A citation-based method for searching scientific literature

Single-Molecule Analysis of mtDNA Replication Uncovers the Basis of the Common Deletion.
Aaron F Phillips, Armêl R Millet, Marco Tigano, Sonia M Dubois, Hannah Crimmins, Loelia Babin, Marine Charpentier, Marion Piganeau, Erika Brunet, Agnel Sfeir. Mol Cell 2017
Times Cited: 72






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List of co-cited articles
902 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Specific elimination of mutant mitochondrial genomes in patient-derived cells by mitoTALENs.
Sandra R Bacman, Siôn L Williams, Milena Pinto, Susana Peralta, Carlos T Moraes. Nat Med 2013
230
21
29

Mitochondrially targeted ZFNs for selective degradation of pathogenic mitochondrial genomes bearing large-scale deletions or point mutations.
Payam A Gammage, Joanna Rorbach, Anna I Vincent, Edward J Rebar, Michal Minczuk. EMBO Mol Med 2014
150
20
27

Premature ageing in mice expressing defective mitochondrial DNA polymerase.
Aleksandra Trifunovic, Anna Wredenberg, Maria Falkenberg, Johannes N Spelbrink, Anja T Rovio, Carl E Bruder, Mohammad Bohlooly-Y, Sebastian Gidlöf, Anders Oldfors, Rolf Wibom,[...]. Nature 2004
1756
19
26

Selective elimination of mitochondrial mutations in the germline by genome editing.
Pradeep Reddy, Alejandro Ocampo, Keiichiro Suzuki, Jinping Luo, Sandra R Bacman, Sion L Williams, Atsushi Sugawara, Daiji Okamura, Yuji Tsunekawa, Jun Wu,[...]. Cell 2015
161
18
25

Double-strand breaks of mouse muscle mtDNA promote large deletions similar to multiple mtDNA deletions in humans.
Sarika Srivastava, Carlos T Moraes. Hum Mol Genet 2005
121
17
23

Microhomology-mediated end joining is the principal mediator of double-strand break repair during mitochondrial DNA lesions.
Satish Kumar Tadi, Robin Sebastian, Sumedha Dahal, Ravi K Babu, Bibha Choudhary, Sathees C Raghavan. Mol Biol Cell 2016
76
17
23

Maintenance and Expression of Mammalian Mitochondrial DNA.
Claes M Gustafsson, Maria Falkenberg, Nils-Göran Larsson. Annu Rev Biochem 2016
291
17
23

Replication of vertebrate mitochondrial DNA entails transient ribonucleotide incorporation throughout the lagging strand.
Takehiro Yasukawa, Aurelio Reyes, Tricia J Cluett, Ming-Yao Yang, Mark Bowmaker, Howard T Jacobs, Ian J Holt. EMBO J 2006
160
17
23

Sequence and organization of the human mitochondrial genome.
S Anderson, A T Bankier, B G Barrell, M H de Bruijn, A R Coulson, J Drouin, I C Eperon, D P Nierlich, B A Roe, F Sanger,[...]. Nature 1981
6951
17
23

Linear mitochondrial DNA is rapidly degraded by components of the replication machinery.
Viktoriya Peeva, Daniel Blei, Genevieve Trombly, Sarah Corsi, Maciej J Szukszto, Pedro Rebelo-Guiomar, Payam A Gammage, Alexei P Kudin, Christian Becker, Janine Altmüller,[...]. Nat Commun 2018
72
17
23

Intra- and inter-molecular recombination of mitochondrial DNA after in vivo induction of multiple double-strand breaks.
Sandra R Bacman, Sion L Williams, Carlos T Moraes. Nucleic Acids Res 2009
83
16
22

What causes mitochondrial DNA deletions in human cells?
Kim J Krishnan, Amy K Reeve, David C Samuels, Patrick F Chinnery, John K Blackwood, Robert W Taylor, Sjoerd Wanrooij, Johannes N Spelbrink, Robert N Lightowlers, Doug M Turnbull. Nat Genet 2008
274
16
22

