A citation-based method for searching scientific literature

Alan M Rice, Aoife McLysaght. BMC Biol 2017
Times Cited: 33







List of co-cited articles
68 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Gene balance hypothesis: connecting issues of dosage sensitivity across biological disciplines.
James A Birchler, Reiner A Veitia. Proc Natl Acad Sci U S A 2012
283
18


Mechanisms of haploinsufficiency revealed by genome-wide profiling in yeast.
Adam M Deutschbauer, Daniel F Jaramillo, Michael Proctor, Jochen Kumm, Maureen E Hillenmeyer, Ronald W Davis, Corey Nislow, Guri Giaever. Genetics 2005
360
9

Dosage sensitivity and the evolution of gene families in yeast.
Balázs Papp, Csaba Pál, Laurence D Hurst. Nature 2003
565
9

Prenatal diagnosis by chromosomal microarray analysis.
Brynn Levy, Ronald Wapner. Fertil Steril 2018
89
9

Copy number variation in human health, disease, and evolution.
Feng Zhang, Wenli Gu, Matthew E Hurles, James R Lupski. Annu Rev Genomics Hum Genet 2009
693
9

Rapid single-step induction of functional neurons from human pluripotent stem cells.
Yingsha Zhang, Changhui Pak, Yan Han, Henrik Ahlenius, Zhenjie Zhang, Soham Chanda, Samuele Marro, Christopher Patzke, Claudio Acuna, Jason Covy,[...]. Neuron 2013
571
9

Sex determination: why so many ways of doing it?
Doris Bachtrog, Judith E Mank, Catherine L Peichel, Mark Kirkpatrick, Sarah P Otto, Tia-Lynn Ashman, Matthew W Hahn, Jun Kitano, Itay Mayrose, Ray Ming,[...]. PLoS Biol 2014
421
6

A Concentration-Dependent Liquid Phase Separation Can Cause Toxicity upon Increased Protein Expression.
Benedetta Bolognesi, Nieves Lorenzo Gotor, Riddhiman Dhar, Davide Cirillo, Marta Baldrighi, Gian Gaetano Tartaglia, Ben Lehner. Cell Rep 2016
85
6

Estimating the protein burden limit of yeast cells by measuring the expression limits of glycolytic proteins.
Yuichi Eguchi, Koji Makanae, Tomohisa Hasunuma, Yuko Ishibashi, Keiji Kito, Hisao Moriya. Elife 2018
16
12

Characterising and predicting haploinsufficiency in the human genome.
Ni Huang, Insuk Lee, Edward M Marcotte, Matthew E Hurles. PLoS Genet 2010
408
6

Cancer genome landscapes.
Bert Vogelstein, Nickolas Papadopoulos, Victor E Velculescu, Shibin Zhou, Luis A Diaz, Kenneth W Kinzler. Science 2013
6

Analysis of protein-coding genetic variation in 60,706 humans.
Monkol Lek, Konrad J Karczewski, Eric V Minikel, Kaitlin E Samocha, Eric Banks, Timothy Fennell, Anne H O'Donnell-Luria, James S Ware, Andrew J Hill, Beryl B Cummings,[...]. Nature 2016
6




An in vivo map of the yeast protein interactome.
Kirill Tarassov, Vincent Messier, Christian R Landry, Stevo Radinovic, Mercedes M Serna Molina, Igor Shames, Yelena Malitskaya, Jackie Vogel, Howard Bussey, Stephen W Michnick. Science 2008
507
6

Cellular crowding imposes global constraints on the chemistry and evolution of proteomes.
Emmanuel D Levy, Subhajyoti De, Sarah A Teichmann. Proc Natl Acad Sci U S A 2012
101
6

Biopython: freely available Python tools for computational molecular biology and bioinformatics.
Peter J A Cock, Tiago Antao, Jeffrey T Chang, Brad A Chapman, Cymon J Cox, Andrew Dalke, Iddo Friedberg, Thomas Hamelryck, Frank Kauff, Bartek Wilczynski,[...]. Bioinformatics 2009
6

