A citation-based method for searching scientific literature

Jean Louis Raisaro, Florian Tramèr, Zhanglong Ji, Diyue Bu, Yongan Zhao, Knox Carey, David Lloyd, Heidi Sofia, Dixie Baker, Paul Flicek, Suyash Shringarpure, Carlos Bustamante, Shuang Wang, Xiaoqian Jiang, Lucila Ohno-Machado, Haixu Tang, XiaoFeng Wang, Jean-Pierre Hubaux. J Am Med Inform Assoc 2017
Times Cited: 34







List of co-cited articles
114 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Privacy Risks from Genomic Data-Sharing Beacons.
Suyash S Shringarpure, Carlos D Bustamante. Am J Hum Genet 2015
80
76

Resolving individuals contributing trace amounts of DNA to highly complex mixtures using high-density SNP genotyping microarrays.
Nils Homer, Szabolcs Szelinger, Margot Redman, David Duggan, Waibhav Tembe, Jill Muehling, John V Pearson, Dietrich A Stephan, Stanley F Nelson, David W Craig. PLoS Genet 2008
451
67

Identifying personal genomes by surname inference.
Melissa Gymrek, Amy L McGuire, David Golan, Eran Halperin, Yaniv Erlich. Science 2013
475
58

Routes for breaching and protecting genetic privacy.
Yaniv Erlich, Arvind Narayanan. Nat Rev Genet 2014
143
32

Genomic privacy and limits of individual detection in a pool.
Sriram Sankararaman, Guillaume Obozinski, Michael I Jordan, Eran Halperin. Nat Genet 2009
68
29

PRINCESS: Privacy-protecting Rare disease International Network Collaboration via Encryption through Software guard extensionS.
Feng Chen, Shuang Wang, Xiaoqian Jiang, Sijie Ding, Yao Lu, Jihoon Kim, S Cenk Sahinalp, Chisato Shimizu, Jane C Burns, Victoria J Wright,[...]. Bioinformatics 2017
36
29

Privacy in the Genomic Era.
Muhammad Naveed, Erman Ayday, Ellen W Clayton, Jacques Fellay, Carl A Gunter, Jean-Pierre Hubaux, Bradley A Malin, Xiaofeng Wang. ACM Comput Surv 2015
58
26

Genetics. Genomic research and human subject privacy.
Zhen Lin, Art B Owen, Russ B Altman. Science 2004
181
26


Aftermath of bustamante attack on genomic beacon service.
Md Momin Al Aziz, Reza Ghasemi, Md Waliullah, Noman Mohammed. BMC Med Genomics 2017
9
88

Controlling the signal: Practical privacy protection of genomic data sharing through Beacon services.
Zhiyu Wan, Yevgeniy Vorobeychik, Murat Kantarcioglu, Bradley Malin. BMC Med Genomics 2017
10
80

Re-identification of individuals in genomic data-sharing beacons via allele inference.
Nora von Thenen, Erman Ayday, A Ercument Cicek. Bioinformatics 2019
15
53

Expanding Access to Large-Scale Genomic Data While Promoting Privacy: A Game Theoretic Approach.
Zhiyu Wan, Yevgeniy Vorobeychik, Weiyi Xia, Ellen Wright Clayton, Murat Kantarcioglu, Bradley Malin. Am J Hum Genet 2017
15
46

A global reference for human genetic variation.
Adam Auton, Lisa D Brooks, Richard M Durbin, Erik P Garrison, Hyun Min Kang, Jan O Korbel, Jonathan L Marchini, Shane McCarthy, Gil A McVean, Gonçalo R Abecasis. Nature 2015
20


Identification of individuals by trait prediction using whole-genome sequencing data.
Christoph Lippert, Riccardo Sabatini, M Cyrus Maher, Eun Yong Kang, Seunghak Lee, Okan Arikan, Alena Harley, Axel Bernal, Peter Garst, Victor Lavrenko,[...]. Proc Natl Acad Sci U S A 2017
47
20

