A citation-based method for searching scientific literature

M I Spronken, C E van de Sandt, E P de Jongh, O Vuong, S van der Vliet, T M Bestebroer, R C L Olsthoorn, G F Rimmelzwaan, R A M Fouchier, A P Gultyaev. RNA Biol 2017
Times Cited: 9







List of co-cited articles
76 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A functional sequence-specific interaction between influenza A virus genomic RNA segments.
Cyrille Gavazzi, Matthieu Yver, Catherine Isel, Redmond P Smyth, Manuel Rosa-Calatrava, Bruno Lina, Vincent Moulès, Roland Marquet. Proc Natl Acad Sci U S A 2013
86
77

Computational and molecular analysis of conserved influenza A virus RNA secondary structures involved in infectious virion production.
Yuki Kobayashi, Bernadeta Dadonaite, Neeltje van Doremalen, Yoshiyuki Suzuki, Wendy S Barclay, Oliver G Pybus. RNA Biol 2016
23
77

Genome-wide analysis of influenza viral RNA and nucleoprotein association.
Nara Lee, Valerie Le Sage, Adalena V Nanni, Dan J Snyder, Vaughn S Cooper, Seema S Lakdawala. Nucleic Acids Res 2017
44
66

An in vitro network of intermolecular interactions between viral RNA segments of an avian H5N2 influenza A virus: comparison with a human H3N2 virus.
Cyrille Gavazzi, Catherine Isel, Emilie Fournier, Vincent Moules, Annie Cavalier, Daniel Thomas, Bruno Lina, Roland Marquet. Nucleic Acids Res 2013
69
66

Nucleotide resolution mapping of influenza A virus nucleoprotein-RNA interactions reveals RNA features required for replication.
Graham D Williams, Dana Townsend, Kristine M Wylie, Preston J Kim, Gaya K Amarasinghe, Sebla B Kutluay, Adrianus C M Boon. Nat Commun 2018
41
66

Selective packaging of the influenza A genome and consequences for genetic reassortment.
Marie Gerber, Catherine Isel, Vincent Moules, Roland Marquet. Trends Microbiol 2014
91
66

Influenza NA and PB1 Gene Segments Interact during the Formation of Viral Progeny: Localization of the Binding Region within the PB1 Gene.
Brad Gilbertson, Tian Zheng, Marie Gerber, Anne Printz-Schweigert, Chi Ong, Roland Marquet, Catherine Isel, Steven Rockman, Lorena Brown. Viruses 2016
26
55

A supramolecular assembly formed by influenza A virus genomic RNA segments.
Emilie Fournier, Vincent Moules, Boris Essere, Jean-Christophe Paillart, Jean-Daniel Sirbat, Catherine Isel, Annie Cavalier, Jean-Paul Rolland, Daniel Thomas, Bruno Lina,[...]. Nucleic Acids Res 2012
122
55

RNA structural constraints in the evolution of the influenza A virus genome NP segment.
Alexander P Gultyaev, Anton Tsyganov-Bodounov, Monique I J Spronken, Sander van der Kooij, Ron A M Fouchier, René C L Olsthoorn. RNA Biol 2014
29
55

Influenza virus RNA structure: unique and common features.
Alexander P Gultyaev, Ron A M Fouchier, René C L Olsthoorn. Int Rev Immunol 2010
36
44

Nucleotide sequence requirements at the 5' end of the influenza A virus M RNA segment for efficient virus replication.
Makoto Ozawa, Junko Maeda, Kiyoko Iwatsuki-Horimoto, Shinji Watanabe, Hideo Goto, Taisuke Horimoto, Yoshihiro Kawaoka. J Virol 2009
55
44

Hierarchy among viral RNA (vRNA) segments in their role in vRNA incorporation into influenza A virions.
Yukiko Muramoto, Ayato Takada, Ken Fujii, Takeshi Noda, Kiyoko Iwatsuki-Horimoto, Shinji Watanabe, Taisuke Horimoto, Hiroshi Kida, Yoshihiro Kawaoka. J Virol 2006
124
44

Codon conservation in the influenza A virus genome defines RNA packaging signals.
Julia R Gog, Emmanuel Dos Santos Afonso, Rosa M Dalton, India Leclercq, Laurence Tiley, Debra Elton, Johann C von Kirchbach, Nadia Naffakh, Nicolas Escriou, Paul Digard. Nucleic Acids Res 2007
123
44

Critical role of segment-specific packaging signals in genetic reassortment of influenza A viruses.
Boris Essere, Matthieu Yver, Cyrille Gavazzi, Olivier Terrier, Catherine Isel, Emilie Fournier, Fabienne Giroux, Julien Textoris, Thomas Julien, Clio Socratous,[...]. Proc Natl Acad Sci U S A 2013
75
44


Packaging of the Influenza Virus Genome Is Governed by a Plastic Network of RNA- and Nucleoprotein-Mediated Interactions.
Hardin Bolte, Miruna E Rosu, Elena Hagelauer, Adolfo García-Sastre, Martin Schwemmle. J Virol 2019
19
44

The structure of the influenza A virus genome.
Bernadeta Dadonaite, Brad Gilbertson, Michael L Knight, Sanja Trifkovic, Steven Rockman, Alain Laederach, Lorena E Brown, Ervin Fodor, David L V Bauer. Nat Microbiol 2019
76
44

The influenza virus resource at the National Center for Biotechnology Information.
Yiming Bao, Pavel Bolotov, Dmitry Dernovoy, Boris Kiryutin, Leonid Zaslavsky, Tatiana Tatusova, Jim Ostell, David Lipman. J Virol 2008
689
33

