A citation-based method for searching scientific literature

Tooka Aavani, Nobuhiko Tachibana, Valerie Wallace, Jeffrey Biernaskie, Carol Schuurmans. Gene Expr Patterns 2017
Times Cited: 8







List of co-cited articles
38 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Self-formation of optic cups and storable stratified neural retina from human ESCs.
Tokushige Nakano, Satoshi Ando, Nozomu Takata, Masako Kawada, Keiko Muguruma, Kiyotoshi Sekiguchi, Koichi Saito, Shigenobu Yonemura, Mototsugu Eiraku, Yoshiki Sasai. Cell Stem Cell 2012
756
37

Thyroid hormone signaling specifies cone subtypes in human retinal organoids.
Kiara C Eldred, Sarah E Hadyniak, Katarzyna A Hussey, Boris Brenerman, Ping-Wu Zhang, Xitiz Chamling, Valentin M Sluch, Derek S Welsbie, Samer Hattar, James Taylor,[...]. Science 2018
80
37

NRL-Regulated Transcriptome Dynamics of Developing Rod Photoreceptors.
Jung-Woong Kim, Hyun-Jin Yang, Matthew John Brooks, Lina Zelinger, Gökhan Karakülah, Norimoto Gotoh, Alexis Boleda, Linn Gieser, Felipe Giuste, Dustin Thad Whitaker,[...]. Cell Rep 2016
59
25

Molecular Anatomy of the Developing Human Retina.
Akina Hoshino, Rinki Ratnapriya, Matthew J Brooks, Vijender Chaitankar, Matthew S Wilken, Chi Zhang, Margaret R Starostik, Linn Gieser, Anna La Torre, Mario Nishio,[...]. Dev Cell 2017
98
25

Transcriptional regulation of photoreceptor development and homeostasis in the mammalian retina.
Anand Swaroop, Douglas Kim, Douglas Forrest. Nat Rev Neurosci 2010
329
25

Transcriptional code and disease map for adult retinal cell types.
Sandra Siegert, Erik Cabuy, Brigitte Gross Scherf, Hubertus Kohler, Satchidananda Panda, Yun-Zheng Le, Hans Jörg Fehling, Dimos Gaidatzis, Michael B Stadler, Botond Roska. Nat Neurosci 2012
178
25

A transient wave of BMP signaling in the retina is necessary for Müller glial differentiation.
Yumi Ueki, Matthew S Wilken, Kristen E Cox, Laura B Chipman, Olivia Bermingham-McDonogh, Thomas A Reh. Development 2015
21
25


Melanopsin-dependent photoreception provides earliest light detection in the mammalian retina.
S Sekaran, D Lupi, S L Jones, C J Sheely, S Hattar, K-W Yau, R J Lucas, R G Foster, M W Hankins. Curr Biol 2005
134
25


A direct and melanopsin-dependent fetal light response regulates mouse eye development.
Sujata Rao, Christina Chun, Jieqing Fan, J Matthew Kofron, Michael B Yang, Rashmi S Hegde, Napoleone Ferrara, David R Copenhagen, Richard A Lang. Nature 2013
109
25

Expression and localization of bestrophin during normal mouse development.
Benjamin Bakall, Lihua Y Marmorstein, George Hoppe, Neal S Peachey, Claes Wadelius, Alan D Marmorstein. Invest Ophthalmol Vis Sci 2003
77
25

A subset of ipRGCs regulates both maturation of the circadian clock and segregation of retinogeniculate projections in mice.
Kylie S Chew, Jordan M Renna, David S McNeill, Diego C Fernandez, William T Keenan, Michael B Thomsen, Jennifer L Ecker, Gideon S Loevinsohn, Cassandra VanDunk, Daniel C Vicarel,[...]. Elife 2017
34
25

Melanopsin ganglion cell outer retinal dendrites: Morphologically distinct and asymmetrically distributed in the mouse retina.
Katelyn B Sondereker, Jessica R Onyak, Shakib W Islam, Christopher L Ross, Jordan M Renna. J Comp Neurol 2017
10
25



Melanopsin ganglion cells extend dendrites into the outer retina during early postnatal development.
Jordan M Renna, Deepa K Chellappa, Christopher L Ross, Maureen E Stabio, David M Berson. Dev Neurobiol 2015
12
25

The murine cone photoreceptor: a single cone type expresses both S and M opsins with retinal spatial patterning.
M L Applebury, M P Antoch, L C Baxter, L L Chun, J D Falk, F Farhangfar, K Kage, M G Krzystolik, L A Lyass, J T Robbins. Neuron 2000
395
25

Recruitment of Rod Photoreceptors from Short-Wavelength-Sensitive Cones during the Evolution of Nocturnal Vision in Mammals.
Jung-Woong Kim, Hyun-Jin Yang, Adam Phillip Oel, Matthew John Brooks, Li Jia, David Charles Plachetzki, Wei Li, William Ted Allison, Anand Swaroop. Dev Cell 2016
64
25

Retinal transplantation of photoreceptors results in donor-host cytoplasmic exchange.
Tiago Santos-Ferreira, Sílvia Llonch, Oliver Borsch, Kai Postel, Jochen Haas, Marius Ader. Nat Commun 2016
142
25

