A citation-based method for searching scientific literature

Timothy R Sampson, Justine W Debelius, Taren Thron, Stefan Janssen, Gauri G Shastri, Zehra Esra Ilhan, Collin Challis, Catherine E Schretter, Sandra Rocha, Viviana Gradinaru, Marie-Francoise Chesselet, Ali Keshavarzian, Kathleen M Shannon, Rosa Krajmalnik-Brown, Pernilla Wittung-Stafshede, Rob Knight, Sarkis K Mazmanian. Cell 2016
Times Cited: 1142







List of co-cited articles
1141 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Short chain fatty acids and gut microbiota differ between patients with Parkinson's disease and age-matched controls.
Marcus M Unger, Jörg Spiegel, Klaus-Ulrich Dillmann, David Grundmann, Hannah Philippeit, Jan Bürmann, Klaus Faßbender, Andreas Schwiertz, Karl-Herbert Schäfer. Parkinsonism Relat Disord 2016
360
27

Gut microbiota are related to Parkinson's disease and clinical phenotype.
Filip Scheperjans, Velma Aho, Pedro A B Pereira, Kaisa Koskinen, Lars Paulin, Eero Pekkonen, Elena Haapaniemi, Seppo Kaakkola, Johanna Eerola-Rautio, Marjatta Pohja,[...]. Mov Disord 2015
707
26

Colonic bacterial composition in Parkinson's disease.
Ali Keshavarzian, Stefan J Green, Phillip A Engen, Robin M Voigt, Ankur Naqib, Christopher B Forsyth, Ece Mutlu, Kathleen M Shannon. Mov Disord 2015
430
24

Host microbiota constantly control maturation and function of microglia in the CNS.
Daniel Erny, Anna Lena Hrabě de Angelis, Diego Jaitin, Peter Wieghofer, Ori Staszewski, Eyal David, Hadas Keren-Shaul, Tanel Mahlakoiv, Kristin Jakobshagen, Thorsten Buch,[...]. Nat Neurosci 2015
21

Transneuronal Propagation of Pathologic α-Synuclein from the Gut to the Brain Models Parkinson's Disease.
Sangjune Kim, Seung-Hwan Kwon, Tae-In Kam, Nikhil Panicker, Senthilkumar S Karuppagounder, Saebom Lee, Jun Hee Lee, Wonjoong Richard Kim, Minjee Kook, Catherine A Foss,[...]. Neuron 2019
280
19

Neuroprotective effects of fecal microbiota transplantation on MPTP-induced Parkinson's disease mice: Gut microbiota, glial reaction and TLR4/TNF-α signaling pathway.
Meng-Fei Sun, Ying-Li Zhu, Zhi-Lan Zhou, Xue-Bing Jia, Yi-Da Xu, Qin Yang, Chun Cui, Yan-Qin Shen. Brain Behav Immun 2018
133
17



Vagotomy and subsequent risk of Parkinson's disease.
Elisabeth Svensson, Erzsébet Horváth-Puhó, Reimar W Thomsen, Jens Christian Djurhuus, Lars Pedersen, Per Borghammer, Henrik Toft Sørensen. Ann Neurol 2015
344
16

Intestinal Dysbiosis and Lowered Serum Lipopolysaccharide-Binding Protein in Parkinson's Disease.
Satoru Hasegawa, Sae Goto, Hirokazu Tsuji, Tatsuya Okuno, Takashi Asahara, Koji Nomoto, Akihide Shibata, Yoshiro Fujisawa, Tomomi Minato, Akira Okamoto,[...]. PLoS One 2015
188
15

The gut microbiota influences blood-brain barrier permeability in mice.
Viorica Braniste, Maha Al-Asmakh, Czeslawa Kowal, Farhana Anuar, Afrouz Abbaspour, Miklós Tóth, Agata Korecka, Nadja Bakocevic, Lai Guan Ng, Parag Kundu,[...]. Sci Transl Med 2014
763
15

