A citation-based method for searching scientific literature

Gonzalo Arias-Gil, Frank Walter Ohl, Kentaroh Takagaki, Michael Thomas Lippert. Neurophotonics 2016
Times Cited: 31







List of co-cited articles
181 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Modeling the Spatiotemporal Dynamics of Light and Heat Propagation for In Vivo Optogenetics.
Joseph M Stujenske, Timothy Spellman, Joshua A Gordon. Cell Rep 2015
152
61

Optogenetics in neural systems.
Ofer Yizhar, Lief E Fenno, Thomas J Davidson, Murtaza Mogri, Karl Deisseroth. Neuron 2011
959
35

Independent optical excitation of distinct neural populations.
Nathan C Klapoetke, Yasunobu Murata, Sung Soo Kim, Stefan R Pulver, Amanda Birdsey-Benson, Yong Ku Cho, Tania K Morimoto, Amy S Chuong, Eric J Carpenter, Zhijian Tian,[...]. Nat Methods 2014
862
35

Silencing Neurons: Tools, Applications, and Experimental Constraints.
J Simon Wiegert, Mathias Mahn, Matthias Prigge, Yoav Printz, Ofer Yizhar. Neuron 2017
112
29

Biophysical constraints of optogenetic inhibition at presynaptic terminals.
Mathias Mahn, Matthias Prigge, Shiri Ron, Rivka Levy, Ofer Yizhar. Nat Neurosci 2016
170
25

Thermal constraints on in vivo optogenetic manipulations.
Scott F Owen, Max H Liu, Anatol C Kreitzer. Nat Neurosci 2019
118
25

Millisecond-timescale, genetically targeted optical control of neural activity.
Edward S Boyden, Feng Zhang, Ernst Bamberg, Georg Nagel, Karl Deisseroth. Nat Neurosci 2005
22

An optical neural interface: in vivo control of rodent motor cortex with integrated fiberoptic and optogenetic technology.
Alexander M Aravanis, Li-Ping Wang, Feng Zhang, Leslie A Meltzer, Murtaza Z Mogri, M Bret Schneider, Karl Deisseroth. J Neural Eng 2007
520
22

fMRI response to blue light delivery in the naïve brain: implications for combined optogenetic fMRI studies.
Isabel N Christie, Jack A Wells, Paul Southern, Nephtali Marina, Sergey Kasparov, Alexander V Gourine, Mark F Lythgoe. Neuroimage 2013
76
19

Principles for applying optogenetic tools derived from direct comparative analysis of microbial opsins.
Joanna Mattis, Kay M Tye, Emily A Ferenczi, Charu Ramakrishnan, Daniel J O'Shea, Rohit Prakash, Lisa A Gunaydin, Minsuk Hyun, Lief E Fenno, Viviana Gradinaru,[...]. Nat Methods 2011
422
19

Integration of optogenetics with complementary methodologies in systems neuroscience.
Christina K Kim, Avishek Adhikari, Karl Deisseroth. Nat Rev Neurosci 2017
261
19

Neocortical excitation/inhibition balance in information processing and social dysfunction.
Ofer Yizhar, Lief E Fenno, Matthias Prigge, Franziska Schneider, Thomas J Davidson, Daniel J O'Shea, Vikaas S Sohal, Inbal Goshen, Joel Finkelstein, Jeanne T Paz,[...]. Nature 2011
19

The development and application of optogenetics.
Lief Fenno, Ofer Yizhar, Karl Deisseroth. Annu Rev Neurosci 2011
936
16

Multimodal fast optical interrogation of neural circuitry.
Feng Zhang, Li-Ping Wang, Martin Brauner, Jana F Liewald, Kenneth Kay, Natalie Watzke, Phillip G Wood, Ernst Bamberg, Georg Nagel, Alexander Gottschalk,[...]. Nature 2007
16

Noninvasive optical inhibition with a red-shifted microbial rhodopsin.
Amy S Chuong, Mitra L Miri, Volker Busskamp, Gillian A C Matthews, Leah C Acker, Andreas T Sørensen, Andrew Young, Nathan C Klapoetke, Mike A Henninger, Suhasa B Kodandaramaiah,[...]. Nat Neurosci 2014
262
16

