Anuradha Dhingra, Desiree Alexander, Alvina Bragin, Nancy J Philp, Kathleen Boesze-Battaglia. J Biol Chem 2017
55
25

Pyruvate kinase and aspartate-glutamate carrier distributions reveal key metabolic links between neurons and glia in retina.
Ken J Lindsay, Jianhai Du, Stephanie R Sloat, Laura Contreras, Jonathan D Linton, Sally J Turner, Martin Sadilek, Jorgina Satrústegui, James B Hurley. Proc Natl Acad Sci U S A 2014
84
20


Altered bioenergetics and enhanced resistance to oxidative stress in human retinal pigment epithelial cells from donors with age-related macular degeneration.
Deborah A Ferrington, Mara C Ebeling, Rebecca J Kapphahn, Marcia R Terluk, Cody R Fisher, Jorge R Polanco, Heidi Roehrich, Michaela M Leary, Zhaohui Geng, James R Dutton,[...]. Redox Biol 2017
88
20

Loss of MPC1 reprograms retinal metabolism to impair visual function.
Allison Grenell, Yekai Wang, Michelle Yam, Aditi Swarup, Tanya L Dilan, Allison Hauer, Jonathan D Linton, Nancy J Philp, Elizabeth Gregor, Siyan Zhu,[...]. Proc Natl Acad Sci U S A 2019
49
26

Proline mediates metabolic communication between retinal pigment epithelial cells and the retina.
Michelle Yam, Abbi L Engel, Yekai Wang, Siyan Zhu, Allison Hauer, Rui Zhang, Daniel Lohner, Jiancheng Huang, Marlee Dinterman, Chen Zhao,[...]. J Biol Chem 2019
40
32

Cytosolic reducing power preserves glutamate in retina.
Jianhai Du, Whitney Cleghorn, Laura Contreras, Jonathan D Linton, Guy C-K Chan, Andrei O Chertov, Takeyori Saheki, Viren Govindaraju, Martin Sadilek, Jorgina Satrústegui,[...]. Proc Natl Acad Sci U S A 2013
41
29

Reprogramming metabolism by targeting sirtuin 6 attenuates retinal degeneration.
Lijuan Zhang, Jianhai Du, Sally Justus, Chun-Wei Hsu, Luis Bonet-Ponce, Wen-Hsuan Wu, Yi-Ting Tsai, Wei-Pu Wu, Yading Jia, Jimmy K Duong,[...]. J Clin Invest 2016
55
21


Stimulation of the insulin/mTOR pathway delays cone death in a mouse model of retinitis pigmentosa.
Claudio Punzo, Karl Kornacker, Constance L Cepko. Nat Neurosci 2009
355
17

Reductive carboxylation supports redox homeostasis during anchorage-independent growth.
Lei Jiang, Alexander A Shestov, Pamela Swain, Chendong Yang, Seth J Parker, Qiong A Wang, Lance S Terada, Nicholas D Adams, Michael T McCabe, Beth Pietrak,[...]. Nature 2016
336
15

Modulating GLUT1 expression in retinal pigment epithelium decreases glucose levels in the retina: impact on photoreceptors and Müller glial cells.
Aditi Swarup, Ivy S Samuels, Brent A Bell, John Y S Han, Jianhai Du, Erik Massenzio, E Dale Abel, Kathleen Boesze-Battaglia, Neal S Peachey, Nancy J Philp. Am J Physiol Cell Physiol 2019
43
23

Investigating mitochondria as a target for treating age-related macular degeneration.
Marcia R Terluk, Rebecca J Kapphahn, Lauren M Soukup, Hwee Gong, Christopher Gallardo, Sandra R Montezuma, Deborah A Ferrington. J Neurosci 2015
145
14

Rod-derived cone viability factor promotes cone survival by stimulating aerobic glycolysis.
Najate Aït-Ali, Ram Fridlich, Géraldine Millet-Puel, Emmanuelle Clérin, François Delalande, Céline Jaillard, Frédéric Blond, Ludivine Perrocheau, Sacha Reichman, Leah C Byrne,[...]. Cell 2015
231
14

Activated mTORC1 promotes long-term cone survival in retinitis pigmentosa mice.
Aditya Venkatesh, Shan Ma, Yun Z Le, Michael N Hall, Markus A Rüegg, Claudio Punzo. J Clin Invest 2015
96
14

The retina and retinal pigment epithelium differ in nitrogen metabolism and are metabolically connected.
Rong Xu, Brianna K Ritz, Yekai Wang, Jiancheng Huang, Chen Zhao, Kaizheng Gong, Xinnong Liu, Jianhai Du. J Biol Chem 2020
12
75


Reductive carboxylation supports growth in tumour cells with defective mitochondria.
Andrew R Mullen, William W Wheaton, Eunsook S Jin, Pei-Hsuan Chen, Lucas B Sullivan, Tzuling Cheng, Youfeng Yang, W Marston Linehan, Navdeep S Chandel, Ralph J DeBerardinis. Nature 2011
868
12

Reductive glutamine metabolism by IDH1 mediates lipogenesis under hypoxia.
Christian M Metallo, Paulo A Gameiro, Eric L Bell, Katherine R Mattaini, Juanjuan Yang, Karsten Hiller, Christopher M Jewell, Zachary R Johnson, Darrell J Irvine, Leonard Guarente,[...]. Nature 2011
12

The Warburg Effect Mediator Pyruvate Kinase M2 Expression and Regulation in the Retina.
Raju V S Rajala, Ammaji Rajala, Christopher Kooker, Yuhong Wang, Robert E Anderson. Sci Rep 2016
37
18

