A citation-based method for searching scientific literature

Joshua A Bagley, Daniel Reumann, Shan Bian, Julie Lévi-Strauss, Juergen A Knoblich. Nat Methods 2017
Times Cited: 237







List of co-cited articles
1283 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Cerebral organoids model human brain development and microcephaly.
Madeline A Lancaster, Magdalena Renner, Carol-Anne Martin, Daniel Wenzel, Louise S Bicknell, Matthew E Hurles, Tessa Homfray, Josef M Penninger, Andrew P Jackson, Juergen A Knoblich. Nature 2013
83

Assembly of functionally integrated human forebrain spheroids.
Fikri Birey, Jimena Andersen, Christopher D Makinson, Saiful Islam, Wu Wei, Nina Huber, H Christina Fan, Kimberly R Cordes Metzler, Georgia Panagiotakos, Nicholas Thom,[...]. Nature 2017
420
69

Fusion of Regionally Specified hPSC-Derived Organoids Models Human Brain Development and Interneuron Migration.
Yangfei Xiang, Yoshiaki Tanaka, Benjamin Patterson, Young-Jin Kang, Gubbi Govindaiah, Naomi Roselaar, Bilal Cakir, Kun-Yong Kim, Adam P Lombroso, Sung-Min Hwang,[...]. Cell Stem Cell 2017
220
67

Brain-Region-Specific Organoids Using Mini-bioreactors for Modeling ZIKV Exposure.
Xuyu Qian, Ha Nam Nguyen, Mingxi M Song, Christopher Hadiono, Sarah C Ogden, Christy Hammack, Bing Yao, Gregory R Hamersky, Fadi Jacob, Chun Zhong,[...]. Cell 2016
896
66

Cell diversity and network dynamics in photosensitive human brain organoids.
Giorgia Quadrato, Tuan Nguyen, Evan Z Macosko, John L Sherwood, Sung Min Yang, Daniel R Berger, Natalie Maria, Jorg Scholvin, Melissa Goldman, Justin P Kinney,[...]. Nature 2017
436
52

An in vivo model of functional and vascularized human brain organoids.
Abed AlFatah Mansour, J Tiago Gonçalves, Cooper W Bloyd, Hao Li, Sarah Fernandes, Daphne Quang, Stephen Johnston, Sarah L Parylak, Xin Jin, Fred H Gage. Nat Biotechnol 2018
333
52

Functional cortical neurons and astrocytes from human pluripotent stem cells in 3D culture.
Anca M Paşca, Steven A Sloan, Laura E Clarke, Yuan Tian, Christopher D Makinson, Nina Huber, Chul Hoon Kim, Jin-Young Park, Nancy A O'Rourke, Khoa D Nguyen,[...]. Nat Methods 2015
605
50

Self-organization of axial polarity, inside-out layer pattern, and species-specific progenitor dynamics in human ES cell-derived neocortex.
Taisuke Kadoshima, Hideya Sakaguchi, Tokushige Nakano, Mika Soen, Satoshi Ando, Mototsugu Eiraku, Yoshiki Sasai. Proc Natl Acad Sci U S A 2013
414
49

Midbrain-like Organoids from Human Pluripotent Stem Cells Contain Functional Dopaminergic and Neuromelanin-Producing Neurons.
Junghyun Jo, Yixin Xiao, Alfred Xuyang Sun, Engin Cukuroglu, Hoang-Dai Tran, Jonathan Göke, Zi Ying Tan, Tzuen Yih Saw, Cheng-Peow Tan, Hidayat Lokman,[...]. Cell Stem Cell 2016
305
46

Generation of cerebral organoids from human pluripotent stem cells.
Madeline A Lancaster, Juergen A Knoblich. Nat Protoc 2014
523
42

Self-organized formation of polarized cortical tissues from ESCs and its active manipulation by extrinsic signals.
Mototsugu Eiraku, Kiichi Watanabe, Mami Matsuo-Takasaki, Masako Kawada, Shigenobu Yonemura, Michiru Matsumura, Takafumi Wataya, Ayaka Nishiyama, Keiko Muguruma, Yoshiki Sasai. Cell Stem Cell 2008
748
42