Light controls cerebral blood flow in naive animals.
Ravi L Rungta, Bruno-Félix Osmanski, Davide Boido, Mickael Tanter, Serge Charpak. Nat Commun 2017
68
16

NEUROSCIENCE. Natural light-gated anion channels: A family of microbial rhodopsins for advanced optogenetics.
Elena G Govorunova, Oleg A Sineshchekov, Roger Janz, Xiaoqin Liu, John L Spudich. Science 2015
267
16

Molecular and cellular approaches for diversifying and extending optogenetics.
Viviana Gradinaru, Feng Zhang, Charu Ramakrishnan, Joanna Mattis, Rohit Prakash, Ilka Diester, Inbal Goshen, Kimberly R Thompson, Karl Deisseroth. Cell 2010
582
16


Characterization of fiber-optic light delivery and light-induced temperature changes in a rodent brain for precise optogenetic neuromodulation.
Younghoon Shin, Minsu Yoo, Hyung-Sun Kim, Sung-Ki Nam, Hyoung-Ihl Kim, Sun-Kyu Lee, Sohee Kim, Hyuk-Sang Kwon. Biomed Opt Express 2016
11
45

High-performance genetically targetable optical neural silencing by light-driven proton pumps.
Brian Y Chow, Xue Han, Allison S Dobry, Xiaofeng Qian, Amy S Chuong, Mingjie Li, Michael A Henninger, Gabriel M Belfort, Yingxi Lin, Patrick E Monahan,[...]. Nature 2010
704
12

Structure-guided transformation of channelrhodopsin into a light-activated chloride channel.
Andre Berndt, Soo Yeun Lee, Charu Ramakrishnan, Karl Deisseroth. Science 2014
215
12

Optogenetic silencing strategies differ in their effects on inhibitory synaptic transmission.
Joseph V Raimondo, Louise Kay, Tommas J Ellender, Colin J Akerman. Nat Neurosci 2012
137
12

Bi-stable neural state switches.
André Berndt, Ofer Yizhar, Lisa A Gunaydin, Peter Hegemann, Karl Deisseroth. Nat Neurosci 2009
332
12

Experimental assessment of the safety and potential efficacy of high irradiance photostimulation of brain tissues.
Suhan Senova, Ilona Scisniak, Chih-Chieh Chiang, Isabelle Doignon, Stéphane Palfi, Antoine Chaillet, Claire Martin, Frédéric Pain. Sci Rep 2017
26
15


A light-driven sodium ion pump in marine bacteria.
Keiichi Inoue, Hikaru Ono, Rei Abe-Yoshizumi, Susumu Yoshizawa, Hiroyasu Ito, Kazuhiro Kogure, Hideki Kandori. Nat Commun 2013
204
12

ReaChR: a red-shifted variant of channelrhodopsin enables deep transcranial optogenetic excitation.
John Y Lin, Per Magne Knutsen, Arnaud Muller, David Kleinfeld, Roger Y Tsien. Nat Neurosci 2013
406
12

Driving fast-spiking cells induces gamma rhythm and controls sensory responses.
Jessica A Cardin, Marie Carlén, Konstantinos Meletis, Ulf Knoblich, Feng Zhang, Karl Deisseroth, Li-Huei Tsai, Christopher I Moore. Nature 2009
12

The contribution of raised intraneuronal chloride to epileptic network activity.
Hannah Alfonsa, Edward M Merricks, Neela K Codadu, Mark O Cunningham, Karl Deisseroth, Claudia Racca, Andrew J Trevelyan. J Neurosci 2015
58
9

Targeting Neural Circuits.
Priyamvada Rajasethupathy, Emily Ferenczi, Karl Deisseroth. Cell 2016
80
9

Engineering a memory with LTD and LTP.
Sadegh Nabavi, Rocky Fox, Christophe D Proulx, John Y Lin, Roger Y Tsien, Roberto Malinow. Nature 2014
478
9

