A citation-based method for searching scientific literature

Paul Lacaze, Joanne Ryan, Robyn Woods, Ingrid Winship, John McNeil. J Med Ethics 2017
Times Cited: 7







List of co-cited articles
17 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Recommendations for reporting of secondary findings in clinical exome and genome sequencing, 2016 update (ACMG SF v2.0): a policy statement of the American College of Medical Genetics and Genomics.
Sarah S Kalia, Kathy Adelman, Sherri J Bale, Wendy K Chung, Christine Eng, James P Evans, Gail E Herman, Sophia B Hufnagel, Teri E Klein, Bruce R Korf,[...]. Genet Med 2017
842
57

Analysis of protein-coding genetic variation in 60,706 humans.
Monkol Lek, Konrad J Karczewski, Eric V Minikel, Kaitlin E Samocha, Eric Banks, Timothy Fennell, Anne H O'Donnell-Luria, James S Ware, Andrew J Hill, Beryl B Cummings,[...]. Nature 2016
57

Baseline Characteristics of Participants in the ASPREE (ASPirin in Reducing Events in the Elderly) Study.
John J McNeil, Robyn L Woods, Mark R Nelson, Anne M Murray, Christopher M Reid, Brenda Kirpach, Elsdon Storey, Raj C Shah, Rory S Wolfe, Andrew M Tonkin,[...]. J Gerontol A Biol Sci Med Sci 2017
72
57


Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.
Sue Richards, Nazneen Aziz, Sherri Bale, David Bick, Soma Das, Julie Gastier-Foster, Wayne W Grody, Madhuri Hegde, Elaine Lyon, Elaine Spector,[...]. Genet Med 2015
42

Actionable, pathogenic incidental findings in 1,000 participants' exomes.
Michael O Dorschner, Laura M Amendola, Emily H Turner, Peggy D Robertson, Brian H Shirts, Carlos J Gallego, Robin L Bennett, Kelly L Jones, Mari J Tokita, James T Bennett,[...]. Am J Hum Genet 2013
268
28


Deep sequencing of 10,000 human genomes.
Amalio Telenti, Levi C T Pierce, William H Biggs, Julia di Iulio, Emily H M Wong, Martin M Fabani, Ewen F Kirkness, Ahmed Moustafa, Naisha Shah, Chao Xie,[...]. Proc Natl Acad Sci U S A 2016
167
28

Deleterious- and disease-allele prevalence in healthy individuals: insights from current predictions, mutation databases, and population-scale resequencing.
Yali Xue, Yuan Chen, Qasim Ayub, Ni Huang, Edward V Ball, Matthew Mort, Andrew D Phillips, Katy Shaw, Peter D Stenson, David N Cooper,[...]. Am J Hum Genet 2012
183
28

Pathogenic variant burden in the ExAC database: an empirical approach to evaluating population data for clinical variant interpretation.
Yuya Kobayashi, Shan Yang, Keith Nykamp, John Garcia, Stephen E Lincoln, Scott E Topper. Genome Med 2017
93
28

Actionable exomic incidental findings in 6503 participants: challenges of variant classification.
Laura M Amendola, Michael O Dorschner, Peggy D Robertson, Joseph S Salama, Ragan Hart, Brian H Shirts, Mitzi L Murray, Mari J Tokita, Carlos J Gallego, Daniel Seung Kim,[...]. Genome Res 2015
225
28

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data.
Kai Wang, Mingyao Li, Hakon Hakonarson. Nucleic Acids Res 2010
28

ACMG recommendations for reporting of incidental findings in clinical exome and genome sequencing.
Robert C Green, Jonathan S Berg, Wayne W Grody, Sarah S Kalia, Bruce R Korf, Christa L Martin, Amy L McGuire, Robert L Nussbaum, Julianne M O'Daniel, Kelly E Ormond,[...]. Genet Med 2013
28


Association of Arrhythmia-Related Genetic Variants With Phenotypes Documented in Electronic Medical Records.
Sara L Van Driest, Quinn S Wells, Sarah Stallings, William S Bush, Adam Gordon, Deborah A Nickerson, Jerry H Kim, David R Crosslin, Gail P Jarvik, David S Carrell,[...]. JAMA 2016
114
28

ClinVar: public archive of relationships among sequence variation and human phenotype.
Melissa J Landrum, Jennifer M Lee, George R Riley, Wonhee Jang, Wendy S Rubinstein, Deanna M Church, Donna R Maglott. Nucleic Acids Res 2014
28

Medically actionable pathogenic variants in a population of 13,131 healthy elderly individuals.
Paul Lacaze, Robert Sebra, Moeen Riaz, Jane Tiller, Jerico Revote, James Phung, Emily J Parker, Suzanne G Orchard, Jessica E Lockery, Rory Wolfe,[...]. Genet Med 2020
9
28