Parkinson's disease and Parkinson's disease medications have distinct signatures of the gut microbiome.
Erin M Hill-Burns, Justine W Debelius, James T Morton, William T Wissemann, Matthew R Lewis, Zachary D Wallen, Shyamal D Peddada, Stewart A Factor, Eric Molho, Cyrus P Zabetian,[...]. Mov Disord 2017
272
14

The nasal and gut microbiome in Parkinson's disease and idiopathic rapid eye movement sleep behavior disorder.
Anna Heintz-Buschart, Urvashi Pandey, Tamara Wicke, Friederike Sixel-Döring, Annette Janzen, Elisabeth Sittig-Wiegand, Claudia Trenkwalder, Wolfgang H Oertel, Brit Mollenhauer, Paul Wilmes. Mov Disord 2018
156
14

Functional implications of microbial and viral gut metagenome changes in early stage L-DOPA-naïve Parkinson's disease patients.
J R Bedarf, F Hildebrand, L P Coelho, S Sunagawa, M Bahram, F Goeser, P Bork, U Wüllner. Genome Med 2017
198
14

Staging of brain pathology related to sporadic Parkinson's disease.
Heiko Braak, Kelly Del Tredici, Udo Rüb, Rob A I de Vos, Ernst N H Jansen Steur, Eva Braak. Neurobiol Aging 2003
14

Increased intestinal permeability correlates with sigmoid mucosa alpha-synuclein staining and endotoxin exposure markers in early Parkinson's disease.
Christopher B Forsyth, Kathleen M Shannon, Jeffrey H Kordower, Robin M Voigt, Maliha Shaikh, Jean A Jaglin, Jacob D Estes, Hemraj B Dodiya, Ali Keshavarzian. PLoS One 2011
384
12

Direct evidence of Parkinson pathology spread from the gastrointestinal tract to the brain in rats.
Staffan Holmqvist, Oldriska Chutna, Luc Bousset, Patrick Aldrin-Kirk, Wen Li, Tomas Björklund, Zhan-You Wang, Laurent Roybon, Ronald Melki, Jia-Yi Li. Acta Neuropathol 2014
401
12

Structural changes of gut microbiota in Parkinson's disease and its correlation with clinical features.
Wei Li, Xiaoli Wu, Xu Hu, Tao Wang, Shan Liang, Yunfeng Duan, Feng Jin, Bin Qin. Sci China Life Sci 2017
114
12

Gut microbiome alterations in Alzheimer's disease.
Nicholas M Vogt, Robert L Kerby, Kimberly A Dill-McFarland, Sandra J Harding, Andrew P Merluzzi, Sterling C Johnson, Cynthia M Carlsson, Sanjay Asthana, Henrik Zetterberg, Kaj Blennow,[...]. Sci Rep 2017
420
12

The Microbiota-Gut-Brain Axis.
John F Cryan, Kenneth J O'Riordan, Caitlin S M Cowan, Kiran V Sandhu, Thomaz F S Bastiaanssen, Marcus Boehme, Martin G Codagnone, Sofia Cussotto, Christine Fulling, Anna V Golubeva,[...]. Physiol Rev 2019
450
12

Normal gut microbiota modulates brain development and behavior.
Rochellys Diaz Heijtz, Shugui Wang, Farhana Anuar, Yu Qian, Britta Björkholm, Annika Samuelsson, Martin L Hibberd, Hans Forssberg, Sven Pettersson. Proc Natl Acad Sci U S A 2011
11

Gut bacterial tyrosine decarboxylases restrict levels of levodopa in the treatment of Parkinson's disease.
Sebastiaan P van Kessel, Alexandra K Frye, Ahmed O El-Gendy, Maria Castejon, Ali Keshavarzian, Gertjan van Dijk, Sahar El Aidy. Nat Commun 2019
114
11

Alteration of the fecal microbiota in Chinese patients with Parkinson's disease.
Yiwei Qian, Xiaodong Yang, Shaoqing Xu, Chunyan Wu, Yanyan Song, Nan Qin, Sheng-Di Chen, Qin Xiao. Brain Behav Immun 2018
118
11

