A citation-based method for searching scientific literature

Shira Sagie, Shir Toubiana, Stella R Hartono, Hagar Katzir, Aya Tzur-Gilat, Shany Havazelet, Claire Francastel, Guillaume Velasco, Frédéric Chédin, Sara Selig. Nat Commun 2017
Times Cited: 54







List of co-cited articles
766 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Telomeric repeat containing RNA and RNA surveillance factors at mammalian chromosome ends.
Claus M Azzalin, Patrick Reichenbach, Lela Khoriauli, Elena Giulotto, Joachim Lingner. Science 2007
813
66

RNaseH1 regulates TERRA-telomeric DNA hybrids and telomere maintenance in ALT tumour cells.
Rajika Arora, Yongwoo Lee, Harry Wischnewski, Catherine M Brun, Tobias Schwarz, Claus M Azzalin. Nat Commun 2014
198
64

CpG-island promoters drive transcription of human telomeres.
Solomon G Nergadze, Benjamin O Farnung, Harry Wischnewski, Lela Khoriauli, Valerio Vitelli, Raghav Chawla, Elena Giulotto, Claus M Azzalin. RNA 2009
149
51



Telomere Length Determines TERRA and R-Loop Regulation through the Cell Cycle.
Marco Graf, Diego Bonetti, Arianna Lockhart, Kamar Serhal, Vanessa Kellner, André Maicher, Pascale Jolivet, Maria Teresa Teixeira, Brian Luke. Cell 2017
111
38

TERRA RNA Antagonizes ATRX and Protects Telomeres.
Hsueh-Ping Chu, Catherine Cifuentes-Rojas, Barry Kesner, Eric Aeby, Hun-Goo Lee, Chunyao Wei, Hyun Jung Oh, Myriam Boukhali, Wilhelm Haas, Jeannie T Lee. Cell 2017
103
37

Telomere length regulates TERRA levels through increased trimethylation of telomeric H3K9 and HP1α.
Nausica Arnoult, Amandine Van Beneden, Anabelle Decottignies. Nat Struct Mol Biol 2012
153
35

Functional characterization of the TERRA transcriptome at damaged telomeres.
Antonio Porro, Sascha Feuerhahn, Julien Delafontaine, Harold Riethman, Jacques Rougemont, Joachim Lingner. Nat Commun 2014
133
35

TERRA RNA binding to TRF2 facilitates heterochromatin formation and ORC recruitment at telomeres.
Zhong Deng, Julie Norseen, Andreas Wiedmer, Harold Riethman, Paul M Lieberman. Mol Cell 2009
346
35

Telomeric noncoding RNA TERRA is induced by telomere shortening to nucleate telomerase molecules at short telomeres.
Emilio Cusanelli, Carmina Angelica Perez Romero, Pascal Chartrand. Mol Cell 2013
134
33

Telomeric RNA-DNA hybrids affect telomere-length dynamics and senescence.
Bettina Balk, André Maicher, Martina Dees, Julia Klermund, Sarah Luke-Glaser, Katharina Bender, Brian Luke. Nat Struct Mol Biol 2013
177
33


TERRA promotes telomerase-mediated telomere elongation in Schizosaccharomyces pombe.
Martin Moravec, Harry Wischnewski, Amadou Bah, Yan Hu, Na Liu, Lorenzo Lafranchi, Megan C King, Claus M Azzalin. EMBO Rep 2016
47
31

The Rat1p 5' to 3' exonuclease degrades telomeric repeat-containing RNA and promotes telomere elongation in Saccharomyces cerevisiae.
Brian Luke, Andrea Panza, Sophie Redon, Nahid Iglesias, Zhijian Li, Joachim Lingner. Mol Cell 2008
206
27

Telomeric RNAs are essential to maintain telomeres.
Juan José Montero, Isabel López de Silanes, Osvaldo Graña, Maria A Blasco. Nat Commun 2016
53
28