Deriving genomic diagnoses without revealing patient genomes.
Karthik A Jagadeesh, David J Wu, Johannes A Birgmeier, Dan Boneh, Gill Bejerano. Science 2017
32
18

HEALER: homomorphic computation of ExAct Logistic rEgRession for secure rare disease variants analysis in GWAS.
Shuang Wang, Yuchen Zhang, Wenrui Dai, Kristin Lauter, Miran Kim, Yuzhe Tang, Hongkai Xiong, Xiaoqian Jiang. Bioinformatics 2016
40
17

An Inference Attack on Genomic Data Using Kinship, Complex Correlations, and Phenotype Information.
Iman Deznabi, Mohammad Mobayen, Nazanin Jafari, Oznur Tastan, Erman Ayday. IEEE/ACM Trans Comput Biol Bioinform 2018
9
55

A community effort to protect genomic data sharing, collaboration and outsourcing.
Shuang Wang, Xiaoqian Jiang, Haixu Tang, Xiaofeng Wang, Diyue Bu, Knox Carey, Stephanie Om Dyke, Dov Fox, Chao Jiang, Kristin Lauter,[...]. NPJ Genom Med 2017
12
41

Federated discovery and sharing of genomic data using Beacons.
Marc Fiume, Miroslav Cupak, Stephen Keenan, Jordi Rambla, Sabela de la Torre, Stephanie O M Dyke, Anthony J Brookes, Knox Carey, David Lloyd, Peter Goodhand,[...]. Nat Biotechnol 2019
25
20

Assessing and managing risk when sharing aggregate genetic variant data.
David W Craig, Robert M Goor, Zhenyuan Wang, Justin Paschall, Jim Ostell, Michael Feolo, Stephen T Sherry, Teri A Manolio. Nat Rev Genet 2011
33
12

Protecting aggregate genomic data.
Elias A Zerhouni, Elizabeth G Nabel. Science 2008
38
11

Genome privacy: challenges, technical approaches to mitigate risk, and ethical considerations in the United States.
Shuang Wang, Xiaoqian Jiang, Siddharth Singh, Rebecca Marmor, Luca Bonomi, Dov Fox, Michelle Dow, Lucila Ohno-Machado. Ann N Y Acad Sci 2017
22
18



Efficient privacy-preserving string search and an application in genomics.
Kana Shimizu, Koji Nuida, Gunnar Rätsch. Bioinformatics 2016
13
30

Private predictive analysis on encrypted medical data.
Joppe W Bos, Kristin Lauter, Michael Naehrig. J Biomed Inform 2014
32
12

FORESEE: Fully Outsourced secuRe gEnome Study basEd on homomorphic Encryption.
Yuchen Zhang, Wenrui Dai, Xiaoqian Jiang, Hongkai Xiong, Shuang Wang. BMC Med Inform Decis Mak 2015
21
19

Private queries on encrypted genomic data.
Gizem S Çetin, Hao Chen, Kim Laine, Kristin Lauter, Peter Rindal, Yuhou Xia. BMC Med Genomics 2017
5
80

Efficient and secure outsourcing of genomic data storage.
João Sá Sousa, Cédric Lefebvre, Zhicong Huang, Jean Louis Raisaro, Carlos Aguilar-Melchor, Marc-Olivier Killijian, Jean-Pierre Hubaux. BMC Med Genomics 2017
7
57

Differentially private genome data dissemination through top-down specialization.
Shuang Wang, Noman Mohammed, Rui Chen. BMC Med Inform Decis Mak 2014
16
25

PREMIX: PRivacy-preserving EstiMation of Individual admiXture.
Feng Chen, Michelle Dow, Sijie Ding, Yao Lu, Xiaoqian Jiang, Hua Tang, Shuang Wang. AMIA Annu Symp Proc 2017
10
40

