A citation-based method for searching scientific literature

Ekta Lachmandas, Lily Boutens, Jacqueline M Ratter, Anneke Hijmans, Guido J Hooiveld, Leo A B Joosten, Richard J Rodenburg, Jack A M Fransen, Riekelt H Houtkooper, Reinout van Crevel, Mihai G Netea, Rinke Stienstra. Nat Microbiol 2016
Times Cited: 157







List of co-cited articles
892 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Succinate is an inflammatory signal that induces IL-1β through HIF-1α.
G M Tannahill, A M Curtis, J Adamik, E M Palsson-McDermott, A F McGettrick, G Goel, C Frezza, N J Bernard, B Kelly, N H Foley,[...]. Nature 2013
39

Network integration of parallel metabolic and transcriptional data reveals metabolic modules that regulate macrophage polarization.
Abhishek K Jha, Stanley Ching-Cheng Huang, Alexey Sergushichev, Vicky Lampropoulou, Yulia Ivanova, Ekaterina Loginicheva, Karina Chmielewski, Kelly M Stewart, Juliet Ashall, Bart Everts,[...]. Immunity 2015
889
35

A guide to immunometabolism for immunologists.
Luke A J O'Neill, Rigel J Kishton, Jeff Rathmell. Nat Rev Immunol 2016
34

Succinate Dehydrogenase Supports Metabolic Repurposing of Mitochondria to Drive Inflammatory Macrophages.
Evanna L Mills, Beth Kelly, Angela Logan, Ana S H Costa, Mukund Varma, Clare E Bryant, Panagiotis Tourlomousis, J Henry M Däbritz, Eyal Gottlieb, Isabel Latorre,[...]. Cell 2016
839
28

mTOR- and HIF-1α-mediated aerobic glycolysis as metabolic basis for trained immunity.
Shih-Chin Cheng, Jessica Quintin, Robert A Cramer, Kelly M Shepardson, Sadia Saeed, Vinod Kumar, Evangelos J Giamarellos-Bourboulis, Joost H A Martens, Nagesha Appukudige Rao, Ali Aghajanirefah,[...]. Science 2014
975
24

Immunometabolism governs dendritic cell and macrophage function.
Luke A J O'Neill, Edward J Pearce. J Exp Med 2016
779
23

Glutaminolysis and Fumarate Accumulation Integrate Immunometabolic and Epigenetic Programs in Trained Immunity.
Rob J W Arts, Boris Novakovic, Rob Ter Horst, Agostinho Carvalho, Siroon Bekkering, Ekta Lachmandas, Fernando Rodrigues, Ricardo Silvestre, Shih-Chin Cheng, Shuang-Yin Wang,[...]. Cell Metab 2016
384
22

Substrate fate in activated macrophages: a comparison between innate, classic, and alternative activation.
Juan-Carlos Rodríguez-Prados, Paqui G Través, Jimena Cuenca, Daniel Rico, Julián Aragonés, Paloma Martín-Sanz, Marta Cascante, Lisardo Boscá. J Immunol 2010
585
22

Metabolic pathways in immune cell activation and quiescence.
Erika L Pearce, Edward J Pearce. Immunity 2013
858
19

Itaconate is an anti-inflammatory metabolite that activates Nrf2 via alkylation of KEAP1.
Evanna L Mills, Dylan G Ryan, Hiran A Prag, Dina Dikovskaya, Deepthi Menon, Zbigniew Zaslona, Mark P Jedrychowski, Ana S H Costa, Maureen Higgins, Emily Hams,[...]. Nature 2018
586
18

Broad defects in the energy metabolism of leukocytes underlie immunoparalysis in sepsis.
Shih-Chin Cheng, Brendon P Scicluna, Rob J W Arts, Mark S Gresnigt, Ekta Lachmandas, Evangelos J Giamarellos-Bourboulis, Matthijs Kox, Ganesh R Manjeri, Jori A L Wagenaars, Olaf L Cremer,[...]. Nat Immunol 2016
297
17

Immune-responsive gene 1 protein links metabolism to immunity by catalyzing itaconic acid production.
Alessandro Michelucci, Thekla Cordes, Jenny Ghelfi, Arnaud Pailot, Norbert Reiling, Oliver Goldmann, Tina Binz, André Wegner, Aravind Tallam, Antonio Rausell,[...]. Proc Natl Acad Sci U S A 2013
487
17