TERRA, CpG methylation and telomere heterochromatin: lessons from ICF syndrome cells.
Zhong Deng, Amy E Campbell, Paul M Lieberman. Cell Cycle 2010
64
25

Shelterin-Mediated Telomere Protection.
Titia de Lange. Annu Rev Genet 2018
217
25

The THO complex component Thp2 counteracts telomeric R-loops and telomere shortening.
Verena Pfeiffer, Jérôme Crittin, Larissa Grolimund, Joachim Lingner. EMBO J 2013
84
24

The epigenetic regulation of mammalian telomeres.
María A Blasco. Nat Rev Genet 2007
463
24

A role for CTCF and cohesin in subtelomere chromatin organization, TERRA transcription, and telomere end protection.
Zhong Deng, Zhuo Wang, Nick Stong, Robert Plasschaert, Aliah Moczan, Horng-Shen Chen, Sufeng Hu, Priyankara Wikramasinghe, Ramana V Davuluri, Marisa S Bartolomei,[...]. EMBO J 2012
104
24

Nuclear respiratory factor 1 and endurance exercise promote human telomere transcription.
Aurélie Diman, Joanna Boros, Florian Poulain, Julie Rodriguez, Marin Purnelle, Harikleia Episkopou, Luc Bertrand, Marc Francaux, Louise Deldicque, Anabelle Decottignies. Sci Adv 2016
44
29


Identification of TERRA locus unveils a telomere protection role through association to nearly all chromosomes.
Isabel López de Silanes, Osvaldo Graña, Maria Luigia De Bonis, Orlando Dominguez, David G Pisano, Maria A Blasco. Nat Commun 2014
54
24

Chromosome instability and immunodeficiency syndrome caused by mutations in a DNA methyltransferase gene.
G L Xu, T H Bestor, D Bourc'his, C L Hsieh, N Tommerup, M Bugge, M Hulten, X Qu, J J Russo, E Viegas-Péquignot. Nature 1999
824
22

Subtelomeric methylation distinguishes between subtypes of Immunodeficiency, Centromeric instability and Facial anomalies syndrome.
Shir Toubiana, Guillaume Velasco, Adi Chityat, Angela M Kaindl, Noam Hershtig, Aya Tzur-Gilat, Claire Francastel, Sara Selig. Hum Mol Genet 2018
18
66

R-loop formation is a distinctive characteristic of unmethylated human CpG island promoters.
Paul A Ginno, Paul L Lott, Holly C Christensen, Ian Korf, Frédéric Chédin. Mol Cell 2012
412
20

Subtelomeric CTCF and cohesin binding site organization using improved subtelomere assemblies and a novel annotation pipeline.
Nicholas Stong, Zhong Deng, Ravi Gupta, Sufen Hu, Shiela Paul, Amber K Weiner, Evan E Eichler, Tina Graves, Catrina C Fronick, Laura Courtney,[...]. Genome Res 2014
40
27

Characterization and rescue of telomeric abnormalities in ICF syndrome type I fibroblasts.
Shiran Yehezkel, Rony Shaked, Shira Sagie, Ron Berkovitz, Hofit Shachar-Bener, Yardena Segev, Sara Selig. Front Oncol 2013
24
45

Telomere functions grounding on TERRA firma.
Claus M Azzalin, Joachim Lingner. Trends Cell Biol 2015
112
20

Specific association of human telomerase activity with immortal cells and cancer.
N W Kim, M A Piatyszek, K R Prowse, C B Harley, M D West, P L Ho, G M Coviello, W E Wright, S L Weinrich, J W Shay. Science 1994
20

TERRA transcripts are bound by a complex array of RNA-binding proteins.
Isabel López de Silanes, Martina Stagno d'Alcontres, Maria A Blasco. Nat Commun 2010
94
20

The telomeric transcriptome of Schizosaccharomyces pombe.
Amadou Bah, Harry Wischnewski, Vadim Shchepachev, Claus M Azzalin. Nucleic Acids Res 2012
72
20