A new way to protect privacy in large-scale genome-wide association studies.
Liina Kamm, Dan Bogdanov, Sven Laur, Jaak Vilo. Bioinformatics 2013
35
11

PRESAGE: PRivacy-preserving gEnetic testing via SoftwAre Guard Extension.
Feng Chen, Chenghong Wang, Wenrui Dai, Xiaoqian Jiang, Noman Mohammed, Md Momin Al Aziz, Md Nazmus Sadat, Cenk Sahinalp, Kristin Lauter, Shuang Wang. BMC Med Genomics 2017
14
28

Privacy-preserving GWAS analysis on federated genomic datasets.
Scott D Constable, Yuzhe Tang, Shuang Wang, Xiaoqian Jiang, Steve Chapin. BMC Med Inform Decis Mak 2015
19
21

Protecting genomic data analytics in the cloud: state of the art and opportunities.
Haixu Tang, Xiaoqian Jiang, Xiaofeng Wang, Shuang Wang, Heidi Sofia, Dov Fox, Kristin Lauter, Bradley Malin, Amalio Telenti, Li Xiong,[...]. BMC Med Genomics 2016
17
23

Privacy-preserving genomic testing in the clinic: a model using HIV treatment.
Paul J McLaren, Jean Louis Raisaro, Manel Aouri, Margalida Rotger, Erman Ayday, István Bartha, Maria B Delgado, Yannick Vallet, Huldrych F Günthard, Matthias Cavassini,[...]. Genet Med 2016
20
20


A systematic review of re-identification attacks on health data.
Khaled El Emam, Elizabeth Jonker, Luk Arbuckle, Bradley Malin. PLoS One 2011
109
11

Secure genome-wide association analysis using multiparty computation.
Hyunghoon Cho, David J Wu, Bonnie Berger. Nat Biotechnol 2018
31
12

Harvard Personal Genome Project: lessons from participatory public research.
Madeleine P Ball, Jason R Bobe, Michael F Chou, Tom Clegg, Preston W Estep, Jeantine E Lunshof, Ward Vandewege, Alexander Zaranek, George M Church. Genome Med 2014
51
8

A new initiative on precision medicine.
Francis S Collins, Harold Varmus. N Engl J Med 2015
8

Patients' views on identifiability of samples and informed consent for genetic research.
Sara Chandros Hull, Richard R Sharp, Jeffrey R Botkin, Mark Brown, Mark Hughes, Jeremy Sugarman, Debra Schwinn, Pamela Sankar, Dragana Bolcic-Jankovic, Brian R Clarridge,[...]. Am J Bioeth 2008
81
8

Enabling Privacy-Preserving GWASs in Heterogeneous Human Populations.
Sean Simmons, Cenk Sahinalp, Bonnie Berger. Cell Syst 2016
18
16

The Matchmaker Exchange: a platform for rare disease gene discovery.
Anthony A Philippakis, Danielle R Azzariti, Sergi Beltran, Anthony J Brookes, Catherine A Brownstein, Michael Brudno, Han G Brunner, Orion J Buske, Knox Carey, Cassie Doll,[...]. Hum Mutat 2015
231
8

Privacy-Preserving Data Sharing for Genome-Wide Association Studies.
Caroline Uhlerop, Aleksandra Slavković, Stephen E Fienberg. J Priv Confid 2013
21
14

Secure searching of biomarkers through hybrid homomorphic encryption scheme.
Miran Kim, Yongsoo Song, Jung Hee Cheon. BMC Med Genomics 2017
5
60

A privacy-preserving solution for compressed storage and selective retrieval of genomic data.
Zhicong Huang, Erman Ayday, Huang Lin, Raeka S Aiyar, Adam Molyneaux, Zhenyu Xu, Jacques Fellay, Lars M Steinmetz, Jean-Pierre Hubaux. Genome Res 2016
12
25

Secure approximation of edit distance on genomic data.
Md Momin Al Aziz, Dima Alhadidi, Noman Mohammed. BMC Med Genomics 2017
7
42


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.