Itaconate Links Inhibition of Succinate Dehydrogenase with Macrophage Metabolic Remodeling and Regulation of Inflammation.
Vicky Lampropoulou, Alexey Sergushichev, Monika Bambouskova, Sharmila Nair, Emma E Vincent, Ekaterina Loginicheva, Luisa Cervantes-Barragan, Xiucui Ma, Stanley Ching-Cheng Huang, Takla Griss,[...]. Cell Metab 2016
551
17

Pyruvate kinase M2 regulates Hif-1α activity and IL-1β induction and is a critical determinant of the warburg effect in LPS-activated macrophages.
Eva M Palsson-McDermott, Anne M Curtis, Gautam Goel, Mario A R Lauterbach, Frederick J Sheedy, Laura E Gleeson, Mirjam W M van den Bosch, Susan R Quinn, Raquel Domingo-Fernandez, Daniel G W Johnston,[...]. Cell Metab 2015
544
17

Toll-like receptor-induced changes in glycolytic metabolism regulate dendritic cell activation.
Connie M Krawczyk, Thomas Holowka, Jie Sun, Julianna Blagih, Eyal Amiel, Ralph J DeBerardinis, Justin R Cross, Euihye Jung, Craig B Thompson, Russell G Jones,[...]. Blood 2010
717
16

Metabolic Induction of Trained Immunity through the Mevalonate Pathway.
Siroon Bekkering, Rob J W Arts, Boris Novakovic, Ioannis Kourtzelis, Charlotte D C C van der Heijden, Yang Li, Calin D Popa, Rob Ter Horst, Julia van Tuijl, Romana T Netea-Maier,[...]. Cell 2018
299
15

TLR-driven early glycolytic reprogramming via the kinases TBK1-IKKɛ supports the anabolic demands of dendritic cell activation.
Bart Everts, Eyal Amiel, Stanley Ching-Cheng Huang, Amber M Smith, Chih-Hao Chang, Wing Y Lam, Veronika Redmann, Tori C Freitas, Julianna Blagih, Gerritje J W van der Windt,[...]. Nat Immunol 2014
596
15

Metabolic reprogramming of macrophages: glucose transporter 1 (GLUT1)-mediated glucose metabolism drives a proinflammatory phenotype.
Alex J Freemerman, Amy R Johnson, Gina N Sacks, J Justin Milner, Erin L Kirk, Melissa A Troester, Andrew N Macintyre, Pankuri Goraksha-Hicks, Jeffery C Rathmell, Liza Makowski. J Biol Chem 2014
422
15

Immunometabolic Pathways in BCG-Induced Trained Immunity.
Rob J W Arts, Agostinho Carvalho, Claudia La Rocca, Carla Palma, Fernando Rodrigues, Ricardo Silvestre, Johanneke Kleinnijenhuis, Ekta Lachmandas, Luís G Gonçalves, Ana Belinha,[...]. Cell Rep 2016
278
14

BCG Educates Hematopoietic Stem Cells to Generate Protective Innate Immunity against Tuberculosis.
Eva Kaufmann, Joaquin Sanz, Jonathan L Dunn, Nargis Khan, Laura E Mendonça, Alain Pacis, Fanny Tzelepis, Erwan Pernet, Anne Dumaine, Jean-Christophe Grenier,[...]. Cell 2018
467
13

Modulation of Myelopoiesis Progenitors Is an Integral Component of Trained Immunity.
Ioannis Mitroulis, Klara Ruppova, Baomei Wang, Lan-Sun Chen, Michal Grzybek, Tatyana Grinenko, Anne Eugster, Maria Troullinaki, Alessandra Palladini, Ioannis Kourtzelis,[...]. Cell 2018
426
12

Epigenetic programming of monocyte-to-macrophage differentiation and trained innate immunity.
Sadia Saeed, Jessica Quintin, Hindrik H D Kerstens, Nagesha A Rao, Ali Aghajanirefah, Filomena Matarese, Shih-Chin Cheng, Jacqueline Ratter, Kim Berentsen, Martijn A van der Ent,[...]. Science 2014
839
12

Trained immunity: A program of innate immune memory in health and disease.
Mihai G Netea, Leo A B Joosten, Eicke Latz, Kingston H G Mills, Gioacchino Natoli, Hendrik G Stunnenberg, Luke A J O'Neill, Ramnik J Xavier. Science 2016
12