Extended Linkers Improve the Detection of Protein-protein Interactions (PPIs) by Dihydrofolate Reductase Protein-fragment Complementation Assay (DHFR PCA) in Living Cells.
Andrée-Ève Chrétien, Isabelle Gagnon-Arsenault, Alexandre K Dubé, Xavier Barbeau, Philippe C Després, Claudine Lamothe, Anne-Marie Dion-Côté, Patrick Lagüe, Christian R Landry. Mol Cell Proteomics 2018
5
40

Interactome networks and human disease.
Marc Vidal, Michael E Cusick, Albert-László Barabási. Cell 2011
898
6


Gene duplication can impart fragility, not robustness, in the yeast protein interaction network.
Guillaume Diss, Isabelle Gagnon-Arsenault, Anne-Marie Dion-Coté, Hélène Vignaud, Diana I Ascencio, Caroline M Berger, Christian R Landry. Science 2017
53
6

Evolution of protein complexes by duplication of homomeric interactions.
Jose B Pereira-Leal, Emmanuel D Levy, Christel Kamp, Sarah A Teichmann. Genome Biol 2007
123
6

Global analysis of protein localization in budding yeast.
Won-Ki Huh, James V Falvo, Luke C Gerke, Adam S Carroll, Russell W Howson, Jonathan S Weissman, Erin K O'Shea. Nature 2003
6


Consensus statement: chromosomal microarray is a first-tier clinical diagnostic test for individuals with developmental disabilities or congenital anomalies.
David T Miller, Margaret P Adam, Swaroop Aradhya, Leslie G Biesecker, Arthur R Brothman, Nigel P Carter, Deanna M Church, John A Crolla, Evan E Eichler, Charles J Epstein,[...]. Am J Hum Genet 2010
6

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
S F Altschul, T L Madden, A A Schäffer, J Zhang, Z Zhang, W Miller, D J Lipman. Nucleic Acids Res 1997
6

Proteomics. Tissue-based map of the human proteome.
Mathias Uhlén, Linn Fagerberg, Björn M Hallström, Cecilia Lindskog, Per Oksvold, Adil Mardinoglu, Åsa Sivertsson, Caroline Kampf, Evelina Sjöstedt, Anna Asplund,[...]. Science 2015
6

Functional impact of global rare copy number variation in autism spectrum disorders.
Dalila Pinto, Alistair T Pagnamenta, Lambertus Klei, Richard Anney, Daniele Merico, Regina Regan, Judith Conroy, Tiago R Magalhaes, Catarina Correia, Brett S Abrahams,[...]. Nature 2010
6

Global variation in copy number in the human genome.
Richard Redon, Shumpei Ishikawa, Karen R Fitch, Lars Feuk, George H Perry, T Daniel Andrews, Heike Fiegler, Michael H Shapero, Andrew R Carson, Wenwei Chen,[...]. Nature 2006
6

Structural variation in the human genome.
Lars Feuk, Andrew R Carson, Stephen W Scherer. Nat Rev Genet 2006
6


Evolution of Gene Duplication in Plants.
Nicholas Panchy, Melissa Lehti-Shiu, Shin-Han Shiu. Plant Physiol 2016
374
6

The evolutionary significance of polyploidy.
Yves Van de Peer, Eshchar Mizrachi, Kathleen Marchal. Nat Rev Genet 2017
384
6

The Post-GWAS Era: From Association to Function.
Michael D Gallagher, Alice S Chen-Plotkin. Am J Hum Genet 2018
195
6

Using an atlas of gene regulation across 44 human tissues to inform complex disease- and trait-associated variation.
Eric R Gamazon, Ayellet V Segrè, Martijn van de Bunt, Xiaoquan Wen, Hualin S Xi, Farhad Hormozdiari, Halit Ongen, Anuar Konkashbaev, Eske M Derks, François Aguet,[...]. Nat Genet 2018
168
6

