A citation-based method for searching scientific literature

Monika Piwecka, Petar Glažar, Luis R Hernandez-Miranda, Sebastian Memczak, Susanne A Wolf, Agnieszka Rybak-Wolf, Andrei Filipchyk, Filippos Klironomos, Cledi Alicia Cerda Jara, Pascal Fenske, Thorsten Trimbuch, Vera Zywitza, Mireya Plass, Luisa Schreyer, Salah Ayoub, Christine Kocks, Ralf Kühn, Christian Rosenmund, Carmen Birchmeier, Nikolaus Rajewsky. Science 2017
Times Cited: 657







List of co-cited articles
865 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Natural RNA circles function as efficient microRNA sponges.
Thomas B Hansen, Trine I Jensen, Bettina H Clausen, Jesper B Bramsen, Bente Finsen, Christian K Damgaard, Jørgen Kjems. Nature 2013
59

Circular RNAs are a large class of animal RNAs with regulatory potency.
Sebastian Memczak, Marvin Jens, Antigoni Elefsinioti, Francesca Torti, Janna Krueger, Agnieszka Rybak, Luisa Maier, Sebastian D Mackowiak, Lea H Gregersen, Mathias Munschauer,[...]. Nature 2013
58

circRNA biogenesis competes with pre-mRNA splicing.
Reut Ashwal-Fluss, Markus Meyer, Nagarjuna Reddy Pamudurti, Andranik Ivanov, Osnat Bartok, Mor Hanan, Naveh Evantal, Sebastian Memczak, Nikolaus Rajewsky, Sebastian Kadener. Mol Cell 2014
44

Circular RNAs are abundant, conserved, and associated with ALU repeats.
William R Jeck, Jessica A Sorrentino, Kai Wang, Michael K Slevin, Christin E Burd, Jinze Liu, William F Marzluff, Norman E Sharpless. RNA 2013
38

Exon-intron circular RNAs regulate transcription in the nucleus.
Zhaoyong Li, Chuan Huang, Chun Bao, Liang Chen, Mei Lin, Xiaolin Wang, Guolin Zhong, Bin Yu, Wanchen Hu, Limin Dai,[...]. Nat Struct Mol Biol 2015
37

The RNA binding protein quaking regulates formation of circRNAs.
Simon J Conn, Katherine A Pillman, John Toubia, Vanessa M Conn, Marika Salmanidis, Caroline A Phillips, Suraya Roslan, Andreas W Schreiber, Philip A Gregory, Gregory J Goodall. Cell 2015
34

Circular RNAs in the Mammalian Brain Are Highly Abundant, Conserved, and Dynamically Expressed.
Agnieszka Rybak-Wolf, Christin Stottmeister, Petar Glažar, Marvin Jens, Natalia Pino, Sebastian Giusti, Mor Hanan, Mikaela Behm, Osnat Bartok, Reut Ashwal-Fluss,[...]. Mol Cell 2015
29

Circular intronic long noncoding RNAs.
Yang Zhang, Xiao-Ou Zhang, Tian Chen, Jian-Feng Xiang, Qing-Fei Yin, Yu-Hang Xing, Shanshan Zhu, Li Yang, Ling-Ling Chen. Mol Cell 2013
28

Circ-ZNF609 Is a Circular RNA that Can Be Translated and Functions in Myogenesis.
Ivano Legnini, Gaia Di Timoteo, Francesca Rossi, Mariangela Morlando, Francesca Briganti, Olga Sthandier, Alessandro Fatica, Tiziana Santini, Adrian Andronache, Mark Wade,[...]. Mol Cell 2017
27

Complementary sequence-mediated exon circularization.
Xiao-Ou Zhang, Hai-Bin Wang, Yang Zhang, Xuhua Lu, Ling-Ling Chen, Li Yang. Cell 2014
27

Viroids are single-stranded covalently closed circular RNA molecules existing as highly base-paired rod-like structures.
H L Sanger, G Klotz, D Riesner, H J Gross, A K Kleinschmidt. Proc Natl Acad Sci U S A 1976
26

The biogenesis, biology and characterization of circular RNAs.
Lasse S Kristensen, Maria S Andersen, Lotte V W Stagsted, Karoline K Ebbesen, Thomas B Hansen, Jørgen Kjems. Nat Rev Genet 2019
26

Extensive translation of circular RNAs driven by N6-methyladenosine.
Yun Yang, Xiaojuan Fan, Miaowei Mao, Xiaowei Song, Ping Wu, Yang Zhang, Yongfeng Jin, Yi Yang, Ling-Ling Chen, Yang Wang,[...]. Cell Res 2017
932
26