Establishment of a cone photoreceptor transplantation platform based on a novel cone-GFP reporter mouse line.
Sheila Smiley, Philip E Nickerson, Lacrimioara Comanita, Narsis Daftarian, Ahmed El-Sehemy, En Leh Samuel Tsai, Stuart Matan-Lithwick, Keqin Yan, Sherry Thurig, Yacine Touahri,[...]. Sci Rep 2016
35
25

Cone-rod homeobox CRX controls presynaptic active zone formation in photoreceptors of mammalian retina.
Juthaporn Assawachananont, Soo-Young Kim, Koray D Kaya, Robert Fariss, Jerome E Roger, Anand Swaroop. Hum Mol Genet 2018
10
25

Targeting of GFP to newborn rods by Nrl promoter and temporal expression profiling of flow-sorted photoreceptors.
Masayuki Akimoto, Hong Cheng, Dongxiao Zhu, Joseph A Brzezinski, Ritu Khanna, Elena Filippova, Edwin C T Oh, Yuezhou Jing, Jose-Luis Linares, Matthew Brooks,[...]. Proc Natl Acad Sci U S A 2006
232
25

Müller glia activation in response to inherited retinal degeneration is highly varied and disease-specific.
Claire Hippert, Anna B Graca, Amanda C Barber, Emma L West, Alexander J Smith, Robin R Ali, Rachael A Pearson. PLoS One 2015
63
25

Single-Cell RNA-Seq Analysis of Retinal Development Identifies NFI Factors as Regulating Mitotic Exit and Late-Born Cell Specification.
Brian S Clark, Genevieve L Stein-O'Brien, Fion Shiau, Gabrielle H Cannon, Emily Davis-Marcisak, Thomas Sherman, Clayton P Santiago, Thanh V Hoang, Fatemeh Rajaii, Rebecca E James-Esposito,[...]. Neuron 2019
114
25

Characterization and Transplantation of CD73-Positive Photoreceptors Isolated from Human iPSC-Derived Retinal Organoids.
Giuliana Gagliardi, Karim Ben M'Barek, Antoine Chaffiol, Amélie Slembrouck-Brec, Jean-Baptiste Conart, Céline Nanteau, Oriane Rabesandratana, José-Alain Sahel, Jens Duebel, Gael Orieux,[...]. Stem Cell Reports 2018
61
25

Generation of Storable Retinal Organoids and Retinal Pigmented Epithelium from Adherent Human iPS Cells in Xeno-Free and Feeder-Free Conditions.
Sacha Reichman, Amélie Slembrouck, Giuliana Gagliardi, Antoine Chaffiol, Angélique Terray, Céline Nanteau, Anais Potey, Morgane Belle, Oriane Rabesandratana, Jens Duebel,[...]. Stem Cells 2017
99
25

Making the gradient: thyroid hormone regulates cone opsin expression in the developing mouse retina.
Melanie R Roberts, Maya Srinivas, Douglas Forrest, Gabriella Morreale de Escobar, Thomas A Reh. Proc Natl Acad Sci U S A 2006
171
25

NRL-/- gene edited human embryonic stem cells generate rod-deficient retinal organoids enriched in S-cone-like photoreceptors.
Elisa Cuevas, Daniel L Holder, Ashwak H Alshehri, Julie Tréguier, Jörn Lakowski, Jane C Sowden. Stem Cells 2021
5
40

Optic vesicle-like structures derived from human pluripotent stem cells facilitate a customized approach to retinal disease treatment.
Jason S Meyer, Sara E Howden, Kyle A Wallace, Amelia D Verhoeven, Lynda S Wright, Elizabeth E Capowski, Isabel Pinilla, Jessica M Martin, Shulan Tian, Ron Stewart,[...]. Stem Cells 2011
275
25

Generation of three-dimensional retinal tissue with functional photoreceptors from human iPSCs.
Xiufeng Zhong, Christian Gutierrez, Tian Xue, Christopher Hampton, M Natalia Vergara, Li-Hui Cao, Ann Peters, Tea Soon Park, Elias T Zambidis, Jason S Meyer,[...]. Nat Commun 2014
427
25

Isolation and Comparative Transcriptome Analysis of Human Fetal and iPSC-Derived Cone Photoreceptor Cells.
Emily Welby, Jorn Lakowski, Valentina Di Foggia, Dimitri Budinger, Anai Gonzalez-Cordero, Aaron T L Lun, Michael Epstein, Aara Patel, Elisa Cuevas, Kamil Kruczek,[...]. Stem Cell Reports 2017
52
25

IGF-1 Signaling Plays an Important Role in the Formation of Three-Dimensional Laminated Neural Retina and Other Ocular Structures From Human Embryonic Stem Cells.
Carla B Mellough, Joseph Collin, Mahmoud Khazim, Kathryn White, Evelyne Sernagor, David H W Steel, Majlinda Lako. Stem Cells 2015
76
25