TLR signalling augments macrophage bactericidal activity through mitochondrial ROS.
A Phillip West, Igor E Brodsky, Christoph Rahner, Dong Kyun Woo, Hediye Erdjument-Bromage, Paul Tempst, Matthew C Walsh, Yongwon Choi, Gerald S Shadel, Sankar Ghosh. Nature 2011
925
12

Macrophage Immunometabolism: Where Are We (Going)?
Jan Van den Bossche, Luke A O'Neill, Deepthi Menon. Trends Immunol 2017
414
12

Defining trained immunity and its role in health and disease.
Mihai G Netea, Jorge Domínguez-Andrés, Luis B Barreiro, Triantafyllos Chavakis, Maziar Divangahi, Elaine Fuchs, Leo A B Joosten, Jos W M van der Meer, Musa M Mhlanga, Willem J M Mulder,[...]. Nat Rev Immunol 2020
566
12

Bacille Calmette-Guerin induces NOD2-dependent nonspecific protection from reinfection via epigenetic reprogramming of monocytes.
Johanneke Kleinnijenhuis, Jessica Quintin, Frank Preijers, Leo A B Joosten, Daniela C Ifrim, Sadia Saeed, Cor Jacobs, Joke van Loenhout, Dirk de Jong, Hendrik G Stunnenberg,[...]. Proc Natl Acad Sci U S A 2012
864
11

Rewiring monocyte glucose metabolism via C-type lectin signaling protects against disseminated candidiasis.
Jorge Domínguez-Andrés, Rob J W Arts, Rob Ter Horst, Mark S Gresnigt, Sanne P Smeekens, Jacqueline M Ratter, Ekta Lachmandas, Lily Boutens, Frank L van de Veerdonk, Leo A B Joosten,[...]. PLoS Pathog 2017
46
23

Mitochondrial Dysfunction Prevents Repolarization of Inflammatory Macrophages.
Jan Van den Bossche, Jeroen Baardman, Natasja A Otto, Saskia van der Velden, Annette E Neele, Susan M van den Berg, Rosario Luque-Martin, Hung-Jen Chen, Marieke C S Boshuizen, Mohamed Ahmed,[...]. Cell Rep 2016
343
11

Macrophage activation and polarization: nomenclature and experimental guidelines.
Peter J Murray, Judith E Allen, Subhra K Biswas, Edward A Fisher, Derek W Gilroy, Sergij Goerdt, Siamon Gordon, John A Hamilton, Lionel B Ivashkiv, Toby Lawrence,[...]. Immunity 2014
11

Cell-intrinsic lysosomal lipolysis is essential for alternative activation of macrophages.
Stanley Ching-Cheng Huang, Bart Everts, Yulia Ivanova, David O'Sullivan, Marcia Nascimento, Amber M Smith, Wandy Beatty, Latisha Love-Gregory, Wing Y Lam, Christina M O'Neill,[...]. Nat Immunol 2014
602
11

Candida albicans infection affords protection against reinfection via functional reprogramming of monocytes.
Jessica Quintin, Sadia Saeed, Joost H A Martens, Evangelos J Giamarellos-Bourboulis, Daniela C Ifrim, Colin Logie, Liesbeth Jacobs, Trees Jansen, Bart-Jan Kullberg, Cisca Wijmenga,[...]. Cell Host Microbe 2012
613
10

α-ketoglutarate orchestrates macrophage activation through metabolic and epigenetic reprogramming.
Pu-Ste Liu, Haiping Wang, Xiaoyun Li, Tung Chao, Tony Teav, Stefan Christen, Giusy Di Conza, Wan-Chen Cheng, Chih-Hung Chou, Magdalena Vavakova,[...]. Nat Immunol 2017
374
10

Metabolic reprograming in macrophage polarization.
Silvia Galván-Peña, Luke A J O'Neill. Front Immunol 2014
501
10


Immunoresponsive Gene 1 and Itaconate Inhibit Succinate Dehydrogenase to Modulate Intracellular Succinate Levels.
Thekla Cordes, Martina Wallace, Alessandro Michelucci, Ajit S Divakaruni, Sean C Sapcariu, Carole Sousa, Haruhiko Koseki, Pedro Cabrales, Anne N Murphy, Karsten Hiller,[...]. J Biol Chem 2016
222
10

Rewiring cellular metabolism via the AKT/mTOR pathway contributes to host defence against Mycobacterium tuberculosis in human and murine cells.
Ekta Lachmandas, Macarena Beigier-Bompadre, Shih-Chin Cheng, Vinod Kumar, Arjan van Laarhoven, Xinhui Wang, Anne Ammerdorffer, Lily Boutens, Dirk de Jong, Thirumala-Devi Kanneganti,[...]. Eur J Immunol 2016
81
12