A direct repeat is a hotspot for large-scale deletion of human mitochondrial DNA.
E A Schon, R Rizzuto, C T Moraes, H Nakase, M Zeviani, S DiMauro. Science 1989
498
16
22

Near-complete elimination of mutant mtDNA by iterative or dynamic dose-controlled treatment with mtZFNs.
Payam A Gammage, Edoardo Gaude, Lindsey Van Haute, Pedro Rebelo-Guiomar, Christopher B Jackson, Joanna Rorbach, Marcin L Pekalski, Alan J Robinson, Marine Charpentier, Jean-Paul Concordet,[...]. Nucleic Acids Res 2016
56
15
26

In vivo occupancy of mitochondrial single-stranded DNA binding protein supports the strand displacement mode of DNA replication.
Javier Miralles Fusté, Yonghong Shi, Sjoerd Wanrooij, Xuefeng Zhu, Elisabeth Jemt, Örjan Persson, Nasim Sabouri, Claes M Gustafsson, Maria Falkenberg. PLoS Genet 2014
86
15
20

MitoTALEN: A General Approach to Reduce Mutant mtDNA Loads and Restore Oxidative Phosphorylation Function in Mitochondrial Diseases.
Masami Hashimoto, Sandra R Bacman, Susana Peralta, Marni J Falk, Anne Chomyn, David C Chan, Sion L Williams, Carlos T Moraes. Mol Ther 2015
92
15
20

Coupled leading- and lagging-strand synthesis of mammalian mitochondrial DNA.
I J Holt, H E Lorimer, H T Jacobs. Cell 2000
277
15
20

Loss-of-function mutations in MGME1 impair mtDNA replication and cause multisystemic mitochondrial disease.
Cornelia Kornblum, Thomas J Nicholls, Tobias B Haack, Susanne Schöler, Viktoriya Peeva, Katharina Danhauser, Kerstin Hallmann, Gábor Zsurka, Joanna Rorbach, Arcangela Iuso,[...]. Nat Genet 2013
141
14
19

Super-resolution microscopy reveals that mammalian mitochondrial nucleoids have a uniform size and frequently contain a single copy of mtDNA.
Christian Kukat, Christian A Wurm, Henrik Spåhr, Maria Falkenberg, Nils-Göran Larsson, Stefan Jakobs. Proc Natl Acad Sci U S A 2011
314
14
19

Mitochondrial Genome Engineering: The Revolution May Not Be CRISPR-Ized.
Payam A Gammage, Carlos T Moraes, Michal Minczuk. Trends Genet 2018
122
14
19

Two direct repeats cause most human mtDNA deletions.
David C Samuels, Eric A Schon, Patrick F Chinnery. Trends Genet 2004
131
14
19

MitoTALEN reduces mutant mtDNA load and restores tRNAAla levels in a mouse model of heteroplasmic mtDNA mutation.
Sandra R Bacman, Johanna H K Kauppila, Claudia V Pereira, Nadee Nissanka, Maria Miranda, Milena Pinto, Sion L Williams, Nils-Göran Larsson, James B Stewart, Carlos T Moraes. Nat Med 2018
107
14
19

Gene therapy for mitochondrial disease by delivering restriction endonuclease SmaI into mitochondria.
Masashi Tanaka, Harm-Jan Borgeld, Jin Zhang, Shin-ichi Muramatsu, Jian-Sheng Gong, Makoto Yoneda, Wakako Maruyama, Makoto Naoi, Tohru Ibi, Ko Sahashi,[...]. J Biomed Sci 2002
138
13
18

Manipulating mitochondrial DNA heteroplasmy by a mitochondrially targeted restriction endonuclease.
S Srivastava, C T Moraes. Hum Mol Genet 2001
118
13
18

