A citation-based method for searching scientific literature

Christoph Lippert, Riccardo Sabatini, M Cyrus Maher, Eun Yong Kang, Seunghak Lee, Okan Arikan, Alena Harley, Axel Bernal, Peter Garst, Victor Lavrenko, Ken Yocum, Theodore Wong, Mingfu Zhu, Wen-Yun Yang, Chris Chang, Tim Lu, Charlie W H Lee, Barry Hicks, Smriti Ramakrishnan, Haibao Tang, Chao Xie, Jason Piper, Suzanne Brewerton, Yaron Turpaz, Amalio Telenti, Rhonda K Roby, Franz J Och, J Craig Venter. Proc Natl Acad Sci U S A 2017
Times Cited: 47







List of co-cited articles
152 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Identifying personal genomes by surname inference.
Melissa Gymrek, Amy L McGuire, David Golan, Eran Halperin, Yaniv Erlich. Science 2013
475
31

Privacy in the Genomic Era.
Muhammad Naveed, Erman Ayday, Ellen W Clayton, Jacques Fellay, Carl A Gunter, Jean-Pierre Hubaux, Bradley A Malin, Xiaofeng Wang. ACM Comput Surv 2015
58
23

Routes for breaching and protecting genetic privacy.
Yaniv Erlich, Arvind Narayanan. Nat Rev Genet 2014
143
21

Privacy Risks from Genomic Data-Sharing Beacons.
Suyash S Shringarpure, Carlos D Bustamante. Am J Hum Genet 2015
80
21

Resolving individuals contributing trace amounts of DNA to highly complex mixtures using high-density SNP genotyping microarrays.
Nils Homer, Szabolcs Szelinger, Margot Redman, David Duggan, Waibhav Tembe, Jill Muehling, John V Pearson, Dietrich A Stephan, Stanley F Nelson, David W Craig. PLoS Genet 2008
451
17

Modeling 3D facial shape from DNA.
Peter Claes, Denise K Liberton, Katleen Daniels, Kerri Matthes Rosana, Ellen E Quillen, Laurel N Pearson, Brian McEvoy, Marc Bauchet, Arslan A Zaidi, Wei Yao,[...]. PLoS Genet 2014
100
17

Addressing Beacon re-identification attacks: quantification and mitigation of privacy risks.
Jean Louis Raisaro, Florian Tramèr, Zhanglong Ji, Diyue Bu, Yongan Zhao, Knox Carey, David Lloyd, Heidi Sofia, Dixie Baker, Paul Flicek,[...]. J Am Med Inform Assoc 2017
34
20

A global reference for human genetic variation.
Adam Auton, Lisa D Brooks, Richard M Durbin, Erik P Garrison, Hyun Min Kang, Jan O Korbel, Jonathan L Marchini, Shane McCarthy, Gil A McVean, Gonçalo R Abecasis. Nature 2015
14

The HIrisPlex system for simultaneous prediction of hair and eye colour from DNA.
Susan Walsh, Fan Liu, Andreas Wollstein, Leda Kovatsi, Arwin Ralf, Agnieszka Kosiniak-Kamysz, Wojciech Branicki, Manfred Kayser. Forensic Sci Int Genet 2013
187
12

PRINCESS: Privacy-protecting Rare disease International Network Collaboration via Encryption through Software guard extensionS.
Feng Chen, Shuang Wang, Xiaoqian Jiang, Sijie Ding, Yao Lu, Jihoon Kim, S Cenk Sahinalp, Chisato Shimizu, Jane C Burns, Victoria J Wright,[...]. Bioinformatics 2017
36
16

Genetics. Genomic research and human subject privacy.
Zhen Lin, Art B Owen, Russ B Altman. Science 2004
181
12

Eye color and the prediction of complex phenotypes from genotypes.
Fan Liu, Kate van Duijn, Johannes R Vingerling, Albert Hofman, André G Uitterlinden, A Cecile J W Janssens, Manfred Kayser. Curr Biol 2009
148
10


HEALER: homomorphic computation of ExAct Logistic rEgRession for secure rare disease variants analysis in GWAS.
Shuang Wang, Yuchen Zhang, Wenrui Dai, Kristin Lauter, Miran Kim, Yuzhe Tang, Hongkai Xiong, Xiaoqian Jiang. Bioinformatics 2016
40
12

A new way to protect privacy in large-scale genome-wide association studies.
Liina Kamm, Dan Bogdanov, Sven Laur, Jaak Vilo. Bioinformatics 2013
35
14

Genome-wide mapping of global-to-local genetic effects on human facial shape.
Peter Claes, Jasmien Roosenboom, Julie D White, Tomek Swigut, Dzemila Sero, Jiarui Li, Myoung Keun Lee, Arslan Zaidi, Brooke C Mattern, Corey Liebowitz,[...]. Nat Genet 2018
75
10