The Landscape of Circular RNA in Cancer.
Josh N Vo, Marcin Cieslik, Yajia Zhang, Sudhanshu Shukla, Lanbo Xiao, Yuping Zhang, Yi-Mi Wu, Saravana M Dhanasekaran, Carl G Engelke, Xuhong Cao,[...]. Cell 2019
731
26

Structure and Degradation of Circular RNAs Regulate PKR Activation in Innate Immunity.
Chu-Xiao Liu, Xiang Li, Fang Nan, Shan Jiang, Xiang Gao, Si-Kun Guo, Wei Xue, Yange Cui, Kaige Dong, Huihua Ding,[...]. Cell 2019
327
26

Circular RNAs are the predominant transcript isoform from hundreds of human genes in diverse cell types.
Julia Salzman, Charles Gawad, Peter Lincoln Wang, Norman Lacayo, Patrick O Brown. PLoS One 2012
25

Foxo3 circular RNA retards cell cycle progression via forming ternary complexes with p21 and CDK2.
William W Du, Weining Yang, Elizabeth Liu, Zhenguo Yang, Preet Dhaliwal, Burton B Yang. Nucleic Acids Res 2016
987
24

Expanded identification and characterization of mammalian circular RNAs.
Junjie U Guo, Vikram Agarwal, Huili Guo, David P Bartel. Genome Biol 2014
24

Circular RNA profiling reveals an abundant circHIPK3 that regulates cell growth by sponging multiple miRNAs.
Qiupeng Zheng, Chunyang Bao, Weijie Guo, Shuyi Li, Jie Chen, Bing Chen, Yanting Luo, Dongbin Lyu, Yan Li, Guohai Shi,[...]. Nat Commun 2016
23

The Biogenesis, Functions, and Challenges of Circular RNAs.
Xiang Li, Li Yang, Ling-Ling Chen. Mol Cell 2018
974
21

Translation of CircRNAs.
Nagarjuna Reddy Pamudurti, Osnat Bartok, Marvin Jens, Reut Ashwal-Fluss, Christin Stottmeister, Larissa Ruhe, Mor Hanan, Emanuel Wyler, Daniel Perez-Hernandez, Evelyn Ramberger,[...]. Mol Cell 2017
971
21

Detecting and characterizing circular RNAs.
William R Jeck, Norman E Sharpless. Nat Biotechnol 2014
20

The Biogenesis of Nascent Circular RNAs.
Yang Zhang, Wei Xue, Xiang Li, Jun Zhang, Siye Chen, Jia-Lin Zhang, Li Yang, Ling-Ling Chen. Cell Rep 2016
320
19

Neural circular RNAs are derived from synaptic genes and regulated by development and plasticity.
Xintian You, Irena Vlatkovic, Ana Babic, Tristan Will, Irina Epstein, Georgi Tushev, Güney Akbalik, Mantian Wang, Caspar Glock, Claudia Quedenau,[...]. Nat Neurosci 2015
692
19

Circular RNA is enriched and stable in exosomes: a promising biomarker for cancer diagnosis.
Yan Li, Qiupeng Zheng, Chunyang Bao, Shuyi Li, Weijie Guo, Jiang Zhao, Di Chen, Jianren Gu, Xianghuo He, Shenglin Huang. Cell Res 2015
19

Genome-wide analysis of drosophila circular RNAs reveals their structural and sequence properties and age-dependent neural accumulation.
Jakub O Westholm, Pedro Miura, Sara Olson, Sol Shenker, Brian Joseph, Piero Sanfilippo, Susan E Celniker, Brenton R Graveley, Eric C Lai. Cell Rep 2014
594
18

Cell-type specific features of circular RNA expression.
Julia Salzman, Raymond E Chen, Mari N Olsen, Peter L Wang, Patrick O Brown. PLoS Genet 2013
17

Coordinated circRNA Biogenesis and Function with NF90/NF110 in Viral Infection.
Xiang Li, Chu-Xiao Liu, Wei Xue, Yang Zhang, Shan Jiang, Qing-Fei Yin, Jia Wei, Run-Wen Yao, Li Yang, Ling-Ling Chen. Mol Cell 2017
339
17

Identification of HuR target circular RNAs uncovers suppression of PABPN1 translation by CircPABPN1.
Kotb Abdelmohsen, Amaresh C Panda, Rachel Munk, Ioannis Grammatikakis, Dawood B Dudekula, Supriyo De, Jiyoung Kim, Ji Heon Noh, Kyoung Mi Kim, Jennifer L Martindale,[...]. RNA Biol 2017
457
17

The biogenesis and emerging roles of circular RNAs.
Ling-Ling Chen. Nat Rev Mol Cell Biol 2016
17