Selective mitochondrial DNA degradation following double-strand breaks.
Amandine Moretton, Frédéric Morel, Bertil Macao, Philippe Lachaume, Layal Ishak, Mathilde Lefebvre, Isabelle Garreau-Balandier, Patrick Vernet, Maria Falkenberg, Géraldine Farge. PLoS One 2017
64
13
20

Prevalence of nuclear and mitochondrial DNA mutations related to adult mitochondrial disease.
Gráinne S Gorman, Andrew M Schaefer, Yi Ng, Nicholas Gomez, Emma L Blakely, Charlotte L Alston, Catherine Feeney, Rita Horvath, Patrick Yu-Wai-Man, Patrick F Chinnery,[...]. Ann Neurol 2015
440
13
18

Spontaneous Kearns-Sayre/chronic external ophthalmoplegia plus syndrome associated with a mitochondrial DNA deletion: a slip-replication model and metabolic therapy.
J M Shoffner, M T Lott, A S Voljavec, S A Soueidan, D A Costigan, D C Wallace. Proc Natl Acad Sci U S A 1989
427
13
18

Genome editing in mitochondria corrects a pathogenic mtDNA mutation in vivo.
Payam A Gammage, Carlo Viscomi, Marie-Lune Simard, Ana S H Costa, Edoardo Gaude, Christopher A Powell, Lindsey Van Haute, Beverly J McCann, Pedro Rebelo-Guiomar, Raffaele Cerutti,[...]. Nat Med 2018
123
13
18

Minimizing the damage: repair pathways keep mitochondrial DNA intact.
Lawrence Kazak, Aurelio Reyes, Ian J Holt. Nat Rev Mol Cell Biol 2012
229
12
16

Reconstitution of a minimal mtDNA replisome in vitro.
Jenny A Korhonen, Xuan Hoi Pham, Mina Pellegrini, Maria Falkenberg. EMBO J 2004
262
12
16

Development of a single-chain, quasi-dimeric zinc-finger nuclease for the selective degradation of mutated human mitochondrial DNA.
Michal Minczuk, Monika A Papworth, Jeffrey C Miller, Michael P Murphy, Aaron Klug. Nucleic Acids Res 2008
121
12
16

Copy-choice recombination during mitochondrial L-strand synthesis causes DNA deletions.
Örjan Persson, Yazh Muthukumar, Swaraj Basu, Louise Jenninger, Jay P Uhler, Anna-Karin Berglund, Robert McFarland, Robert W Taylor, Claes M Gustafsson, Erik Larsson,[...]. Nat Commun 2019
22
12
54

Linear mtDNA fragments and unusual mtDNA rearrangements associated with pathological deficiency of MGME1 exonuclease.
Thomas J Nicholls, Gábor Zsurka, Viktoriya Peeva, Susanne Schöler, Roman J Szczesny, Dominik Cysewski, Aurelio Reyes, Cornelia Kornblum, Monica Sciacco, Maurizio Moggio,[...]. Hum Mol Genet 2014
42
11
26

Mitochondrial RNA polymerase is needed for activation of the origin of light-strand DNA replication.
Javier Miralles Fusté, Sjoerd Wanrooij, Elisabeth Jemt, Caroline E Granycome, Tricia J Cluett, Yonghong Shi, Neli Atanassova, Ian J Holt, Claes M Gustafsson, Maria Falkenberg. Mol Cell 2010
127
11
15

Sequence-specific modification of mitochondrial DNA using a chimeric zinc finger methylase.
Michal Minczuk, Monika A Papworth, Paulina Kolasinska, Michael P Murphy, Aaron Klug. Proc Natl Acad Sci U S A 2006
102
11
15

Efficient Mitochondrial Genome Editing by CRISPR/Cas9.
Areum Jo, Sangwoo Ham, Gum Hwa Lee, Yun-Il Lee, SangSeong Kim, Yun-Song Lee, Joo-Ho Shin, Yunjong Lee. Biomed Res Int 2015
107
11
15

