A citation-based method for searching scientific literature


List of co-cited articles
60 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The contribution of dormant origins to genome stability: from cell biology to human genetics.
Robert C Alver, Gaganmeet Singh Chadha, J Julian Blow. DNA Repair (Amst) 2014
67
55


Two E3 ubiquitin ligases, SCF-Skp2 and DDB1-Cul4, target human Cdt1 for proteolysis.
Hideo Nishitani, Nozomi Sugimoto, Vassilis Roukos, Yohsuke Nakanishi, Masafumi Saijo, Chikashi Obuse, Toshiki Tsurimoto, Keiichi I Nakayama, Keiko Nakayama, Masatoshi Fujita,[...]. EMBO J 2006
295
33

Cell-type-specific replication initiation programs set fragility of the FRA3B fragile site.
Anne Letessier, Gaël A Millot, Stéphane Koundrioukoff, Anne-Marie Lachagès, Nicolas Vogt, R Scott Hansen, Bernard Malfoy, Olivier Brison, Michelle Debatisse. Nature 2011
290
33

Phosphorylated SIRT1 associates with replication origins to prevent excess replication initiation and preserve genomic stability.
Koichi Utani, Haiqing Fu, Sang-Min Jang, Anna B Marks, Owen K Smith, Ya Zhang, Christophe E Redon, Noriaki Shimizu, Mirit I Aladjem. Nucleic Acids Res 2017
16
33

Replication timing is regulated by the number of MCMs loaded at origins.
Shankar P Das, Tyler Borrman, Victor W T Liu, Scott C-H Yang, John Bechhoefer, Nicholas Rhind. Genome Res 2015
48
33

Replication Fork Reversal: Players and Guardians.
Annabel Quinet, Delphine Lemaçon, Alessandro Vindigni. Mol Cell 2017
116
22

Transcription-replication conflicts: how they occur and how they are resolved.
Tatiana García-Muse, Andrés Aguilera. Nat Rev Mol Cell Biol 2016
170
22


Prevalent, Dynamic, and Conserved R-Loop Structures Associate with Specific Epigenomic Signatures in Mammals.
Lionel A Sanz, Stella R Hartono, Yoong Wearn Lim, Sandra Steyaert, Aparna Rajpurkar, Paul A Ginno, Xiaoqin Xu, Frédéric Chédin. Mol Cell 2016
230
22

The DNA damage response: making it safe to play with knives.
Alberto Ciccia, Stephen J Elledge. Mol Cell 2010
22


Replication fork stalling at natural impediments.
Ekaterina V Mirkin, Sergei M Mirkin. Microbiol Mol Biol Rev 2007
355
22


Oncogene-induced senescence is a DNA damage response triggered by DNA hyper-replication.
Raffaella Di Micco, Marzia Fumagalli, Angelo Cicalese, Sara Piccinin, Patrizia Gasparini, Chiara Luise, Catherine Schurra, Massimiliano Garre', Paolo Giovanni Nuciforo, Aaron Bensimon,[...]. Nature 2006
22


Causes and consequences of replication stress.
Michelle K Zeman, Karlene A Cimprich. Nat Cell Biol 2014
967
22

Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions.
Lars Guelen, Ludo Pagie, Emilie Brasset, Wouter Meuleman, Marius B Faza, Wendy Talhout, Bert H Eussen, Annelies de Klein, Lodewyk Wessels, Wouter de Laat,[...]. Nature 2008
22

Genome-wide analysis of the spatiotemporal regulation of firing and dormant replication origins in human cells.
Nozomi Sugimoto, Kazumitsu Maehara, Kazumasa Yoshida, Yasuyuki Ohkawa, Masatoshi Fujita. Nucleic Acids Res 2018
30
22

Replication stress induces 53BP1-containing OPT domains in G1 cells.
Jeanine A Harrigan, Rimma Belotserkovskaya, Julia Coates, Daniela S Dimitrova, Sophie E Polo, Charles R Bradshaw, Peter Fraser, Stephen P Jackson. J Cell Biol 2011
221
22