Individual brain organoids reproducibly form cell diversity of the human cerebral cortex.
Silvia Velasco, Amanda J Kedaigle, Sean K Simmons, Allison Nash, Marina Rocha, Giorgia Quadrato, Bruna Paulsen, Lan Nguyen, Xian Adiconis, Aviv Regev,[...]. Nature 2019
232
42

hESC-Derived Thalamic Organoids Form Reciprocal Projections When Fused with Cortical Organoids.
Yangfei Xiang, Yoshiaki Tanaka, Bilal Cakir, Benjamin Patterson, Kun-Yong Kim, Pingnan Sun, Young-Jin Kang, Mei Zhong, Xinran Liu, Prabir Patra,[...]. Cell Stem Cell 2019
103
42

FOXG1-Dependent Dysregulation of GABA/Glutamate Neuron Differentiation in Autism Spectrum Disorders.
Jessica Mariani, Gianfilippo Coppola, Ping Zhang, Alexej Abyzov, Lauren Provini, Livia Tomasini, Mariangela Amenduni, Anna Szekely, Dean Palejev, Michael Wilson,[...]. Cell 2015
515
41

Guided self-organization and cortical plate formation in human brain organoids.
Madeline A Lancaster, Nina S Corsini, Simone Wolfinger, E Hilary Gustafson, Alex W Phillips, Thomas R Burkard, Tomoki Otani, Frederick J Livesey, Juergen A Knoblich. Nat Biotechnol 2017
264
40

Self-organization of polarized cerebellar tissue in 3D culture of human pluripotent stem cells.
Keiko Muguruma, Ayaka Nishiyama, Hideshi Kawakami, Kouichi Hashimoto, Yoshiki Sasai. Cell Rep 2015
254
40

Engineering of human brain organoids with a functional vascular-like system.
Bilal Cakir, Yangfei Xiang, Yoshiaki Tanaka, Mehmet H Kural, Maxime Parent, Young-Jin Kang, Kayley Chapeton, Benjamin Patterson, Yifan Yuan, Chang-Shun He,[...]. Nat Methods 2019
167
39

Human cerebral organoids recapitulate gene expression programs of fetal neocortex development.
J Gray Camp, Farhath Badsha, Marta Florio, Sabina Kanton, Tobias Gerber, Michaela Wilsch-Bräuninger, Eric Lewitus, Alex Sykes, Wulf Hevers, Madeline Lancaster,[...]. Proc Natl Acad Sci U S A 2015
424
37

Generation of functional hippocampal neurons from self-organizing human embryonic stem cell-derived dorsomedial telencephalic tissue.
Hideya Sakaguchi, Taisuke Kadoshima, Mika Soen, Nobuhiro Narii, Yoshihito Ishida, Masatoshi Ohgushi, Jun Takahashi, Mototsugu Eiraku, Yoshiki Sasai. Nat Commun 2015
187
36

Generation of human vascularized brain organoids.
Missy T Pham, Kari M Pollock, Melanie D Rose, Whitney A Cary, Heather R Stewart, Ping Zhou, Jan A Nolta, Ben Waldau. Neuroreport 2018
155
33

Cerebral organoids at the air-liquid interface generate diverse nerve tracts with functional output.
Stefano L Giandomenico, Susanna B Mierau, George M Gibbons, Lea M D Wenger, Laura Masullo, Timothy Sit, Magdalena Sutcliffe, Jerome Boulanger, Marco Tripodi, Emmanuel Derivery,[...]. Nat Neurosci 2019
132
31

Human iPSC-Derived Cerebral Organoids Model Cellular Features of Lissencephaly and Reveal Prolonged Mitosis of Outer Radial Glia.
Marina Bershteyn, Tomasz J Nowakowski, Alex A Pollen, Elizabeth Di Lullo, Aishwarya Nene, Anthony Wynshaw-Boris, Arnold R Kriegstein. Cell Stem Cell 2017
229
30

Human Astrocyte Maturation Captured in 3D Cerebral Cortical Spheroids Derived from Pluripotent Stem Cells.
Steven A Sloan, Spyros Darmanis, Nina Huber, Themasap A Khan, Fikri Birey, Christine Caneda, Richard Reimer, Stephen R Quake, Ben A Barres, Sergiu P Paşca. Neuron 2017
210
30

