A citation-based method for searching scientific literature

Alan M Rice, Aoife McLysaght. Nat Commun 2017
Times Cited: 42







List of co-cited articles
226 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Ohnologs in the human genome are dosage balanced and frequently associated with disease.
Takashi Makino, Aoife McLysaght. Proc Natl Acad Sci U S A 2010
164
30

Dosage sensitivity and the evolution of gene families in yeast.
Balázs Papp, Csaba Pál, Laurence D Hurst. Nature 2003
565
21

Origins and functional impact of copy number variation in the human genome.
Donald F Conrad, Dalila Pinto, Richard Redon, Lars Feuk, Omer Gokcumen, Yujun Zhang, Jan Aerts, T Daniel Andrews, Chris Barnes, Peter Campbell,[...]. Nature 2010
19

Genome-wide deserts for copy number variation in vertebrates.
Takashi Makino, Aoife McLysaght, Masakado Kawata. Nat Commun 2013
27
29

Analysis of protein-coding genetic variation in 60,706 humans.
Monkol Lek, Konrad J Karczewski, Eric V Minikel, Kaitlin E Samocha, Eric Banks, Timothy Fennell, Anne H O'Donnell-Luria, James S Ware, Andrew J Hill, Beryl B Cummings,[...]. Nature 2016
19

A copy number variation map of the human genome.
Mehdi Zarrei, Jeffrey R MacDonald, Daniele Merico, Stephen W Scherer. Nat Rev Genet 2015
368
16

An integrated map of structural variation in 2,504 human genomes.
Peter H Sudmant, Tobias Rausch, Eugene J Gardner, Robert E Handsaker, Alexej Abyzov, John Huddleston, Yan Zhang, Kai Ye, Goo Jun, Markus Hsi-Yang Fritz,[...]. Nature 2015
936
16

Ohnologs are overrepresented in pathogenic copy number mutations.
Aoife McLysaght, Takashi Makino, Hannah M Grayton, Maria Tropeano, Kevin J Mitchell, Evangelos Vassos, David A Collier. Proc Natl Acad Sci U S A 2014
35
20

Gene balance hypothesis: connecting issues of dosage sensitivity across biological disciplines.
James A Birchler, Reiner A Veitia. Proc Natl Acad Sci U S A 2012
283
14

Global variation in copy number in the human genome.
Richard Redon, Shumpei Ishikawa, Karen R Fitch, Lars Feuk, George H Perry, T Daniel Andrews, Heike Fiegler, Michael H Shapero, Andrew R Carson, Wenwei Chen,[...]. Nature 2006
14

Consensus statement: chromosomal microarray is a first-tier clinical diagnostic test for individuals with developmental disabilities or congenital anomalies.
David T Miller, Margaret P Adam, Swaroop Aradhya, Leslie G Biesecker, Arthur R Brothman, Nigel P Carter, Deanna M Church, John A Crolla, Evan E Eichler, Charles J Epstein,[...]. Am J Hum Genet 2010
14

A global reference for human genetic variation.
Adam Auton, Lisa D Brooks, Richard M Durbin, Erik P Garrison, Hyun Min Kang, Jan O Korbel, Jonathan L Marchini, Shane McCarthy, Gil A McVean, Gonçalo R Abecasis. Nature 2015
11

The Database of Genomic Variants: a curated collection of structural variation in the human genome.
Jeffrey R MacDonald, Robert Ziman, Ryan K C Yuen, Lars Feuk, Stephen W Scherer. Nucleic Acids Res 2014
632
11

Gene duplication: a drive for phenotypic diversity and cause of human disease.
Bernard Conrad, Stylianos E Antonarakis. Annu Rev Genomics Hum Genet 2007
157
9

Dosage balance in gene regulation: biological implications.
James A Birchler, Nicole C Riddle, Donald L Auger, Reiner A Veitia. Trends Genet 2005
239
9

Patterns of genic intolerance of rare copy number variation in 59,898 human exomes.
Douglas M Ruderfer, Tymor Hamamsy, Monkol Lek, Konrad J Karczewski, David Kavanagh, Kaitlin E Samocha, Mark J Daly, Daniel G MacArthur, Menachem Fromer, Shaun M Purcell. Nat Genet 2016
108
9

A copy number variation morbidity map of developmental delay.
Gregory M Cooper, Bradley P Coe, Santhosh Girirajan, Jill A Rosenfeld, Tiffany H Vu, Carl Baker, Charles Williams, Heather Stalker, Rizwan Hamid, Vickie Hannig,[...]. Nat Genet 2011
803
9

Contribution of copy number variants to schizophrenia from a genome-wide study of 41,321 subjects.
Christian R Marshall, Daniel P Howrigan, Daniele Merico, Bhooma Thiruvahindrapuram, Wenting Wu, Douglas S Greer, Danny Antaki, Aniket Shetty, Peter A Holmans, Dalila Pinto,[...]. Nat Genet 2017
398
9