Modifying the Mitochondrial Genome.
Alexander N Patananan, Ting-Hsiang Wu, Pei-Yu Chiou, Michael A Teitell. Cell Metab 2016
72
11
15

Deletions of muscle mitochondrial DNA in patients with mitochondrial myopathies.
I J Holt, A E Harding, J A Morgan-Hughes. Nature 1988
1447
11
15

mitoTev-TALE: a monomeric DNA editing enzyme to reduce mutant mitochondrial DNA levels.
Claudia V Pereira, Sandra R Bacman, Tania Arguello, Ugne Zekonyte, Sion L Williams, David R Edgell, Carlos T Moraes. EMBO Mol Med 2018
37
11
29

Replication of mitochondrial DNA occurs by strand displacement with alternative light-strand origins, not via a strand-coupled mechanism.
Timothy A Brown, Ciro Cecconi, Ariana N Tkachuk, Carlos Bustamante, David A Clayton. Genes Dev 2005
131
10
13

Twinkle mutations associated with autosomal dominant progressive external ophthalmoplegia lead to impaired helicase function and in vivo mtDNA replication stalling.
Steffi Goffart, Helen M Cooper, Henna Tyynismaa, Sjoerd Wanrooij, Anu Suomalainen, Johannes N Spelbrink. Hum Mol Genet 2009
94
10
13

Mitochondrial DNA replication proceeds via a 'bootlace' mechanism involving the incorporation of processed transcripts.
Aurelio Reyes, Lawrence Kazak, Stuart R Wood, Takehiro Yasukawa, Howard T Jacobs, Ian J Holt. Nucleic Acids Res 2013
77
10
13

Mammalian mitochondrial DNA replicates bidirectionally from an initiation zone.
Mark Bowmaker, Ming Yao Yang, Takehiro Yasukawa, Aurelio Reyes, Howard T Jacobs, Joel A Huberman, Ian J Holt. J Biol Chem 2003
146
10
13

The dynamics of mitochondrial DNA heteroplasmy: implications for human health and disease.
James B Stewart, Patrick F Chinnery. Nat Rev Genet 2015
390
10
13

Oxidative stress induces degradation of mitochondrial DNA.
Inna Shokolenko, Natalia Venediktova, Alexandra Bochkareva, Glenn L Wilson, Mikhail F Alexeyev. Nucleic Acids Res 2009
307
10
13

Manipulation of mtDNA heteroplasmy in all striated muscles of newborn mice by AAV9-mediated delivery of a mitochondria-targeted restriction endonuclease.
S R Bacman, S L Williams, D Duan, C T Moraes. Gene Ther 2012
47
10
21

Topoisomerase 3α Is Required for Decatenation and Segregation of Human mtDNA.
Thomas J Nicholls, Cristina A Nadalutti, Elisa Motori, Ewen W Sommerville, Gráinne S Gorman, Swaraj Basu, Emily Hoberg, Doug M Turnbull, Patrick F Chinnery, Nils-Göran Larsson,[...]. Mol Cell 2018
56
10
17

Rapid directional shift of mitochondrial DNA heteroplasmy in animal tissues by a mitochondrially targeted restriction endonuclease.
Maria Pilar Bayona-Bafaluy, Bas Blits, Brendan J Battersby, Eric A Shoubridge, Carlos T Moraes. Proc Natl Acad Sci U S A 2005
104
10
13

Mitochondrial DNA-deletion mutations accumulate intracellularly to detrimental levels in aged human skeletal muscle fibers.
Entela Bua, Jody Johnson, Allen Herbst, Bridget Delong, Debbie McKenzie, Shahriar Salamat, Judd M Aiken. Am J Hum Genet 2006
286
10
13

Mitochondrial DNA mutations and human disease.
Helen A L Tuppen, Emma L Blakely, Douglass M Turnbull, Robert W Taylor. Biochim Biophys Acta 2010
374
10
13


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.

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