Discovery and inhibition of an interspecies gut bacterial pathway for Levodopa metabolism.
Vayu Maini Rekdal, Elizabeth N Bess, Jordan E Bisanz, Peter J Turnbaugh, Emily P Balskus. Science 2019
137
11

Intestinal infection triggers Parkinson's disease-like symptoms in Pink1-/- mice.
Diana Matheoud, Tyler Cannon, Aurore Voisin, Anna-Maija Penttinen, Lauriane Ramet, Ahmed M Fahmy, Charles Ducrot, Annie Laplante, Marie-Josée Bourque, Lei Zhu,[...]. Nature 2019
135
11

Postnatal microbial colonization programs the hypothalamic-pituitary-adrenal system for stress response in mice.
Nobuyuki Sudo, Yoichi Chida, Yuji Aiba, Junko Sonoda, Naomi Oyama, Xiao-Nian Yu, Chiharu Kubo, Yasuhiro Koga. J Physiol 2004
10

Gut microbiota in Parkinson disease in a northern German cohort.
Franziska Hopfner, Axel Künstner, Stefanie H Müller, Sven Künzel, Kirsten E Zeuner, Nils G Margraf, Günther Deuschl, John F Baines, Gregor Kuhlenbäumer. Brain Res 2017
119
10

Ingestion of Lactobacillus strain regulates emotional behavior and central GABA receptor expression in a mouse via the vagus nerve.
Javier A Bravo, Paul Forsythe, Marianne V Chew, Emily Escaravage, Hélène M Savignac, Timothy G Dinan, John Bienenstock, John F Cryan. Proc Natl Acad Sci U S A 2011
10

The role of short-chain fatty acids in microbiota-gut-brain communication.
Boushra Dalile, Lukas Van Oudenhove, Bram Vervliet, Kristin Verbeke. Nat Rev Gastroenterol Hepatol 2019
307
10

Gut microbiome remodeling induces depressive-like behaviors through a pathway mediated by the host's metabolism.
P Zheng, B Zeng, C Zhou, M Liu, Z Fang, X Xu, L Zeng, J Chen, S Fan, X Du,[...]. Mol Psychiatry 2016
629
9

Altered gut microbiota and inflammatory cytokine responses in patients with Parkinson's disease.
Chin-Hsien Lin, Chieh-Chang Chen, Han-Lin Chiang, Jyh-Ming Liou, Chih-Min Chang, Tzu-Pin Lu, Eric Y Chuang, Yi-Cheng Tai, Chieh Cheng, Han-Yi Lin,[...]. J Neuroinflammation 2019
69
13

The interplay between the intestinal microbiota and the brain.
Stephen M Collins, Michael Surette, Premysl Bercik. Nat Rev Microbiol 2012
733
9

Exposure to the Functional Bacterial Amyloid Protein Curli Enhances Alpha-Synuclein Aggregation in Aged Fischer 344 Rats and Caenorhabditis elegans.
Shu G Chen, Vilius Stribinskis, Madhavi J Rane, Donald R Demuth, Evelyne Gozal, Andrew M Roberts, Rekha Jagadapillai, Ruolan Liu, Kyonghwan Choe, Bhooma Shivakumar,[...]. Sci Rep 2016
139
9

Increasing Comparability and Utility of Gut Microbiome Studies in Parkinson's Disease: A Systematic Review.
Jeffrey M Boertien, Pedro A B Pereira, Velma T E Aho, Filip Scheperjans. J Parkinsons Dis 2019
48
18

Colonic inflammation in Parkinson's disease.
David Devos, Thibaud Lebouvier, Bernard Lardeux, Mandy Biraud, Tiphaine Rouaud, Hélène Pouclet, Emmanuel Coron, Stanislas Bruley des Varannes, Philippe Naveilhan, Jean-Michel Nguyen,[...]. Neurobiol Dis 2013
257
9

Gut microbiota, metabolites and host immunity.
Michelle G Rooks, Wendy S Garrett. Nat Rev Immunol 2016
936
9


Environment dominates over host genetics in shaping human gut microbiota.
Daphna Rothschild, Omer Weissbrod, Elad Barkan, Alexander Kurilshikov, Tal Korem, David Zeevi, Paul I Costea, Anastasia Godneva, Iris N Kalka, Noam Bar,[...]. Nature 2018
772
8

