A citation-based method for searching scientific literature

Sara Ballouz, Jesse Gillis. Genome Med 2017
Times Cited: 8







List of co-cited articles
97 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Insights into Autism Spectrum Disorder Genomic Architecture and Biology from 71 Risk Loci.
Stephan J Sanders, Xin He, A Jeremy Willsey, A Gulhan Ercan-Sencicek, Kaitlin E Samocha, A Ercument Cicek, Michael T Murtha, Vanessa H Bal, Somer L Bishop, Shan Dong,[...]. Neuron 2015
755
75

De novo mutations in schizophrenia implicate synaptic networks.
Menachem Fromer, Andrew J Pocklington, David H Kavanagh, Hywel J Williams, Sarah Dwyer, Padhraig Gormley, Lyudmila Georgieva, Elliott Rees, Priit Palta, Douglas M Ruderfer,[...]. Nature 2014
62

Polygenic transmission disequilibrium confirms that common and rare variation act additively to create risk for autism spectrum disorders.
Daniel J Weiner, Emilie M Wigdor, Stephan Ripke, Raymond K Walters, Jack A Kosmicki, Jakob Grove, Kaitlin E Samocha, Jacqueline I Goldstein, Aysu Okbay, Jonas Bybjerg-Grauholm,[...]. Nat Genet 2017
241
62

Transcriptional signatures of schizophrenia in hiPSC-derived NPCs and neurons are concordant with post-mortem adult brains.
Gabriel E Hoffman, Brigham J Hartley, Erin Flaherty, Ian Ladran, Peter Gochman, Douglas M Ruderfer, Eli A Stahl, Judith Rapoport, Pamela Sklar, Kristen J Brennand. Nat Commun 2017
91
62

A polygenic burden of rare disruptive mutations in schizophrenia.
Shaun M Purcell, Jennifer L Moran, Menachem Fromer, Douglas Ruderfer, Nadia Solovieff, Panos Roussos, Colm O'Dushlaine, Kimberly Chambert, Sarah E Bergen, Anna Kähler,[...]. Nature 2014
965
62

Shared molecular neuropathology across major psychiatric disorders parallels polygenic overlap.
Michael J Gandal, Jillian R Haney, Neelroop N Parikshak, Virpi Leppa, Gokul Ramaswami, Chris Hartl, Andrew J Schork, Vivek Appadurai, Alfonso Buil, Thomas M Werge,[...]. Science 2018
529
50


Synaptic dysregulation in a human iPS cell model of mental disorders.
Zhexing Wen, Ha Nam Nguyen, Ziyuan Guo, Matthew A Lalli, Xinyuan Wang, Yijing Su, Nam-Shik Kim, Ki-Jun Yoon, Jaehoon Shin, Ce Zhang,[...]. Nature 2014
358
50

Contribution of copy number variants to schizophrenia from a genome-wide study of 41,321 subjects.
Christian R Marshall, Daniel P Howrigan, Daniele Merico, Bhooma Thiruvahindrapuram, Wenting Wu, Douglas S Greer, Danny Antaki, Aniket Shetty, Peter A Holmans, Dalila Pinto,[...]. Nat Genet 2017
526
50

Gene expression elucidates functional impact of polygenic risk for schizophrenia.
Menachem Fromer, Panos Roussos, Solveig K Sieberts, Jessica S Johnson, David H Kavanagh, Thanneer M Perumal, Douglas M Ruderfer, Edwin C Oh, Aaron Topol, Hardik R Shah,[...]. Nat Neurosci 2016
576
50

An Expanded View of Complex Traits: From Polygenic to Omnigenic.
Evan A Boyle, Yang I Li, Jonathan K Pritchard. Cell 2017
50


Phenotypic differences in hiPSC NPCs derived from patients with schizophrenia.
K Brennand, J N Savas, Y Kim, N Tran, A Simone, K Hashimoto-Torii, K G Beaumont, H J Kim, A Topol, I Ladran,[...]. Mol Psychiatry 2015
284
50