Reliability of human cortical organoid generation.
Se-Jin Yoon, Lubayna S Elahi, Anca M Pașca, Rebecca M Marton, Aaron Gordon, Omer Revah, Yuki Miura, Elisabeth M Walczak, Gwendolyn M Holdgate, H Christina Fan,[...]. Nat Methods 2019
123
30

Microglia innately develop within cerebral organoids.
Paul R Ormel, Renata Vieira de Sá, Emma J van Bodegraven, Henk Karst, Oliver Harschnitz, Marjolein A M Sneeboer, Lill Eva Johansen, Roland E van Dijk, Nicky Scheefhals, Amber Berdenis van Berlekom,[...]. Nat Commun 2018
174
30

The use of brain organoids to investigate neural development and disease.
Elizabeth Di Lullo, Arnold R Kriegstein. Nat Rev Neurosci 2017
235
28

Generation of human brain region-specific organoids using a miniaturized spinning bioreactor.
Xuyu Qian, Fadi Jacob, Mingxi Max Song, Ha Nam Nguyen, Hongjun Song, Guo-Li Ming. Nat Protoc 2018
132
28

Complex Oscillatory Waves Emerging from Cortical Organoids Model Early Human Brain Network Development.
Cleber A Trujillo, Richard Gao, Priscilla D Negraes, Jing Gu, Justin Buchanan, Sebastian Preissl, Allen Wang, Wei Wu, Gabriel G Haddad, Isaac A Chaim,[...]. Cell Stem Cell 2019
155
28

Highly efficient neural conversion of human ES and iPS cells by dual inhibition of SMAD signaling.
Stuart M Chambers, Christopher A Fasano, Eirini P Papapetrou, Mark Tomishima, Michel Sadelain, Lorenz Studer. Nat Biotechnol 2009
26

Induction of Expansion and Folding in Human Cerebral Organoids.
Yun Li, Julien Muffat, Attya Omer, Irene Bosch, Madeline A Lancaster, Mriganka Sur, Lee Gehrke, Juergen A Knoblich, Rudolf Jaenisch. Cell Stem Cell 2017
176
26


Zika virus impairs growth in human neurospheres and brain organoids.
Patricia P Garcez, Erick Correia Loiola, Rodrigo Madeiro da Costa, Luiza M Higa, Pablo Trindade, Rodrigo Delvecchio, Juliana Minardi Nascimento, Rodrigo Brindeiro, Amilcar Tanuri, Stevens K Rehen. Science 2016
655
25

Induction of pluripotent stem cells from adult human fibroblasts by defined factors.
Kazutoshi Takahashi, Koji Tanabe, Mari Ohnuki, Megumi Narita, Tomoko Ichisaka, Kiichiro Tomoda, Shinya Yamanaka. Cell 2007
25

Self-Organized Cerebral Organoids with Human-Specific Features Predict Effective Drugs to Combat Zika Virus Infection.
Momoko Watanabe, Jessie E Buth, Neda Vishlaghi, Luis de la Torre-Ubieta, Jiannis Taxidis, Baljit S Khakh, Giovanni Coppola, Caroline A Pearson, Ken Yamauchi, Danyang Gong,[...]. Cell Rep 2017
155
25

Differentiation and maturation of oligodendrocytes in human three-dimensional neural cultures.
Rebecca M Marton, Yuki Miura, Steven A Sloan, Qingyun Li, Omer Revah, Rebecca J Levy, John R Huguenard, Sergiu P Pașca. Nat Neurosci 2019
106
25

Specification of positional identity in forebrain organoids.
Gustav Y Cederquist, James J Asciolla, Jason Tchieu, Ryan M Walsh, Daniela Cornacchia, Marilyn D Resh, Lorenz Studer. Nat Biotechnol 2019
89
28

iPSC-Derived Human Microglia-like Cells to Study Neurological Diseases.
Edsel M Abud, Ricardo N Ramirez, Eric S Martinez, Luke M Healy, Cecilia H H Nguyen, Sean A Newman, Andriy V Yeromin, Vanessa M Scarfone, Samuel E Marsh, Cristhian Fimbres,[...]. Neuron 2017
327
24