Where genotype is not predictive of phenotype: towards an understanding of the molecular basis of reduced penetrance in human inherited disease.
David N Cooper, Michael Krawczak, Constantin Polychronakos, Chris Tyler-Smith, Hildegard Kehrer-Sawatzki. Hum Genet 2013
314
14

Distribution and clinical impact of functional variants in 50,726 whole-exome sequences from the DiscovEHR study.
Frederick E Dewey, Michael F Murray, John D Overton, Lukas Habegger, Joseph B Leader, Samantha N Fetterolf, Colm O'Dushlaine, Cristopher V Van Hout, Jeffrey Staples, Claudia Gonzaga-Jauregui,[...]. Science 2016
281
14

Analysis of 589,306 genomes identifies individuals resilient to severe Mendelian childhood diseases.
Rong Chen, Lisong Shi, Jörg Hakenberg, Brian Naughton, Pamela Sklar, Jianguo Zhang, Hanlin Zhou, Lifeng Tian, Om Prakash, Mathieu Lemire,[...]. Nat Biotechnol 2016
166
14

Aggregate penetrance of genomic variants for actionable disorders in European and African Americans.
Pradeep Natarajan, Nina B Gold, Alexander G Bick, Heather McLaughlin, Peter Kraft, Heidi L Rehm, Gina M Peloso, James G Wilson, Adolfo Correa, Jonathan G Seidman,[...]. Sci Transl Med 2016
38
14

Exploring the landscape of pathogenic genetic variation in the ExAC population database: insights of relevance to variant classification.
Wei Song, Sabrina A Gardner, Hayk Hovhannisyan, Amanda Natalizio, Katelyn S Weymouth, Wenjie Chen, Ildiko Thibodeau, Ekaterina Bogdanova, Stanley Letovsky, Alecia Willis,[...]. Genet Med 2016
61
14

Extreme cerebrospinal fluid amyloid beta levels identify family with late-onset Alzheimer's disease presenilin 1 mutation.
John S K Kauwe, Sarah Jacquart, Sumi Chakraverty, Jun Wang, Kevin Mayo, Anne M Fagan, David M Holtzman, John C Morris, Alison M Goate. Ann Neurol 2007
65
14

Rare variants in APP, PSEN1 and PSEN2 increase risk for AD in late-onset Alzheimer's disease families.
Carlos Cruchaga, Gabe Haller, Sumitra Chakraverty, Kevin Mayo, Francesco L M Vallania, Robi D Mitra, Kelley Faber, Jennifer Williamson, Tom Bird, Ramon Diaz-Arrastia,[...]. PLoS One 2012
180
14

Penetrance and the Healthy Elderly.
Paul Lacaze, Ingrid Winship, John McNeil. Genet Test Mol Biomarkers 2017
1
100

The Qatar genome: a population-specific tool for precision medicine in the Middle East.
Khalid A Fakhro, Michelle R Staudt, Monica Denise Ramstetter, Amal Robay, Joel A Malek, Ramin Badii, Ajayeb Al-Nabet Al-Marri, Charbel Abi Khalil, Alya Al-Shakaki, Omar Chidiac,[...]. Hum Genome Var 2016
54
14

Rare variant discovery by deep whole-genome sequencing of 1,070 Japanese individuals.
Masao Nagasaki, Jun Yasuda, Fumiki Katsuoka, Naoki Nariai, Kaname Kojima, Yosuke Kawai, Yumi Yamaguchi-Kabata, Junji Yokozawa, Inaho Danjoh, Sakae Saito,[...]. Nat Commun 2015
241
14

Ascertainment bias causes false signal of anticipation in genetic prion disease.
Eric Vallabh Minikel, Inga Zerr, Steven J Collins, Claudia Ponto, Alison Boyd, Genevieve Klug, André Karch, Joanna Kenny, John Collinge, Leonel T Takada,[...]. Am J Hum Genet 2014
26
14

Cohort Profile: Estonian Biobank of the Estonian Genome Center, University of Tartu.
Liis Leitsalu, Toomas Haller, Tõnu Esko, Mari-Liis Tammesoo, Helene Alavere, Harold Snieder, Markus Perola, Pauline C Ng, Reedik Mägi, Lili Milani,[...]. Int J Epidemiol 2015
131
14

Whole-Genome Sequencing of a Healthy Aging Cohort.
Galina A Erikson, Dale L Bodian, Manuel Rueda, Bhuvan Molparia, Erick R Scott, Ashley A Scott-Van Zeeland, Sarah E Topol, Nathan E Wineinger, John E Niederhuber, Eric J Topol,[...]. Cell 2016
107
14

Human genetic variation database, a reference database of genetic variations in the Japanese population.
Koichiro Higasa, Noriko Miyake, Jun Yoshimura, Kohji Okamura, Tetsuya Niihori, Hirotomo Saitsu, Koichiro Doi, Masakazu Shimizu, Kazuhiko Nakabayashi, Yoko Aoki,[...]. J Hum Genet 2016
185
14