The structure of native influenza virion ribonucleoproteins.
Rocío Arranz, Rocío Coloma, Francisco Javier Chichón, José Javier Conesa, José L Carrascosa, José M Valpuesta, Juan Ortín, Jaime Martín-Benito. Science 2012
197
33

Interaction network linking the human H3N2 influenza A virus genomic RNA segments.
Emilie Fournier, Vincent Moules, Boris Essere, Jean-Christophe Paillart, Jean-Daniel Sirbat, Annie Cavalier, Jean-Paul Rolland, Daniel Thomas, Bruno Lina, Catherine Isel,[...]. Vaccine 2012
56
33

Self-Folding of Naked Segment 8 Genomic RNA of Influenza A Virus.
Elzbieta Lenartowicz, Julita Kesy, Agnieszka Ruszkowska, Marta Soszynska-Jozwiak, Paula Michalak, Walter N Moss, Douglas H Turner, Ryszard Kierzek, Elzbieta Kierzek. PLoS One 2016
23
33

Structural insights into RNA synthesis by the influenza virus transcription-replication machine.
Alexander Pflug, Maria Lukarska, Patricia Resa-Infante, Stefan Reich, Stephen Cusack. Virus Res 2017
94
33

Secondary structure model of the naked segment 7 influenza A virus genomic RNA.
Agnieszka Ruszkowska, Elzbieta Lenartowicz, Walter N Moss, Ryszard Kierzek, Elzbieta Kierzek. Biochem J 2016
14
33

Influenza virus segment 5 (+)RNA - secondary structure and new targets for antiviral strategies.
Marta Soszynska-Jozwiak, Paula Michalak, Walter N Moss, Ryszard Kierzek, Julita Kesy, Elzbieta Kierzek. Sci Rep 2017
11
33

Three-dimensional analysis of ribonucleoprotein complexes in influenza A virus.
Takeshi Noda, Yukihiko Sugita, Kazuhiro Aoyama, Ai Hirase, Eiryo Kawakami, Atsuo Miyazawa, Hiroshi Sagara, Yoshihiro Kawaoka. Nat Commun 2012
112
33

Architecture of ribonucleoprotein complexes in influenza A virus particles.
Takeshi Noda, Hiroshi Sagara, Albert Yen, Ayato Takada, Hiroshi Kida, R Holland Cheng, Yoshihiro Kawaoka. Nature 2006
278
33

New insights into the nonconserved noncoding region of the subtype-determinant hemagglutinin and neuraminidase segments of influenza A viruses.
Lili Zhao, Yousong Peng, Kai Zhou, Mengmeng Cao, Jingfeng Wang, Xue Wang, Taijiao Jiang, Tao Deng. J Virol 2014
22
33


Mutational analysis of cis-acting RNA signals in segment 7 of influenza A virus.
Edward C Hutchinson, Martin D Curran, Eliot K Read, Julia R Gog, Paul Digard. J Virol 2008
110
33


Importance of the 1+7 configuration of ribonucleoprotein complexes for influenza A virus genome packaging.
Takeshi Noda, Shin Murakami, Sumiho Nakatsu, Hirotaka Imai, Yukiko Muramoto, Keiko Shindo, Hiroshi Sagara, Yoshihiro Kawaoka. Nat Commun 2018
30
33

Structural and Functional Motifs in Influenza Virus RNAs.
Damien Ferhadian, Maud Contrant, Anne Printz-Schweigert, Redmond P Smyth, Jean-Christophe Paillart, Roland Marquet. Front Microbiol 2018
35
33



Influenza virus PB1 and neuraminidase gene segments can cosegregate during vaccine reassortment driven by interactions in the PB1 coding region.
Joanna C A Cobbin, Chi Ong, Erin Verity, Brad P Gilbertson, Steven P Rockman, Lorena E Brown. J Virol 2014
28
33

Mutational analyses of packaging signals in influenza virus PA, PB1, and PB2 genomic RNA segments.
Yuhong Liang, Taoying Huang, Hinh Ly, Tristram G Parslow, Yuying Liang. J Virol 2008
68
33

The biology of influenza viruses.
Nicole M Bouvier, Peter Palese. Vaccine 2008
533
22

Structural features of an influenza virus promoter and their implications for viral RNA synthesis.
S H Bae, H K Cheong, J H Lee, C Cheong, M Kainosho, B S Choi. Proc Natl Acad Sci U S A 2001
69
22


Secondary structures for 5' regions of R2 retrotransposon RNAs reveal a novel conserved pseudoknot and regions that evolve under different constraints.
Elzbieta Kierzek, Shawn M Christensen, Thomas H Eickbush, Ryszard Kierzek, Douglas H Turner, Walter N Moss. J Mol Biol 2009
32
22



Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure.
David H Mathews, Matthew D Disney, Jessica L Childs, Susan J Schroeder, Michael Zuker, Douglas H Turner. Proc Natl Acad Sci U S A 2004
941
22




Influenza a virus assembly intermediates fuse in the cytoplasm.
Seema S Lakdawala, Yicong Wu, Peter Wawrzusin, Juraj Kabat, Andrew J Broadbent, Elaine W Lamirande, Ervin Fodor, Nihal Altan-Bonnet, Hari Shroff, Kanta Subbarao. PLoS Pathog 2014
91
22


Characterisation of influenza A viruses with mutations in segment 5 packaging signals.
Edward C Hutchinson, Helen M Wise, Katerine Kudryavtseva, Martin D Curran, Paul Digard. Vaccine 2009
44
22

One influenza virus particle packages eight unique viral RNAs as shown by FISH analysis.
Yi-ying Chou, Reza Vafabakhsh, Sultan Doğanay, Qinshan Gao, Taekjip Ha, Peter Palese. Proc Natl Acad Sci U S A 2012
115
22


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.