Derivation of Human Midbrain-Specific Organoids from Neuroepithelial Stem Cells.
Anna S Monzel, Lisa M Smits, Kathrin Hemmer, Siham Hachi, Edinson Lucumi Moreno, Thea van Wuellen, Javier Jarazo, Jonas Walter, Inga Brüggemann, Ibrahim Boussaad,[...]. Stem Cell Reports 2017
151
24

Establishing Cerebral Organoids as Models of Human-Specific Brain Evolution.
Alex A Pollen, Aparna Bhaduri, Madeline G Andrews, Tomasz J Nowakowski, Olivia S Meyerson, Mohammed A Mostajo-Radji, Elizabeth Di Lullo, Beatriz Alvarado, Melanie Bedolli, Max L Dougherty,[...]. Cell 2019
142
24

Cerebral Organoids Recapitulate Epigenomic Signatures of the Human Fetal Brain.
Chongyuan Luo, Madeline A Lancaster, Rosa Castanon, Joseph R Nery, Juergen A Knoblich, Joseph R Ecker. Cell Rep 2016
136
23

Induction of myelinating oligodendrocytes in human cortical spheroids.
Mayur Madhavan, Zachary S Nevin, H Elizabeth Shick, Eric Garrison, Cheryl Clarkson-Paredes, Molly Karl, Benjamin L L Clayton, Daniel C Factor, Kevin C Allan, Lilianne Barbar,[...]. Nat Methods 2018
114
23

Modeling G2019S-LRRK2 Sporadic Parkinson's Disease in 3D Midbrain Organoids.
Hongwon Kim, Hyeok Ju Park, Hwan Choi, Yujung Chang, Hanseul Park, Jaein Shin, Junyeop Kim, Christopher J Lengner, Yong Kyu Lee, Jongpil Kim. Stem Cell Reports 2019
89
25

Cell stress in cortical organoids impairs molecular subtype specification.
Aparna Bhaduri, Madeline G Andrews, Walter Mancia Leon, Diane Jung, David Shin, Denise Allen, Dana Jung, Galina Schmunk, Maximilian Haeussler, Jahan Salma,[...]. Nature 2020
104
23

An Organoid-Based Model of Cortical Development Identifies Non-Cell-Autonomous Defects in Wnt Signaling Contributing to Miller-Dieker Syndrome.
Vira Iefremova, George Manikakis, Olivia Krefft, Ammar Jabali, Kevin Weynans, Ruven Wilkens, Fabio Marsoner, Björn Brändl, Franz-Josef Müller, Philipp Koch,[...]. Cell Rep 2017
118
22

Brain organoids: advances, applications and challenges.
Xuyu Qian, Hongjun Song, Guo-Li Ming. Development 2019
135
22

Self-Organizing 3D Human Neural Tissue Derived from Induced Pluripotent Stem Cells Recapitulate Alzheimer's Disease Phenotypes.
Waseem K Raja, Alison E Mungenast, Yuan-Ta Lin, Tak Ko, Fatema Abdurrob, Jinsoo Seo, Li-Huei Tsai. PLoS One 2016
202
21

Transcriptome and epigenome landscape of human cortical development modeled in organoids.
Anahita Amiri, Gianfilippo Coppola, Soraya Scuderi, Feinan Wu, Tanmoy Roychowdhury, Fuchen Liu, Sirisha Pochareddy, Yurae Shin, Alexias Safi, Lingyun Song,[...]. Science 2018
102
21


Modeling amyloid beta and tau pathology in human cerebral organoids.
Cesar Gonzalez, Enrique Armijo, Javiera Bravo-Alegria, Andrea Becerra-Calixto, Charles E Mays, Claudio Soto. Mol Psychiatry 2018
100
20

Self-organized developmental patterning and differentiation in cerebral organoids.
Magdalena Renner, Madeline A Lancaster, Shan Bian, Heejin Choi, Taeyun Ku, Angela Peer, Kwanghun Chung, Juergen A Knoblich. EMBO J 2017
148
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.