Common alleles contribute to schizophrenia in CNV carriers.
K E Tansey, E Rees, D E Linden, S Ripke, K D Chambert, J L Moran, S A McCarroll, P Holmans, G Kirov, J Walters,[...]. Mol Psychiatry 2016
23
50

Human Neuropsychiatric Disease Modeling using Conditional Deletion Reveals Synaptic Transmission Defects Caused by Heterozygous Mutations in NRXN1.
ChangHui Pak, Tamas Danko, Yingsha Zhang, Jason Aoto, Garret Anderson, Stephan Maxeiner, Fei Yi, Marius Wernig, Thomas C Südhof. Cell Stem Cell 2015
137
50

Open Chromatin Profiling in hiPSC-Derived Neurons Prioritizes Functional Noncoding Psychiatric Risk Variants and Highlights Neurodevelopmental Loci.
Marc P Forrest, Hanwen Zhang, Winton Moy, Heather McGowan, Catherine Leites, Leonardo E Dionisio, Zihui Xu, Jianxin Shi, Alan R Sanders, William J Greenleaf,[...]. Cell Stem Cell 2017
79
50

Genetic identification of brain cell types underlying schizophrenia.
Nathan G Skene, Julien Bryois, Trygve E Bakken, Gerome Breen, James J Crowley, Héléna A Gaspar, Paola Giusti-Rodriguez, Rebecca D Hodge, Jeremy A Miller, Ana B Muñoz-Manchado,[...]. Nat Genet 2018
264
50

Evaluating Synthetic Activation and Repression of Neuropsychiatric-Related Genes in hiPSC-Derived NPCs, Neurons, and Astrocytes.
Seok-Man Ho, Brigham J Hartley, Erin Flaherty, Prashanth Rajarajan, Rawan Abdelaal, Ifeanyi Obiorah, Natalie Barretto, Hamza Muhammad, Hemali P Phatnani, Schahram Akbarian,[...]. Stem Cell Reports 2017
41
50

Common schizophrenia alleles are enriched in mutation-intolerant genes and in regions under strong background selection.
Antonio F Pardiñas, Peter Holmans, Andrew J Pocklington, Valentina Escott-Price, Stephan Ripke, Noa Carrera, Sophie E Legge, Sophie Bishop, Darren Cameron, Marian L Hamshere,[...]. Nat Genet 2018
765
50

A model for neural development and treatment of Rett syndrome using human induced pluripotent stem cells.
Maria C N Marchetto, Cassiano Carromeu, Allan Acab, Diana Yu, Gene W Yeo, Yangling Mu, Gong Chen, Fred H Gage, Alysson R Muotri. Cell 2010
922
37


Molecular and functional variation in iPSC-derived sensory neurons.
Jeremy Schwartzentruber, Stefanie Foskolou, Helena Kilpinen, Julia Rodrigues, Kaur Alasoo, Andrew J Knights, Minal Patel, Angela Goncalves, Rita Ferreira, Caroline Louise Benn,[...]. Nat Genet 2018
116
37

Synaptic, transcriptional and chromatin genes disrupted in autism.
Silvia De Rubeis, Xin He, Arthur P Goldberg, Christopher S Poultney, Kaitlin Samocha, A Erucment Cicek, Yan Kou, Li Liu, Menachem Fromer, Susan Walker,[...]. Nature 2014
37

Dysregulation of miRNA-9 in a Subset of Schizophrenia Patient-Derived Neural Progenitor Cells.
Aaron Topol, Shijia Zhu, Brigham J Hartley, Jane English, Mads E Hauberg, Ngoc Tran, Chelsea Ann Rittenhouse, Anthony Simone, Douglas M Ruderfer, Jessica Johnson,[...]. Cell Rep 2016
80
37

MicroRNA Profiling of Neurons Generated Using Induced Pluripotent Stem Cells Derived from Patients with Schizophrenia and Schizoaffective Disorder, and 22q11.2 Del.
Dejian Zhao, Mingyan Lin, Jian Chen, Erika Pedrosa, Anastasia Hrabovsky, H Matthew Fourcade, Deyou Zheng, Herbert M Lachman. PLoS One 2015
74
37

