Devin C Koestler, Joseph Usset, Brock C Christensen, Carmen J Marsit, Margaret R Karagas, Karl T Kelsey, John K Wiencke. Cancer Epidemiol Biomarkers Prev 2017
Times Cited: 42
Times Cited: 42
Times Cited
Times Co-cited
Similarity
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66
Immunomethylomic approach to explore the blood neutrophil lymphocyte ratio (NLR) in glioma survival.
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33
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28
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28
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55
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23
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21
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21
A comparison of reference-based algorithms for correcting cell-type heterogeneity in Epigenome-Wide Association Studies.
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19
Blood-based profiles of DNA methylation predict the underlying distribution of cell types: a validation analysis.
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Devin C Koestler, Brock Christensen, Margaret R Karagas, Carmen J Marsit, Scott M Langevin, Karl T Kelsey, John K Wiencke, E Andres Houseman. Epigenetics 2013
16
Cell-type deconvolution in epigenome-wide association studies: a review and recommendations.
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16
A beta-mixture quantile normalization method for correcting probe design bias in Illumina Infinium 450 k DNA methylation data.
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16
The systemic inflammation-based neutrophil-lymphocyte ratio: experience in patients with cancer.
Graeme J K Guthrie, Kellie A Charles, Campbell S D Roxburgh, Paul G Horgan, Donald C McMillan, Stephen J Clarke. Crit Rev Oncol Hematol 2013
Graeme J K Guthrie, Kellie A Charles, Campbell S D Roxburgh, Paul G Horgan, Donald C McMillan, Stephen J Clarke. Crit Rev Oncol Hematol 2013
14
Adjusting batch effects in microarray expression data using empirical Bayes methods.
W Evan Johnson, Cheng Li, Ariel Rabinovic. Biostatistics 2007
W Evan Johnson, Cheng Li, Ariel Rabinovic. Biostatistics 2007
14
DNA methylation of cord blood cell types: Applications for mixed cell birth studies.
Kelly M Bakulski, Jason I Feinberg, Shan V Andrews, Jack Yang, Shannon Brown, Stephanie L McKenney, Frank Witter, Jeremy Walston, Andrew P Feinberg, M Daniele Fallin. Epigenetics 2016
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missMethyl: an R package for analyzing data from Illumina's HumanMethylation450 platform.
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ENmix: a novel background correction method for Illumina HumanMethylation450 BeadChip.
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Accounting for cellular heterogeneity is critical in epigenome-wide association studies.
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Andrew E Jaffe, Rafael A Irizarry. Genome Biol 2014
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DNA Methylation in Whole Blood: Uses and Challenges.
E Andres Houseman, Stephanie Kim, Karl T Kelsey, John K Wiencke. Curr Environ Health Rep 2015
E Andres Houseman, Stephanie Kim, Karl T Kelsey, John K Wiencke. Curr Environ Health Rep 2015
11
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11
Robust enumeration of cell subsets from tissue expression profiles.
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11
Critical evaluation of the Illumina MethylationEPIC BeadChip microarray for whole-genome DNA methylation profiling.
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Immunomethylomics: A Novel Cancer Risk Prediction Tool.
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Karl T Kelsey, John K Wiencke. Ann Am Thorac Soc 2018
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Myeloid-derived suppressor cells as regulators of the immune system.
Dmitry I Gabrilovich, Srinivas Nagaraj. Nat Rev Immunol 2009
Dmitry I Gabrilovich, Srinivas Nagaraj. Nat Rev Immunol 2009
9
Cell-composition effects in the analysis of DNA methylation array data: a mathematical perspective.
E Andres Houseman, Karl T Kelsey, John K Wiencke, Carmen J Marsit. BMC Bioinformatics 2015
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9
Genome-wide methylation profiles reveal quantitative views of human aging rates.
Gregory Hannum, Justin Guinney, Ling Zhao, Li Zhang, Guy Hughes, SriniVas Sadda, Brandy Klotzle, Marina Bibikova, Jian-Bing Fan, Yuan Gao,[...]. Mol Cell 2013
Gregory Hannum, Justin Guinney, Ling Zhao, Li Zhang, Guy Hughes, SriniVas Sadda, Brandy Klotzle, Marina Bibikova, Jian-Bing Fan, Yuan Gao,[...]. Mol Cell 2013
9
Epigenome-wide association data implicate DNA methylation as an intermediary of genetic risk in rheumatoid arthritis.
Yun Liu, Martin J Aryee, Leonid Padyukov, M Daniele Fallin, Espen Hesselberg, Arni Runarsson, Lovisa Reinius, Nathalie Acevedo, Margaret Taub, Marcus Ronninger,[...]. Nat Biotechnol 2013
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9
Cell type specific DNA methylation in cord blood: A 450K-reference data set and cell count-based validation of estimated cell type composition.
Kristina Gervin, Christian Magnus Page, Hans Christian D Aass, Michelle A Jansen, Heidi Elisabeth Fjeldstad, Bettina Kulle Andreassen, Liesbeth Duijts, Joyce B van Meurs, Menno C van Zelm, Vincent W Jaddoe,[...]. Epigenetics 2016
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9
Reference-free deconvolution of DNA methylation data and mediation by cell composition effects.