R-loop formation is a distinctive characteristic of unmethylated human CpG island promoters.
Paul A Ginno, Paul L Lott, Holly C Christensen, Ian Korf, Frédéric Chédin. Mol Cell 2012
432
22

Exploring and exploiting the systemic effects of deregulated replication licensing.
Theodoros G Petrakis, Eirini-Stavroula Komseli, Marilena Papaioannou, Kostas Vougas, Alexandros Polyzos, Vassilios Myrianthopoulos, Emmanuel Mikros, Ioannis P Trougakos, Dimitris Thanos, Dana Branzei,[...]. Semin Cancer Biol 2016
31
22

Transcription-coupled nucleotide excision repair factors promote R-loop-induced genome instability.
Julie Sollier, Caroline Townsend Stork, María L García-Rubio, Renee D Paulsen, Andrés Aguilera, Karlene A Cimprich. Mol Cell 2014
279
22

Transcription-Replication Conflict Orientation Modulates R-Loop Levels and Activates Distinct DNA Damage Responses.
Stephan Hamperl, Michael J Bocek, Joshua C Saldivar, Tomek Swigut, Karlene A Cimprich. Cell 2017
225
22

DNA replication stress as a hallmark of cancer.
Morgane Macheret, Thanos D Halazonetis. Annu Rev Pathol 2015
337
22

Comprehensive Mapping of Histone Modifications at DNA Double-Strand Breaks Deciphers Repair Pathway Chromatin Signatures.
Thomas Clouaire, Vincent Rocher, Anahita Lashgari, Coline Arnould, Marion Aguirrebengoa, Anna Biernacka, Magdalena Skrzypczak, François Aymard, Bernard Fongang, Norbert Dojer,[...]. Mol Cell 2018
94
22

Genome-wide mapping of long-range contacts unveils clustering of DNA double-strand breaks at damaged active genes.
François Aymard, Marion Aguirrebengoa, Emmanuelle Guillou, Biola M Javierre, Beatrix Bugler, Coline Arnould, Vincent Rocher, Jason S Iacovoni, Anna Biernacka, Magdalena Skrzypczak,[...]. Nat Struct Mol Biol 2017
124
22

53BP1 nuclear bodies form around DNA lesions generated by mitotic transmission of chromosomes under replication stress.
Claudia Lukas, Velibor Savic, Simon Bekker-Jensen, Carsten Doil, Beate Neumann, Ronni Sølvhøj Pedersen, Merete Grøfte, Kok Lung Chan, Ian David Hickson, Jiri Bartek,[...]. Nat Cell Biol 2011
450
22

Genome-wide depletion of replication initiation events in highly transcribed regions.
Melvenia M Martin, Michael Ryan, RyangGuk Kim, Anna L Zakas, Haiqing Fu, Chii Mei Lin, William C Reinhold, Sean R Davis, Sven Bilke, Hongfang Liu,[...]. Genome Res 2011
89
22


Pathways of mammalian replication fork restart.
Eva Petermann, Thomas Helleday. Nat Rev Mol Cell Biol 2010
265
22

Genome-wide dynamics of replication timing revealed by in vitro models of mouse embryogenesis.
Ichiro Hiratani, Tyrone Ryba, Mari Itoh, Joy Rathjen, Michael Kulik, Bernadett Papp, Eden Fussner, David P Bazett-Jones, Kathrin Plath, Stephen Dalton,[...]. Genome Res 2010
218
22

DNA replication origin activation in space and time.
Michalis Fragkos, Olivier Ganier, Philippe Coulombe, Marcel Méchali. Nat Rev Mol Cell Biol 2015
236
22

Dynamic changes in replication timing and gene expression during lineage specification of human pluripotent stem cells.
Juan Carlos Rivera-Mulia, Quinton Buckley, Takayo Sasaki, Jared Zimmerman, Ruth A Didier, Kristopher Nazor, Jeanne F Loring, Zheng Lian, Sherman Weissman, Allan J Robins,[...]. Genome Res 2015
78
22