Human iPSC Glial Mouse Chimeras Reveal Glial Contributions to Schizophrenia.
Martha S Windrem, Mikhail Osipovitch, Zhengshan Liu, Janna Bates, Devin Chandler-Militello, Lisa Zou, Jared Munir, Steven Schanz, Katherine McCoy, Robert H Miller,[...]. Cell Stem Cell 2017
148
37

Modelling schizophrenia using human induced pluripotent stem cells.
Kristen J Brennand, Anthony Simone, Jessica Jou, Chelsea Gelboin-Burkhart, Ngoc Tran, Sarah Sangar, Yan Li, Yangling Mu, Gong Chen, Diana Yu,[...]. Nature 2011
935
37

Modeling human cortical development in vitro using induced pluripotent stem cells.
Jessica Mariani, Maria Vittoria Simonini, Dean Palejev, Livia Tomasini, Gianfilippo Coppola, Anna M Szekely, Tamas L Horvath, Flora M Vaccarino. Proc Natl Acad Sci U S A 2012
336
37


Modeling hippocampal neurogenesis using human pluripotent stem cells.
Diana Xuan Yu, Francesco Paolo Di Giorgio, Jun Yao, Maria Carolina Marchetto, Kristen Brennand, Rebecca Wright, Arianna Mei, Lauren McHenry, David Lisuk, Jaeson Michael Grasmick,[...]. Stem Cell Reports 2014
192
37

Sequencing chromosomal abnormalities reveals neurodevelopmental loci that confer risk across diagnostic boundaries.
Michael E Talkowski, Jill A Rosenfeld, Ian Blumenthal, Vamsee Pillalamarri, Colby Chiang, Adrian Heilbut, Carl Ernst, Carrie Hanscom, Elizabeth Rossin, Amelia M Lindgren,[...]. Cell 2012
411
37

Identification of common genetic risk variants for autism spectrum disorder.
Jakob Grove, Stephan Ripke, Thomas D Als, Manuel Mattheisen, Raymond K Walters, Hyejung Won, Jonatan Pallesen, Esben Agerbo, Ole A Andreassen, Richard Anney,[...]. Nat Genet 2019
780
37

MAGMA: generalized gene-set analysis of GWAS data.
Christiaan A de Leeuw, Joris M Mooij, Tom Heskes, Danielle Posthuma. PLoS Comput Biol 2015
37

Multiplexed detection of proteins, transcriptomes, clonotypes and CRISPR perturbations in single cells.
Eleni P Mimitou, Anthony Cheng, Antonino Montalbano, Stephanie Hao, Marlon Stoeckius, Mateusz Legut, Timothy Roush, Alberto Herrera, Efthymia Papalexi, Zhengqing Ouyang,[...]. Nat Methods 2019
183
37

Perturb-Seq: Dissecting Molecular Circuits with Scalable Single-Cell RNA Profiling of Pooled Genetic Screens.
Atray Dixit, Oren Parnas, Biyu Li, Jenny Chen, Charles P Fulco, Livnat Jerby-Arnon, Nemanja D Marjanovic, Danielle Dionne, Tyler Burks, Raktima Raychowdhury,[...]. Cell 2016
606
37

Common Disease Is More Complex Than Implied by the Core Gene Omnigenic Model.
Naomi R Wray, Cisca Wijmenga, Patrick F Sullivan, Jian Yang, Peter M Visscher. Cell 2018
129
37

Assembly of functionally integrated human forebrain spheroids.
Fikri Birey, Jimena Andersen, Christopher D Makinson, Saiful Islam, Wu Wei, Nina Huber, H Christina Fan, Kimberly R Cordes Metzler, Georgia Panagiotakos, Nicholas Thom,[...]. Nature 2017
596
37

Functional cortical neurons and astrocytes from human pluripotent stem cells in 3D culture.
Anca M Paşca, Steven A Sloan, Laura E Clarke, Yuan Tian, Christopher D Makinson, Nina Huber, Chul Hoon Kim, Jin-Young Park, Nancy A O'Rourke, Khoa D Nguyen,[...]. Nat Methods 2015
796
37