Short intronic repeat sequences facilitate circular RNA production.
Dongming Liang, Jeremy E Wilusz. Genes Dev 2014
571
16

circBase: a database for circular RNAs.
Petar Glažar, Panagiotis Papavasileiou, Nikolaus Rajewsky. RNA 2014
965
16

miRNA-dependent gene silencing involving Ago2-mediated cleavage of a circular antisense RNA.
Thomas B Hansen, Erik D Wiklund, Jesper B Bramsen, Sune B Villadsen, Aaron L Statham, Susan J Clark, Jørgen Kjems. EMBO J 2011
640
15

Diverse alternative back-splicing and alternative splicing landscape of circular RNAs.
Xiao-Ou Zhang, Rui Dong, Yang Zhang, Jia-Lin Zhang, Zheng Luo, Jun Zhang, Ling-Ling Chen, Li Yang. Genome Res 2016
484
15

Analysis of intron sequences reveals hallmarks of circular RNA biogenesis in animals.
Andranik Ivanov, Sebastian Memczak, Emanuel Wyler, Francesca Torti, Hagit T Porath, Marta R Orejuela, Michael Piechotta, Erez Y Levanon, Markus Landthaler, Christoph Dieterich,[...]. Cell Rep 2015
636
15

A length-dependent evolutionarily conserved pathway controls nuclear export of circular RNAs.
Chuan Huang, Dongming Liang, Deirdre C Tatomer, Jeremy E Wilusz. Genes Dev 2018
161
15

Induction of tumor apoptosis through a circular RNA enhancing Foxo3 activity.
William W Du, Ling Fang, Weining Yang, Nan Wu, Faryal Mehwish Awan, Zhenguo Yang, Burton B Yang. Cell Death Differ 2017
380
15


A Network of Noncoding Regulatory RNAs Acts in the Mammalian Brain.
Benjamin Kleaveland, Charlie Y Shi, Joanna Stefano, David P Bartel. Cell 2018
315
13

A ceRNA hypothesis: the Rosetta Stone of a hidden RNA language?
Leonardo Salmena, Laura Poliseno, Yvonne Tay, Lev Kats, Pier Paolo Pandolfi. Cell 2011
13

Exon circularization requires canonical splice signals.
Stefan Starke, Isabelle Jost, Oliver Rossbach, Tim Schneider, Silke Schreiner, Lee-Hsueh Hung, Albrecht Bindereif. Cell Rep 2015
478
12


Identification and Characterization of Circular RNAs As a New Class of Putative Biomarkers in Human Blood.
Sebastian Memczak, Panagiotis Papavasileiou, Oliver Peters, Nikolaus Rajewsky. PLoS One 2015
424
12

Circular RNAs are long-lived and display only minimal early alterations in response to a growth factor.
Yehoshua Enuka, Mattia Lauriola, Morris E Feldman, Aldema Sas-Chen, Igor Ulitsky, Yosef Yarden. Nucleic Acids Res 2016
292
12

DHX9 suppresses RNA processing defects originating from the Alu invasion of the human genome.
Tuğçe Aktaş, İbrahim Avşar Ilık, Daniel Maticzka, Vivek Bhardwaj, Cecilia Pessoa Rodrigues, Gerhard Mittler, Thomas Manke, Rolf Backofen, Asifa Akhtar. Nature 2017
271
12

A peptide encoded by circular form of LINC-PINT suppresses oncogenic transcriptional elongation in glioblastoma.
Maolei Zhang, Kun Zhao, Xiaoping Xu, Yibing Yang, Sheng Yan, Ping Wei, Hui Liu, Jianbo Xu, Feizhe Xiao, Huangkai Zhou,[...]. Nat Commun 2018
344
12

CircRNA accumulation in the aging mouse brain.
Hannah Gruner, Mariela Cortés-López, Daphne A Cooper, Matthew Bauer, Pedro Miura. Sci Rep 2016
204
12

CircACC1 Regulates Assembly and Activation of AMPK Complex under Metabolic Stress.
Qidong Li, Yichun Wang, Shuang Wu, Zhong Zhou, Xiaojuan Ding, Ronghua Shi, Rick F Thorne, Xu Dong Zhang, Wanglai Hu, Mian Wu. Cell Metab 2019
131
11

Foxo3 circular RNA promotes cardiac senescence by modulating multiple factors associated with stress and senescence responses.
William W Du, Weining Yang, Yu Chen, Zhong-Kai Wu, Francis Stuart Foster, Zhenguo Yang, Xiangmin Li, Burton B Yang. Eur Heart J 2017
449
11

Circular non-coding RNA ANRIL modulates ribosomal RNA maturation and atherosclerosis in humans.
Lesca M Holdt, Anika Stahringer, Kristina Sass, Garwin Pichler, Nils A Kulak, Wolfgang Wilfert, Alexander Kohlmaier, Andreas Herbst, Bernd H Northoff, Alexandros Nicolaou,[...]. Nat Commun 2016
647
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.