Microbiota modulate behavioral and physiological abnormalities associated with neurodevelopmental disorders.
Elaine Y Hsiao, Sara W McBride, Sophia Hsien, Gil Sharon, Embriette R Hyde, Tyler McCue, Julian A Codelli, Janet Chow, Sarah E Reisman, Joseph F Petrosino,[...]. Cell 2013
8

Gut-brain axis: how the microbiome influences anxiety and depression.
Jane A Foster, Karen-Anne McVey Neufeld. Trends Neurosci 2013
900
8


Unraveling gut microbiota in Parkinson's disease and atypical parkinsonism.
Michela Barichella, Marco Severgnini, Roberto Cilia, Erica Cassani, Carlotta Bolliri, Serena Caronni, Valentina Ferri, Raffaella Cancello, Camilla Ceccarani, Samanta Faierman,[...]. Mov Disord 2019
78
10

Indigenous bacteria from the gut microbiota regulate host serotonin biosynthesis.
Jessica M Yano, Kristie Yu, Gregory P Donaldson, Gauri G Shastri, Phoebe Ann, Liang Ma, Cathryn R Nagler, Rustem F Ismagilov, Sarkis K Mazmanian, Elaine Y Hsiao. Cell 2015
8

Metabolomics analysis reveals large effects of gut microflora on mammalian blood metabolites.
William R Wikoff, Andrew T Anfora, Jun Liu, Peter G Schultz, Scott A Lesley, Eric C Peters, Gary Siuzdak. Proc Natl Acad Sci U S A 2009
8

Antibiotic-induced perturbations in gut microbial diversity influences neuro-inflammation and amyloidosis in a murine model of Alzheimer's disease.
Myles R Minter, Can Zhang, Vanessa Leone, Daina L Ringus, Xiaoqiong Zhang, Paul Oyler-Castrillo, Mark W Musch, Fan Liao, Joseph F Ward, David M Holtzman,[...]. Sci Rep 2016
235
8

Gut microbiota from multiple sclerosis patients enables spontaneous autoimmune encephalomyelitis in mice.
Kerstin Berer, Lisa Ann Gerdes, Egle Cekanaviciute, Xiaoming Jia, Liang Xiao, Zhongkui Xia, Chuan Liu, Luisa Klotz, Uta Stauffer, Sergio E Baranzini,[...]. Proc Natl Acad Sci U S A 2017
324
8

Human Gut Microbiota from Autism Spectrum Disorder Promote Behavioral Symptoms in Mice.
Gil Sharon, Nikki Jamie Cruz, Dae-Wook Kang, Michael J Gandal, Bo Wang, Young-Mo Kim, Erika M Zink, Cameron P Casey, Bryn C Taylor, Christianne J Lane,[...]. Cell 2019
217
8

Sodium oligomannate therapeutically remodels gut microbiota and suppresses gut bacterial amino acids-shaped neuroinflammation to inhibit Alzheimer's disease progression.
Xinyi Wang, Guangqiang Sun, Teng Feng, Jing Zhang, Xun Huang, Tao Wang, Zuoquan Xie, Xingkun Chu, Jun Yang, Huan Wang,[...]. Cell Res 2019
213
8

The neuroactive potential of the human gut microbiota in quality of life and depression.
Mireia Valles-Colomer, Gwen Falony, Youssef Darzi, Ettje F Tigchelaar, Jun Wang, Raul Y Tito, Carmen Schiweck, Alexander Kurilshikov, Marie Joossens, Cisca Wijmenga,[...]. Nat Microbiol 2019
372
8

Transfer of a healthy microbiota reduces amyloid and tau pathology in an Alzheimer's disease animal model.
Min-Soo Kim, Yoonhee Kim, Hyunjung Choi, Woojin Kim, Sumyung Park, Dongjoon Lee, Dong Kyu Kim, Haeng Jun Kim, Hayoung Choi, Dong-Wook Hyun,[...]. Gut 2020
73
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.