Remote control of neuronal activity in transgenic mice expressing evolved G protein-coupled receptors.
Georgia M Alexander, Sarah C Rogan, Atheir I Abbas, Blaine N Armbruster, Ying Pei, John A Allen, Randal J Nonneman, John Hartmann, Sheryl S Moy, Miguel A Nicolelis,[...]. Neuron 2009
542
9

The Expanding Family of Natural Anion Channelrhodopsins Reveals Large Variations in Kinetics, Conductance, and Spectral Sensitivity.
Elena G Govorunova, Oleg A Sineshchekov, Elsa M Rodarte, Roger Janz, Olivier Morelle, Michael Melkonian, Gane K-S Wong, John L Spudich. Sci Rep 2017
42
9

An optogenetic toolbox designed for primates.
Ilka Diester, Matthew T Kaufman, Murtaza Mogri, Ramin Pashaie, Werapong Goo, Ofer Yizhar, Charu Ramakrishnan, Karl Deisseroth, Krishna V Shenoy. Nat Neurosci 2011
280
9

Amygdala circuitry mediating reversible and bidirectional control of anxiety.
Kay M Tye, Rohit Prakash, Sung-Yon Kim, Lief E Fenno, Logan Grosenick, Hosniya Zarabi, Kimberly R Thompson, Viviana Gradinaru, Charu Ramakrishnan, Karl Deisseroth. Nature 2011
699
9




Structural foundations of optogenetics: Determinants of channelrhodopsin ion selectivity.
Andre Berndt, Soo Yeun Lee, Jonas Wietek, Charu Ramakrishnan, Elizabeth E Steinberg, Asim J Rashid, Hoseok Kim, Sungmo Park, Adam Santoro, Paul W Frankland,[...]. Proc Natl Acad Sci U S A 2016
106
9

FEF inactivation with improved optogenetic methods.
Leah Acker, Erica N Pino, Edward S Boyden, Robert Desimone. Proc Natl Acad Sci U S A 2016
47
9

Light distribution and thermal effects in the rat brain under optogenetic stimulation.
Barbara Gysbrechts, Ling Wang, Nghia Nguyen Do Trong, Henrique Cabral, Zaneta Navratilova, Francesco Battaglia, Wouter Saeys, Carmen Bartic. J Biophotonics 2016
14
21

Dynamic illumination of spatially restricted or large brain volumes via a single tapered optical fiber.
Ferruccio Pisanello, Gil Mandelbaum, Marco Pisanello, Ian A Oldenburg, Leonardo Sileo, Jeffrey E Markowitz, Ralph E Peterson, Andrea Della Patria, Trevor M Haynes, Mohamed S Emara,[...]. Nat Neurosci 2017
52
9

An Integrated Circuit for Simultaneous Extracellular Electrophysiology Recording and Optogenetic Neural Manipulation.
Chang Hao Chen, Elizabeth A McCullagh, Sio Hang Pun, Peng Un Mak, Mang I Vai, Pui In Mak, Achim Klug, Tim C Lei. IEEE Trans Biomed Eng 2017
13
23

eNpHR: a Natronomonas halorhodopsin enhanced for optogenetic applications.
Viviana Gradinaru, Kimberly R Thompson, Karl Deisseroth. Brain Cell Biol 2008
286
9


All-Optical Interrogation of Neural Circuits.
Valentina Emiliani, Adam E Cohen, Karl Deisseroth, Michael Häusser. J Neurosci 2015
146
9

Submillisecond Optogenetic Control of Neuronal Firing with Two-Photon Holographic Photoactivation of Chronos.
Emiliano Ronzitti, Rossella Conti, Valeria Zampini, Dimitrii Tanese, Amanda J Foust, Nathan Klapoetke, Edward S Boyden, Eirini Papagiakoumou, Valentina Emiliani. J Neurosci 2017
49
9

Brain surface temperature under a craniotomy.
Abigail S Kalmbach, Jack Waters. J Neurophysiol 2012
45
9

Sparse optical microstimulation in barrel cortex drives learned behaviour in freely moving mice.
Daniel Huber, Leopoldo Petreanu, Nima Ghitani, Sachin Ranade, Tomás Hromádka, Zach Mainen, Karel Svoboda. Nature 2008
308
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.