The cellular and compartmental profile of mouse retinal glycolysis, tricarboxylic acid cycle, oxidative phosphorylation, and ~P transferring kinases.
Elda M Rueda, Jerry E Johnson, Anand Giddabasappa, Anand Swaroop, Matthew J Brooks, Irena Sigel, Shawnta Y Chaney, Donald A Fox. Mol Vis 2016
51
13

Hypoxia promotes isocitrate dehydrogenase-dependent carboxylation of α-ketoglutarate to citrate to support cell growth and viability.
David R Wise, Patrick S Ward, Jessica E S Shay, Justin R Cross, Joshua J Gruber, Uma M Sachdeva, Jesse M Platt, Raymond G DeMatteo, M Celeste Simon, Craig B Thompson. Proc Natl Acad Sci U S A 2011
698
11

Dysfunctional autophagy in RPE, a contributing factor in age-related macular degeneration.
Nady Golestaneh, Yi Chu, Yang-Yu Xiao, Gianna L Stoleru, Alexander C Theos. Cell Death Dis 2017
179
11

Reductive glutamine metabolism is a function of the α-ketoglutarate to citrate ratio in cells.
Sarah-Maria Fendt, Eric L Bell, Mark A Keibler, Benjamin A Olenchock, Jared R Mayers, Thomas M Wasylenko, Natalie I Vokes, Leonard Guarente, Matthew G Vander Heiden, Gregory Stephanopoulos. Nat Commun 2013
244
11

PGC-1α Induces Human RPE Oxidative Metabolism and Antioxidant Capacity.
Jared Iacovelli, Glenn C Rowe, Arogya Khadka, Daniel Diaz-Aguilar, Carrie Spencer, Zoltan Arany, Magali Saint-Geniez. Invest Ophthalmol Vis Sci 2016
58
12

Metabolic signature of the aging eye in mice.
Yekai Wang, Allison Grenell, Fanyi Zhong, Michelle Yam, Allison Hauer, Elizabeth Gregor, Siyan Zhu, Daniel Lohner, Jiangjiang Zhu, Jianhai Du. Neurobiol Aging 2018
36
19

ATP consumption by mammalian rod photoreceptors in darkness and in light.
Haruhisa Okawa, Alapakkam P Sampath, Simon B Laughlin, Gordon L Fain. Curr Biol 2008
222
11

Mitochondrial oxidative stress in the retinal pigment epithelium (RPE) led to metabolic dysfunction in both the RPE and retinal photoreceptors.
Emily E Brown, Alexander J DeWeerd, Cristhian J Ildefonso, Alfred S Lewin, John D Ash. Redox Biol 2019
89
11

Pyruvate kinase M2 regulates photoreceptor structure, function, and viability.
Ammaji Rajala, Yuhong Wang, Richard S Brush, Kristine Tsantilas, Connor S R Jankowski, Ken J Lindsay, Jonathan D Linton, James B Hurley, Robert E Anderson, Raju V S Rajala. Cell Death Dis 2018
28
25

Succinate Can Shuttle Reducing Power from the Hypoxic Retina to the O2-Rich Pigment Epithelium.
Celia M Bisbach, Daniel T Hass, Brian M Robbings, Austin M Rountree, Martin Sadilek, Ian R Sweet, James B Hurley. Cell Rep 2020
30
23


Glucose utilization by the retinal pigment epithelium: evidence for rapid uptake and storage in glycogen, followed by glycogen utilization.
Preenie deS Senanayake, Anthony Calabro, Jane G Hu, Vera L Bonilha, Aniq Darr, Dean Bok, Joe G Hollyfield. Exp Eye Res 2006
30
20

Understanding the Warburg effect: the metabolic requirements of cell proliferation.
Matthew G Vander Heiden, Lewis C Cantley, Craig B Thompson. Science 2009
9

Insights from retinitis pigmentosa into the roles of isocitrate dehydrogenases in the Krebs cycle.
Dyonne T Hartong, Mayura Dange, Terri L McGee, Eliot L Berson, Thaddeus P Dryja, Roberta F Colman. Nat Genet 2008
111
9

A large genome-wide association study of age-related macular degeneration highlights contributions of rare and common variants.
Lars G Fritsche, Wilmar Igl, Jessica N Cooke Bailey, Felix Grassmann, Sebanti Sengupta, Jennifer L Bragg-Gresham, Kathryn P Burdon, Scott J Hebbring, Cindy Wen, Mathias Gorski,[...]. Nat Genet 2016
767
9

Perspective on AMD Pathobiology: A Bioenergetic Crisis in the RPE.
Cody R Fisher, Deborah A Ferrington. Invest Ophthalmol Vis Sci 2018
92
9

Energy metabolism of the visual system.
Margaret T T Wong-Riley. Eye Brain 2010
245
9

Metabolic Deregulation of the Blood-Outer Retinal Barrier in Retinitis Pigmentosa.
Wei Wang, Ashwini Kini, Yekai Wang, Tingting Liu, Yao Chen, Eric Vukmanic, Douglas Emery, Yongqing Liu, Xiaoqin Lu, Lei Jin,[...]. Cell Rep 2019
36
16


Proline metabolism and microenvironmental stress.
James M Phang, Wei Liu, Olga Zabirnyk. Annu Rev Nutr 2010
167
7

Plasma membrane protein polarity and trafficking in RPE cells: past, present and future.
Guillermo L Lehmann, Ignacio Benedicto, Nancy J Philp, Enrique Rodriguez-Boulan. Exp Eye Res 2014
66
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.