E Andres Houseman, Molly L Kile, David C Christiani, Tan A Ince, Karl T Kelsey, Carmen J Marsit. BMC Bioinformatics 2016
E Andres Houseman, Molly L Kile, David C Christiani, Tan A Ince, Karl T Kelsey, Carmen J Marsit. BMC Bioinformatics 2016
9
High neutrophil-to-lymphocyte ratio is an independent marker of poor disease-specific survival in patients with oral cancer.
Christos Perisanidis, Gabriela Kornek, Paul W Pöschl, Daniel Holzinger, Katharina Pirklbauer, Christian Schopper, Rolf Ewers. Med Oncol 2013
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Comprehensive characterization, annotation and innovative use of Infinium DNA methylation BeadChip probes.
Wanding Zhou, Peter W Laird, Hui Shen. Nucleic Acids Res 2017
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The sva package for removing batch effects and other unwanted variation in high-throughput experiments.
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9
Assessing the Role of DNA Methylation-Derived Neutrophil-to-Lymphocyte Ratio in Rheumatoid Arthritis.
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50
Average values and racial differences of neutrophil lymphocyte ratio among a nationally representative sample of United States subjects.
Basem Azab, Marlene Camacho-Rivera, Emanuela Taioli. PLoS One 2014
Basem Azab, Marlene Camacho-Rivera, Emanuela Taioli. PLoS One 2014
9
DNA methylation derived systemic inflammation indices are associated with head and neck cancer development and survival.
Srikant Ambatipudi, Ryan Langdon, Rebecca C Richmond, Matthew Suderman, Devin C Koestler, Karl T Kelsey, Nabila Kazmi, Christopher Penfold, Karen M Ho, Wendy McArdle,[...]. Oral Oncol 2018
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33
Independent surrogate variable analysis to deconvolve confounding factors in large-scale microarray profiling studies.
Andrew E Teschendorff, Joanna Zhuang, Martin Widschwendter. Bioinformatics 2011
Andrew E Teschendorff, Joanna Zhuang, Martin Widschwendter. Bioinformatics 2011
7
Review of processing and analysis methods for DNA methylation array data.
C S Wilhelm-Benartzi, D C Koestler, M R Karagas, J M Flanagan, B C Christensen, K T Kelsey, C J Marsit, E A Houseman, R Brown. Br J Cancer 2013
C S Wilhelm-Benartzi, D C Koestler, M R Karagas, J M Flanagan, B C Christensen, K T Kelsey, C J Marsit, E A Houseman, R Brown. Br J Cancer 2013
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Characterizing the hypomethylated DNA methylation profile of nucleated red blood cells from cord blood.
Olivia M de Goede, Pascal M Lavoie, Wendy P Robinson. Epigenomics 2016
Olivia M de Goede, Pascal M Lavoie, Wendy P Robinson. Epigenomics 2016
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An evaluation of methods correcting for cell-type heterogeneity in DNA methylation studies.
Kevin McGregor, Sasha Bernatsky, Ines Colmegna, Marie Hudson, Tomi Pastinen, Aurélie Labbe, Celia M T Greenwood. Genome Biol 2016
Kevin McGregor, Sasha Bernatsky, Ines Colmegna, Marie Hudson, Tomi Pastinen, Aurélie Labbe, Celia M T Greenwood. Genome Biol 2016
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The DNA methylation profile of activated human natural killer cells.
John K Wiencke, Rondi Butler, George Hsuang, Melissa Eliot, Stephanie Kim, Manuel A Sepulveda, Derick Siegel, E Andres Houseman, Karl T Kelsey. Epigenetics 2016
John K Wiencke, Rondi Butler, George Hsuang, Melissa Eliot, Stephanie Kim, Manuel A Sepulveda, Derick Siegel, E Andres Houseman, Karl T Kelsey. Epigenetics 2016
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Reference-free cell mixture adjustments in analysis of DNA methylation data.
Eugene Andres Houseman, John Molitor, Carmen J Marsit. Bioinformatics 2014
Eugene Andres Houseman, John Molitor, Carmen J Marsit. Bioinformatics 2014
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Enlarged leukocyte referent libraries can explain additional variance in blood-based epigenome-wide association studies.
Stephanie Kim, Melissa Eliot, Devin C Koestler, Eugene A Houseman, James G Wetmur, John K Wiencke, Karl T Kelsey. Epigenomics 2016
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Aging and environmental exposures alter tissue-specific DNA methylation dependent upon CpG island context.
Brock C Christensen, E Andres Houseman, Carmen J Marsit, Shichun Zheng, Margaret R Wrensch, Joseph L Wiemels, Heather H Nelson, Margaret R Karagas, James F Padbury, Raphael Bueno,[...]. PLoS Genet 2009
Brock C Christensen, E Andres Houseman, Carmen J Marsit, Shichun Zheng, Margaret R Wrensch, Joseph L Wiemels, Heather H Nelson, Margaret R Karagas, James F Padbury, Raphael Bueno,[...]. PLoS Genet 2009
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Prognostic significance of the neutrophil to lymphocyte ratio in patients with non-small cell lung cancer: a systemic review and meta-analysis.
Bin Peng, Yi-Han Wang, Yong-Mei Liu, Lei-Xue Ma. Int J Clin Exp Med 2015
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7
Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.