Excess MCM proteins protect human cells from replicative stress by licensing backup origins of replication.
Arkaitz Ibarra, Etienne Schwob, Juan Méndez. Proc Natl Acad Sci U S A 2008
299
22

Global reorganization of replication domains during embryonic stem cell differentiation.
Ichiro Hiratani, Tyrone Ryba, Mari Itoh, Tomoki Yokochi, Michaela Schwaiger, Chia-Wei Chang, Yung Lyou, Tim M Townes, Dirk Schübeler, David M Gilbert. PLoS Biol 2008
373
22

The essential kinase ATR: ensuring faithful duplication of a challenging genome.
Joshua C Saldivar, David Cortez, Karlene A Cimprich. Nat Rev Mol Cell Biol 2017
302
22

Common fragile site profiling in epithelial and erythroid cells reveals that most recurrent cancer deletions lie in fragile sites hosting large genes.
Benoît Le Tallec, Gaël Armel Millot, Marion Esther Blin, Olivier Brison, Bernard Dutrillaux, Michelle Debatisse. Cell Rep 2013
123
22

Nucleotide deficiency promotes genomic instability in early stages of cancer development.
Assaf C Bester, Maayan Roniger, Yifat S Oren, Michael M Im, Dan Sarni, Malka Chaoat, Aaron Bensimon, Gideon Zamir, Donna S Shewach, Batsheva Kerem. Cell 2011
528
22


Large transcription units unify copy number variants and common fragile sites arising under replication stress.
Thomas E Wilson, Martin F Arlt, So Hae Park, Sountharia Rajendran, Michelle Paulsen, Mats Ljungman, Thomas W Glover. Genome Res 2015
102
22

Yeast heterochromatin regulators Sir2 and Sir3 act directly at euchromatic DNA replication origins.
Timothy A Hoggard, FuJung Chang, Kelsey Rae Perry, Sandya Subramanian, Jessica Kenworthy, Julie Chueng, Erika Shor, Edel M Hyland, Jef D Boeke, Michael Weinreich,[...]. PLoS Genet 2018
12
22

Rif1 controls DNA replication by directing Protein Phosphatase 1 to reverse Cdc7-mediated phosphorylation of the MCM complex.
Shin-Ichiro Hiraga, Gina M Alvino, Fujung Chang, Hui-Yong Lian, Akila Sridhar, Takashi Kubota, Bonita J Brewer, Michael Weinreich, M K Raghuraman, Anne D Donaldson. Genes Dev 2014
132
22

The histone deacetylases sir2 and rpd3 act on ribosomal DNA to control the replication program in budding yeast.
Kazumasa Yoshida, Julien Bacal, Damien Desmarais, Ismaël Padioleau, Olga Tsaponina, Andrei Chabes, Véronique Pantesco, Emeric Dubois, Hugues Parrinello, Magdalena Skrzypczak,[...]. Mol Cell 2014
61
22

Conserved nucleosome positioning defines replication origins.
Matthew L Eaton, Kyriaki Galani, Sukhyun Kang, Stephen P Bell, David M MacAlpine. Genes Dev 2010
245
22

DNA replication timing influences gene expression level.
Carolin A Müller, Conrad A Nieduszynski. J Cell Biol 2017
25
22

How dormant origins promote complete genome replication.
J Julian Blow, Xin Quan Ge, Dean A Jackson. Trends Biochem Sci 2011
146
22

Dormant origins, the licensing checkpoint, and the response to replicative stresses.
Debbie McIntosh, J Julian Blow. Cold Spring Harb Perspect Biol 2012
75
22

An ATR and CHK1 kinase signaling mechanism that limits origin firing during unperturbed DNA replication.
Tatiana N Moiseeva, Yandong Yin, Michael J Calderon, Chenao Qian, Sandra Schamus-Haynes, Norie Sugitani, Hatice U Osmanbeyoglu, Eli Rothenberg, Simon C Watkins, Christopher J Bakkenist. Proc Natl Acad Sci U S A 2019
45
22


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.