Rapid Ngn2-induction of excitatory neurons from hiPSC-derived neural progenitor cells.
Seok-Man Ho, Brigham J Hartley, Julia Tcw, Michael Beaumont, Khalifa Stafford, Paul A Slesinger, Kristen J Brennand. Methods 2016
70
37

Spatial and temporal mapping of de novo mutations in schizophrenia to a fetal prefrontal cortical network.
Suleyman Gulsuner, Tom Walsh, Amanda C Watts, Ming K Lee, Anne M Thornton, Silvia Casadei, Caitlin Rippey, Hashem Shahin, Vishwajit L Nimgaonkar, Rodney C P Go,[...]. Cell 2013
372
25

Functional maturation of hPSC-derived forebrain interneurons requires an extended timeline and mimics human neural development.
Cory R Nicholas, Jiadong Chen, Yunshuo Tang, Derek G Southwell, Nadine Chalmers, Daniel Vogt, Christine M Arnold, Ying-Jiun J Chen, Edouard G Stanley, Andrew G Elefanty,[...]. Cell Stem Cell 2013
372
25

Human iPSC neurons display activity-dependent neurotransmitter secretion: aberrant catecholamine levels in schizophrenia neurons.
Vivian Hook, Kristen J Brennand, Yongsung Kim, Thomas Toneff, Lydiane Funkelstein, Kelly C Lee, Michael Ziegler, Fred H Gage. Stem Cell Reports 2014
80
25


Increased burden of ultra-rare protein-altering variants among 4,877 individuals with schizophrenia.
Giulio Genovese, Menachem Fromer, Eli A Stahl, Douglas M Ruderfer, Kimberly Chambert, Mikael Landén, Jennifer L Moran, Shaun M Purcell, Pamela Sklar, Patrick F Sullivan,[...]. Nat Neurosci 2016
276
25

Differential responses to lithium in hyperexcitable neurons from patients with bipolar disorder.
Jerome Mertens, Qiu-Wen Wang, Yongsung Kim, Diana X Yu, Son Pham, Bo Yang, Yi Zheng, Kenneth E Diffenderfer, Jian Zhang, Sheila Soltani,[...]. Nature 2015
317
25

The road to precision psychiatry: translating genetics into disease mechanisms.
Michael J Gandal, Virpi Leppa, Hyejung Won, Neelroop N Parikshak, Daniel H Geschwind. Nat Neurosci 2016
125
25

Genomic DISC1 Disruption in hiPSCs Alters Wnt Signaling and Neural Cell Fate.
Priya Srikanth, Karam Han, Dana G Callahan, Eugenia Makovkina, Christina R Muratore, Matthew A Lalli, Honglin Zhou, Justin D Boyd, Kenneth S Kosik, Dennis J Selkoe,[...]. Cell Rep 2015
82
25

Functional implications of a psychiatric risk variant within CACNA1C in induced human neurons.
T Yoshimizu, J Q Pan, A E Mungenast, J M Madison, S Su, J Ketterman, D Ongur, D McPhie, B Cohen, R Perlis,[...]. Mol Psychiatry 2015
98
25

Analysis of Transcriptional Variability in a Large Human iPSC Library Reveals Genetic and Non-genetic Determinants of Heterogeneity.
Ivan Carcamo-Orive, Gabriel E Hoffman, Paige Cundiff, Noam D Beckmann, Sunita L D'Souza, Joshua W Knowles, Achchhe Patel, Dimitri Papatsenko, Fahim Abbasi, Gerald M Reaven,[...]. Cell Stem Cell 2017
153
25

Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types.
Hilary K Finucane, Yakir A Reshef, Verneri Anttila, Kamil Slowikowski, Alexander Gusev, Andrea Byrnes, Steven Gazal, Po-Ru Loh, Caleb Lareau, Noam Shoresh,[...]. Nat Genet 2018
373
25


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.