Intrinsic protein disorder and interaction promiscuity are widely associated with dosage sensitivity.
Tanya Vavouri, Jennifer I Semple, Rosa Garcia-Verdugo, Ben Lehner. Cell 2009
240
9

Reconstruction of the vertebrate ancestral genome reveals dynamic genome reorganization in early vertebrates.
Yoichiro Nakatani, Hiroyuki Takeda, Yuji Kohara, Shinichi Morishita. Genome Res 2007
314
9

The amphioxus genome and the evolution of the chordate karyotype.
Nicholas H Putnam, Thomas Butts, David E K Ferrier, Rebecca F Furlong, Uffe Hellsten, Takeshi Kawashima, Marc Robinson-Rechavi, Eiichi Shoguchi, Astrid Terry, Jr-Kai Yu,[...]. Nature 2008
9

The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons.
Ingo Braasch, Andrew R Gehrke, Jeramiah J Smith, Kazuhiko Kawasaki, Tereza Manousaki, Jeremy Pasquier, Angel Amores, Thomas Desvignes, Peter Batzel, Julian Catchen,[...]. Nat Genet 2016
276
9

The evolutionary significance of ancient genome duplications.
Yves Van de Peer, Steven Maere, Axel Meyer. Nat Rev Genet 2009
541
9

Population analysis of large copy number variants and hotspots of human genetic disease.
Andy Itsara, Gregory M Cooper, Carl Baker, Santhosh Girirajan, Jun Li, Devin Absher, Ronald M Krauss, Richard M Myers, Paul M Ridker, Daniel I Chasman,[...]. Am J Hum Genet 2009
417
9

Dosage sensitivity shapes the evolution of copy-number varied regions.
Benjamin Schuster-Böckler, Donald Conrad, Alex Bateman. PLoS One 2010
64
9




Dosage-sensitive genes in evolution and disease.
Alan M Rice, Aoife McLysaght. BMC Biol 2017
33
12



Exploring the role of copy number variants in human adaptation.
Rebecca C Iskow, Omer Gokcumen, Charles Lee. Trends Genet 2012
77
7

Duplication hotspots, rare genomic disorders, and common disease.
Heather C Mefford, Evan E Eichler. Curr Opin Genet Dev 2009
153
7

Global diversity, population stratification, and selection of human copy-number variation.
Peter H Sudmant, Swapan Mallick, Bradley J Nelson, Fereydoun Hormozdiari, Niklas Krumm, John Huddleston, Bradley P Coe, Carl Baker, Susanne Nordenfelt, Michael Bamshad,[...]. Science 2015
174
7


The complex relationship of gene duplication and essentiality.
Takashi Makino, Karsten Hokamp, Aoife McLysaght. Trends Genet 2009
65
7


Copy number variation in human health, disease, and evolution.
Feng Zhang, Wenli Gu, Matthew E Hurles, James R Lupski. Annu Rev Genomics Hum Genet 2009
693
7

All duplicates are not equal: the difference between small-scale and genome duplication.
Luke Hakes, John W Pinney, Simon C Lovell, Stephen G Oliver, David L Robertson. Genome Biol 2007
107
7

Cellular reactions to gene dosage imbalance: genomic, transcriptomic and proteomic effects.
Reiner A Veitia, Samuel Bottani, James A Birchler. Trends Genet 2008
178
7

Mechanisms underlying structural variant formation in genomic disorders.
Claudia M B Carvalho, James R Lupski. Nat Rev Genet 2016
268
7

Detection of large-scale variation in the human genome.
A John Iafrate, Lars Feuk, Miguel N Rivera, Marc L Listewnik, Patricia K Donahoe, Ying Qi, Stephen W Scherer, Charles Lee. Nat Genet 2004
7

Post-Translational Dosage Compensation Buffers Genetic Perturbations to Stoichiometry of Protein Complexes.
Koji Ishikawa, Koji Makanae, Shintaro Iwasaki, Nicholas T Ingolia, Hisao Moriya. PLoS Genet 2017
33
9



Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype.
Olivier Jaillon, Jean-Marc Aury, Frédéric Brunet, Jean-Louis Petit, Nicole Stange-Thomann, Evan Mauceli, Laurence Bouneau, Cécile Fischer, Catherine Ozouf-Costaz, Alain Bernot,[...]. Nature 2004
7


Challenges in clinical interpretation of microduplications detected by array CGH analysis.
Pawel Stankiewicz, Amber N Pursley, Sau Wai Cheung. Am J Med Genet A 2010
25
12

Large-scale copy number polymorphism in the human genome.
Jonathan Sebat, B Lakshmi, Jennifer Troge, Joan Alexander, Janet Young, Pär Lundin, Susanne Månér, Hillary Massa, Megan Walker, Maoyen Chi,[...]. Science 2004
7

Human dominant disease genes are enriched in paralogs originating from whole genome duplication.
Param Priya Singh, Séverine Affeldt, Giulia Malaguti, Hervé Isambert. PLoS Comput Biol 2014
17
17


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.