TBX6 null variants and a common hypomorphic allele in congenital scoliosis.
N Wu, X Ming, J Xiao, Z Wu, X Chen, M Shinawi, Y Shen, G Yu, J Liu, H Xie,[...]. N Engl J Med 2015
145
6

Mirror extreme BMI phenotypes associated with gene dosage at the chromosome 16p11.2 locus.
Sébastien Jacquemont, Alexandre Reymond, Flore Zufferey, Louise Harewood, Robin G Walters, Zoltán Kutalik, Danielle Martinet, Yiping Shen, Armand Valsesia, Noam D Beckmann,[...]. Nature 2011
264
6

Association between microdeletion and microduplication at 16p11.2 and autism.
Lauren A Weiss, Yiping Shen, Joshua M Korn, Dan E Arking, David T Miller, Ragnheidur Fossdal, Evald Saemundsen, Hreinn Stefansson, Manuel A R Ferreira, Todd Green,[...]. N Engl J Med 2008
6

Emergence of a Homo sapiens-specific gene family and chromosome 16p11.2 CNV susceptibility.
Xander Nuttle, Giuliana Giannuzzi, Michael H Duyzend, Joshua G Schraiber, Iñigo Narvaiza, Peter H Sudmant, Osnat Penn, Giorgia Chiatante, Maika Malig, John Huddleston,[...]. Nature 2016
57
6

Implications of gene copy-number variation in health and diseases.
Suhani H Almal, Harish Padh. J Hum Genet 2012
84
6

A new highly penetrant form of obesity due to deletions on chromosome 16p11.2.
R G Walters, S Jacquemont, A Valsesia, A J de Smith, D Martinet, J Andersson, M Falchi, F Chen, J Andrieux, S Lobbens,[...]. Nature 2010
317
6

Microduplications of 16p11.2 are associated with schizophrenia.
Shane E McCarthy, Vladimir Makarov, George Kirov, Anjene M Addington, Jon McClellan, Seungtai Yoon, Diana O Perkins, Diane E Dickel, Mary Kusenda, Olga Krastoshevsky,[...]. Nat Genet 2009
478
6

Reciprocal Effects on Neurocognitive and Metabolic Phenotypes in Mouse Models of 16p11.2 Deletion and Duplication Syndromes.
Thomas Arbogast, Abdel-Mouttalib Ouagazzal, Claire Chevalier, Maksym Kopanitsa, Nurudeen Afinowi, Eugenia Migliavacca, Belinda S Cowling, Marie-Christine Birling, Marie-France Champy, Alexandre Reymond,[...]. PLoS Genet 2016
55
6

Recurrent reciprocal 16p11.2 rearrangements associated with global developmental delay, behavioural problems, dysmorphism, epilepsy, and abnormal head size.
Marwan Shinawi, Pengfei Liu, Sung-Hae L Kang, Joseph Shen, John W Belmont, Daryl A Scott, Frank J Probst, William J Craigen, Brett H Graham, Amber Pursley,[...]. J Med Genet 2010
317
6

Basic local alignment search tool.
S F Altschul, W Gish, W Miller, E W Myers, D J Lipman. J Mol Biol 1990
6

Selection in the evolution of gene duplications.
Fyodor A Kondrashov, Igor B Rogozin, Yuri I Wolf, Eugene V Koonin. Genome Biol 2002
441
6

Expression of tandem gene duplicates is often greater than twofold.
David W Loehlin, Sean B Carroll. Proc Natl Acad Sci U S A 2016
33
6

Chromosomal microarray versus karyotyping for prenatal diagnosis.
Ronald J Wapner, Christa Lese Martin, Brynn Levy, Blake C Ballif, Christine M Eng, Julia M Zachary, Melissa Savage, Lawrence D Platt, Daniel Saltzman, William A Grobman,[...]. N Engl J Med 2012
643
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.