Alternative Lengthening of Telomeres is characterized by reduced compaction of telomeric chromatin.
Harikleia Episkopou, Irena Draskovic, Amandine Van Beneden, Gaëlle Tilman, Marina Mattiussi, Matthieu Gobin, Nausica Arnoult, Arturo Londoño-Vallejo, Anabelle Decottignies. Nucleic Acids Res 2014
99
20


Alternative lengthening of telomeres renders cancer cells hypersensitive to ATR inhibitors.
Rachel Litman Flynn, Kelli E Cox, Maya Jeitany, Hiroaki Wakimoto, Alysia R Bryll, Neil J Ganem, Francesca Bersani, Jose R Pineda, Mario L Suvà, Cyril H Benes,[...]. Science 2015
246
18

Induced pluripotent stem cells as a model for telomeric abnormalities in ICF type I syndrome.
Shira Sagie, Erika Ellran, Hagar Katzir, Rony Shaked, Shiran Yehezkel, Ilana Laevsky, Alaa Ghanayim, Dan Geiger, Maty Tzukerman, Sara Selig. Hum Mol Genet 2014
21
47



Telomerase activity is associated with an increase in DNA methylation at the proximal subtelomere and a reduction in telomeric transcription.
Laura J Ng, Jennifer E Cropley, Hilda A Pickett, Roger R Reddel, Catherine M Suter. Nucleic Acids Res 2009
102
18

Mammalian telomeres resemble fragile sites and require TRF1 for efficient replication.
Agnel Sfeir, Settapong T Kosiyatrakul, Dirk Hockemeyer, Sheila L MacRae, Jan Karlseder, Carl L Schildkraut, Titia de Lange. Cell 2009
640
18

TRF1 participates in chromosome end protection by averting TRF2-dependent telomeric R loops.
Yong Woo Lee, Rajika Arora, Harry Wischnewski, Claus M Azzalin. Nat Struct Mol Biol 2018
33
30

Expression and differential regulation of human TERRA at several chromosome ends.
Marianna Feretzaki, Patricia Renck Nunes, Joachim Lingner. RNA 2019
23
43

R loops: new modulators of genome dynamics and function.
José M Santos-Pereira, Andrés Aguilera. Nat Rev Genet 2015
366
16

The non-coding RNA TERRA is a natural ligand and direct inhibitor of human telomerase.
Sophie Redon, Patrick Reichenbach, Joachim Lingner. Nucleic Acids Res 2010
223
16

Super-resolution fluorescence imaging of telomeres reveals TRF2-dependent T-loop formation.
Ylli Doksani, John Y Wu, Titia de Lange, Xiaowei Zhuang. Cell 2013
265
16

Mutations in ZBTB24 are associated with immunodeficiency, centromeric instability, and facial anomalies syndrome type 2.
Jessica C de Greef, Jun Wang, Judit Balog, Johan T den Dunnen, Rune R Frants, Kirsten R Straasheijm, Caner Aytekin, Mirjam van der Burg, Laurence Duprez, Alina Ferster,[...]. Am J Hum Genet 2011
95
16

Mutations in CDCA7 and HELLS cause immunodeficiency-centromeric instability-facial anomalies syndrome.
Peter E Thijssen, Yuya Ito, Giacomo Grillo, Jun Wang, Guillaume Velasco, Hirohisa Nitta, Motoko Unoki, Minako Yoshihara, Mikita Suyama, Yu Sun,[...]. Nat Commun 2015
85
16

R loops: from transcription byproducts to threats to genome stability.
Andrés Aguilera, Tatiana García-Muse. Mol Cell 2012
559
14

Prevalent, Dynamic, and Conserved R-Loop Structures Associate with Specific Epigenomic Signatures in Mammals.
Lionel A Sanz, Stella R Hartono, Yoong Wearn Lim, Sandra Steyaert, Aparna Rajpurkar, Paul A Ginno, Xiaoqin Xu, Frédéric Chédin. Mol Cell 2016
221
14


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.