Mycobacterium tuberculosis induces decelerated bioenergetic metabolism in human macrophages.
Bridgette M Cumming, Kelvin W Addicott, John H Adamson, Adrie Jc Steyn. Elife 2018
87
11

The Metabolic Signature of Macrophage Responses.
Antonella Viola, Fabio Munari, Ricardo Sánchez-Rodríguez, Tommaso Scolaro, Alessandra Castegna. Front Immunol 2019
394
10

Nitric Oxide Modulates Metabolic Remodeling in Inflammatory Macrophages through TCA Cycle Regulation and Itaconate Accumulation.
Jade D Bailey, Marina Diotallevi, Thomas Nicol, Eileen McNeill, Andrew Shaw, Surawee Chuaiphichai, Ashley Hale, Anna Starr, Manasi Nandi, Elena Stylianou,[...]. Cell Rep 2019
77
12

Trained immunity: a memory for innate host defense.
Mihai G Netea, Jessica Quintin, Jos W M van der Meer. Cell Host Microbe 2011
724
9

Specific and Complex Reprogramming of Cellular Metabolism in Myeloid Cells during Innate Immune Responses.
Rinke Stienstra, Romana T Netea-Maier, Niels P Riksen, Leo A B Joosten, Mihai G Netea. Cell Metab 2017
89
10

Cutting Edge: Mycobacterium tuberculosis Induces Aerobic Glycolysis in Human Alveolar Macrophages That Is Required for Control of Intracellular Bacillary Replication.
Laura E Gleeson, Frederick J Sheedy, Eva M Palsson-McDermott, Denise Triglia, Seonadh M O'Leary, Mary P O'Sullivan, Luke A J O'Neill, Joseph Keane. J Immunol 2016
146
9

Oxidative metabolism and PGC-1beta attenuate macrophage-mediated inflammation.
Divya Vats, Lata Mukundan, Justin I Odegaard, Lina Zhang, Kristi L Smith, Christine R Morel, Roger A Wagner, David R Greaves, Peter J Murray, Ajay Chawla. Cell Metab 2006
849
9

Cutting edge: distinct glycolytic and lipid oxidative metabolic programs are essential for effector and regulatory CD4+ T cell subsets.
Ryan D Michalek, Valerie A Gerriets, Sarah R Jacobs, Andrew N Macintyre, Nancie J MacIver, Emily F Mason, Sarah A Sullivan, Amanda G Nichols, Jeffrey C Rathmell. J Immunol 2011
9

Mycobacterium tuberculosis Limits Host Glycolysis and IL-1β by Restriction of PFK-M via MicroRNA-21.
Emer E Hackett, Hugo Charles-Messance, Seónadh M O'Leary, Laura E Gleeson, Natalia Muñoz-Wolf, Sarah Case, Anna Wedderburn, Daniel G W Johnston, Michelle A Williams, Alicia Smyth,[...]. Cell Rep 2020
56
16

Nitric oxide orchestrates metabolic rewiring in M1 macrophages by targeting aconitase 2 and pyruvate dehydrogenase.
Erika M Palmieri, Marieli Gonzalez-Cotto, Walter A Baseler, Luke C Davies, Bart Ghesquière, Nunziata Maio, Christopher M Rice, Tracey A Rouault, Teresa Cassel, Richard M Higashi,[...]. Nat Commun 2020
97
9

Metabolic Instruction of Immunity.
Michael D Buck, Ryan T Sowell, Susan M Kaech, Erika L Pearce. Cell 2017
532
8

β-Glucan Reverses the Epigenetic State of LPS-Induced Immunological Tolerance.
Boris Novakovic, Ehsan Habibi, Shuang-Yin Wang, Rob J W Arts, Robab Davar, Wout Megchelenbrink, Bowon Kim, Tatyana Kuznetsova, Matthijs Kox, Jelle Zwaag,[...]. Cell 2016
274
8

Western Diet Triggers NLRP3-Dependent Innate Immune Reprogramming.
Anette Christ, Patrick Günther, Mario A R Lauterbach, Peter Duewell, Debjani Biswas, Karin Pelka, Claus J Scholz, Marije Oosting, Kristian Haendler, Kevin Baßler,[...]. Cell 2018
432
8


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.