Cohort profile: the 45 and up study.
Emily Banks, Sally Redman, Louisa Jorm, Bruce Armstrong, Adrian Bauman, John Beard, Valerie Beral, Julie Byles, Stephen Corbett, Robert Cumming,[...]. Int J Epidemiol 2008
472
14


Human genome sequencing using unchained base reads on self-assembling DNA nanoarrays.
Radoje Drmanac, Andrew B Sparks, Matthew J Callow, Aaron L Halpern, Norman L Burns, Bahram G Kermani, Paolo Carnevali, Igor Nazarenko, Geoffrey B Nilsen, George Yeung,[...]. Science 2010
760
14


Quantifying prion disease penetrance using large population control cohorts.
Eric Vallabh Minikel, Sonia M Vallabh, Monkol Lek, Karol Estrada, Kaitlin E Samocha, J Fah Sathirapongsasuti, Cory Y McLean, Joyce Y Tung, Linda P C Yu, Pierluigi Gambetti,[...]. Sci Transl Med 2016
181
14

From FastQ data to high confidence variant calls: the Genome Analysis Toolkit best practices pipeline.
Geraldine A Van der Auwera, Mauricio O Carneiro, Christopher Hartl, Ryan Poplin, Guillermo Del Angel, Ami Levy-Moonshine, Tadeusz Jordan, Khalid Shakir, David Roazen, Joel Thibault,[...]. Curr Protoc Bioinformatics 2013
14

SweGen: a whole-genome data resource of genetic variability in a cross-section of the Swedish population.
Adam Ameur, Johan Dahlberg, Pall Olason, Francesco Vezzi, Robert Karlsson, Marcel Martin, Johan Viklund, Andreas Kusalananda Kähäri, Pär Lundin, Huiwen Che,[...]. Eur J Hum Genet 2017
88
14

UK biobank: an open access resource for identifying the causes of a wide range of complex diseases of middle and old age.
Cathie Sudlow, John Gallacher, Naomi Allen, Valerie Beral, Paul Burton, John Danesh, Paul Downey, Paul Elliott, Jane Green, Martin Landray,[...]. PLoS Med 2015
14

A measure of primary sociobiological functions.
S Katz, C A Akpom. Int J Health Serv 1976
885
14

The impact of rare and low-frequency genetic variants in common disease.
Lorenzo Bomba, Klaudia Walter, Nicole Soranzo. Genome Biol 2017
137
14

Identification of Misclassified ClinVar Variants via Disease Population Prevalence.
Naisha Shah, Ying-Chen Claire Hou, Hung-Chun Yu, Rachana Sainger, C Thomas Caskey, J Craig Venter, Amalio Telenti. Am J Hum Genet 2018
57
14

The Modified Mini-Mental State (3MS) examination.
E L Teng, H C Chui. J Clin Psychiatry 1987
14

A map of human genome variation from population-scale sequencing.
Gonçalo R Abecasis, David Altshuler, Adam Auton, Lisa D Brooks, Richard M Durbin, Richard A Gibbs, Matt E Hurles, Gil A McVean. Nature 2010
14

Using high-resolution variant frequencies to empower clinical genome interpretation.
Nicola Whiffin, Eric Minikel, Roddy Walsh, Anne H O'Donnell-Luria, Konrad Karczewski, Alexander Y Ing, Paul J R Barton, Birgit Funke, Stuart A Cook, Daniel MacArthur,[...]. Genet Med 2017
179
14

Review of current methods, applications, and data management for the bioinformatics analysis of whole exome sequencing.
Riyue Bao, Lei Huang, Jorge Andrade, Wei Tan, Warren A Kibbe, Hongmei Jiang, Gang Feng. Cancer Inform 2014
83
14

The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function.
David Warde-Farley, Sylva L Donaldson, Ovi Comes, Khalid Zuberi, Rashad Badrawi, Pauline Chao, Max Franz, Chris Grouios, Farzana Kazi, Christian Tannus Lopes,[...]. Nucleic Acids Res 2010
14

Managing incidental findings in human subjects research: analysis and recommendations.
Susan M Wolf, Frances P Lawrenz, Charles A Nelson, Jeffrey P Kahn, Mildred K Cho, Ellen Wright Clayton, Joel G Fletcher, Michael K Georgieff, Dale Hammerschmidt, Kathy Hudson,[...]. J Law Med Ethics 2008
469
14

A Survey of Computational Tools to Analyze and Interpret Whole Exome Sequencing Data.
Jennifer D Hintzsche, William A Robinson, Aik Choon Tan. Int J Genomics 2016
19
14

ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks.
Gabriela Bindea, Bernhard Mlecnik, Hubert Hackl, Pornpimol Charoentong, Marie Tosolini, Amos Kirilovsky, Wolf-Herman Fridman, Franck Pagès, Zlatko Trajanoski, Jérôme Galon. Bioinformatics 2009
14


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.