CRX Expression in Pluripotent Stem Cell-Derived Photoreceptors Marks a Transplantable Subpopulation of Early Cones.
Joseph Collin, Darin Zerti, Rachel Queen, Tiago Santos-Ferreira, Roman Bauer, Jonathan Coxhead, Rafiqul Hussain, David Steel, Carla Mellough, Marius Ader,[...]. Stem Cells 2019
27
25

Phenotypic and Functional Characterization of Müller Glia Isolated from Induced Pluripotent Stem Cell-Derived Retinal Organoids: Improvement of Retinal Ganglion Cell Function upon Transplantation.
Karen Eastlake, Weixin Wang, Hari Jayaram, Celia Murray-Dunning, Amanda J F Carr, Conor M Ramsden, Anthony Vugler, Katrina Gore, Nadine Clemo, Mark Stewart,[...]. Stem Cells Transl Med 2019
18
25

Characterization of Three-Dimensional Retinal Tissue Derived from Human Embryonic Stem Cells in Adherent Monolayer Cultures.
Ratnesh K Singh, Ramya K Mallela, Pamela K Cornuet, Aaron N Reifler, Andrew P Chervenak, Michael D West, Kwoon Y Wong, Igor O Nasonkin. Stem Cells Dev 2015
31
25

Investigating cone photoreceptor development using patient-derived NRL null retinal organoids.
Alyssa Kallman, Elizabeth E Capowski, Jie Wang, Aniruddha M Kaushik, Alex D Jansen, Kimberly L Edwards, Liben Chen, Cynthia A Berlinicke, M Joseph Phillips, Eric A Pierce,[...]. Commun Biol 2020
26
25

Recapitulation of Human Retinal Development from Human Pluripotent Stem Cells Generates Transplantable Populations of Cone Photoreceptors.
Anai Gonzalez-Cordero, Kamil Kruczek, Arifa Naeem, Milan Fernando, Magdalena Kloc, Joana Ribeiro, Debbie Goh, Yanai Duran, Samuel J I Blackford, Laura Abelleira-Hervas,[...]. Stem Cell Reports 2017
97
25

The product of the H19 gene may function as an RNA.
C I Brannan, E C Dees, R S Ingram, S M Tilghman. Mol Cell Biol 1990
786
12

Macular dystrophy associated with the A3243G mitochondrial DNA mutation. Distinct retinal and associated features, disease variability, and characterization of asymptomatic family members.
Michel Michaelides, Sharon A Jenkins, Doris-Eva Bamiou, Mary G Sweeney, Mary B Davis, Linda Luxon, Alan C Bird, Pamela P Rath. Arch Ophthalmol 2008
41
12

DICER1 deficit induces Alu RNA toxicity in age-related macular degeneration.
Hiroki Kaneko, Sami Dridi, Valeria Tarallo, Bradley D Gelfand, Benjamin J Fowler, Won Gil Cho, Mark E Kleinman, Steven L Ponicsan, William W Hauswirth, Vince A Chiodo,[...]. Nature 2011
409
12

Conserved microRNA pathway regulates developmental timing of retinal neurogenesis.
Anna La Torre, Sean Georgi, Thomas A Reh. Proc Natl Acad Sci U S A 2013
141
12

Functional architecture of the retina: development and disease.
Mrinalini Hoon, Haruhisa Okawa, Luca Della Santina, Rachel O L Wong. Prog Retin Eye Res 2014
197
12

Mutations of VMD2 splicing regulators cause nanophthalmos and autosomal dominant vitreoretinochoroidopathy (ADVIRC).
Jill Yardley, Bart P Leroy, Niki Hart-Holden, Bart A Lafaut, Bart Loeys, Ludwine M Messiaen, Rahat Perveen, M Ashwin Reddy, Shomi S Bhattacharya, Elias Traboulsi,[...]. Invest Ophthalmol Vis Sci 2004
145
12


Genome-wide mRNA analysis reveals a TUBD1 isoform profile as a potential biomarker for diabetic retinopathy development.
Vanessa Villegas-Ruiz, Ferdinand Hendlmeier, Beatriz Buentello-Volante, José L Rodríguez-Loaiza, Antonio Miranda-Duarte, Juan C Zenteno. Exp Eye Res 2017
4
25

Dynamic landscape of alternative polyadenylation during retinal development.
Wenyan Hu, Shengguo Li, Ji Yeon Park, Sridhar Boppana, Ting Ni, Miaoxin Li, Jun Zhu, Bin Tian, Zhi Xie, Mengqing Xiang. Cell Mol Life Sci 2017
14
12

In vitro and in vivo rescue of aberrant splicing in CEP290-associated LCA by antisense oligonucleotide delivery.
Alejandro Garanto, Daniel C Chung, Lonneke Duijkers, Julio C Corral-Serrano, Muriël Messchaert, Ru Xiao, Jean Bennett, Luk H Vandenberghe, Rob W J Collin. Hum Mol Genet 2016
77
12

Mutations within the rhodopsin gene in patients with autosomal dominant retinitis pigmentosa.
T P Dryja, T L McGee, L B Hahn, G S Cowley, J E Olsson, E Reichel, M A Sandberg, E L Berson. N Engl J Med 1990
343
12



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.