Controlling the signal: Practical privacy protection of genomic data sharing through Beacon services.
Zhiyu Wan, Yevgeniy Vorobeychik, Murat Kantarcioglu, Bradley Malin. BMC Med Genomics 2017
10
50

Genome privacy: challenges, technical approaches to mitigate risk, and ethical considerations in the United States.
Shuang Wang, Xiaoqian Jiang, Siddharth Singh, Rebecca Marmor, Luca Bonomi, Dov Fox, Michelle Dow, Lucila Ohno-Machado. Ann N Y Acad Sci 2017
22
22

Deriving genomic diagnoses without revealing patient genomes.
Karthik A Jagadeesh, David J Wu, Johannes A Birgmeier, Dan Boneh, Gill Bejerano. Science 2017
32
15

Identity inference of genomic data using long-range familial searches.
Yaniv Erlich, Tal Shor, Itsik Pe'er, Shai Carmi. Science 2018
92
10

Genomic privacy and limits of individual detection in a pool.
Sriram Sankararaman, Guillaume Obozinski, Michael I Jordan, Eran Halperin. Nat Genet 2009
68
10

Protecting genomic data analytics in the cloud: state of the art and opportunities.
Haixu Tang, Xiaoqian Jiang, Xiaofeng Wang, Shuang Wang, Heidi Sofia, Dov Fox, Kristin Lauter, Bradley Malin, Amalio Telenti, Li Xiong,[...]. BMC Med Genomics 2016
17
23

Linkage disequilibrium matches forensic genetic records to disjoint genomic marker sets.
Michael D Edge, Bridget F B Algee-Hewitt, Trevor J Pemberton, Jun Z Li, Noah A Rosenberg. Proc Natl Acad Sci U S A 2017
18
22

Secure management of biomedical data with cryptographic hardware.
Mustafa Canim, Murat Kantarcioglu, Bradley Malin. IEEE Trans Inf Technol Biomed 2012
15
26

Expanding Access to Large-Scale Genomic Data While Promoting Privacy: A Game Theoretic Approach.
Zhiyu Wan, Yevgeniy Vorobeychik, Weiyi Xia, Ellen Wright Clayton, Murat Kantarcioglu, Bradley Malin. Am J Hum Genet 2017
15
26

FORESEE: Fully Outsourced secuRe gEnome Study basEd on homomorphic Encryption.
Yuchen Zhang, Wenrui Dai, Xiaoqian Jiang, Hongkai Xiong, Shuang Wang. BMC Med Inform Decis Mak 2015
21
19

Realizing privacy preserving genome-wide association studies.
Sean Simmons, Bonnie Berger. Bioinformatics 2016
15
26

Privacy-preserving techniques of genomic data-a survey.
Md Momin Al Aziz, Md Nazmus Sadat, Dima Alhadidi, Shuang Wang, Xiaoqian Jiang, Cheryl L Brown, Noman Mohammed. Brief Bioinform 2019
12
33

Exploring the Underlying Genetics of Craniofacial Morphology through Various Sources of Knowledge.
Jasmien Roosenboom, Greet Hens, Brooke C Mattern, Mark D Shriver, Peter Claes. Biomed Res Int 2016
18
22

The HIrisPlex-S system for eye, hair and skin colour prediction from DNA: Introduction and forensic developmental validation.
Lakshmi Chaitanya, Krystal Breslin, Sofia Zuñiga, Laura Wirken, Ewelina Pośpiech, Magdalena Kukla-Bartoszek, Titia Sijen, Peter de Knijff, Fan Liu, Wojciech Branicki,[...]. Forensic Sci Int Genet 2018
67
8


Aftermath of bustamante attack on genomic beacon service.
Md Momin Al Aziz, Reza Ghasemi, Md Waliullah, Noman Mohammed. BMC Med Genomics 2017
9
44


An Inference Attack on Genomic Data Using Kinship, Complex Correlations, and Phenotype Information.
Iman Deznabi, Mohammad Mobayen, Nazanin Jafari, Oznur Tastan, Erman Ayday. IEEE/ACM Trans Comput Biol Bioinform 2018
9
44

IrisPlex: a sensitive DNA tool for accurate prediction of blue and brown eye colour in the absence of ancestry information.
Susan Walsh, Fan Liu, Kaye N Ballantyne, Mannis van Oven, Oscar Lao, Manfred Kayser. Forensic Sci Int Genet 2011
163
8

Re-identification of individuals in genomic data-sharing beacons via allele inference.
Nora von Thenen, Erman Ayday, A Ercument Cicek. Bioinformatics 2019
15
26

Global skin colour prediction from DNA.
Susan Walsh, Lakshmi Chaitanya, Krystal Breslin, Charanya Muralidharan, Agnieszka Bronikowska, Ewelina Pospiech, Julia Koller, Leda Kovatsi, Andreas Wollstein, Wojciech Branicki,[...]. Hum Genet 2017
52
6

Redefining genomic privacy: trust and empowerment.
Yaniv Erlich, James B Williams, David Glazer, Kenneth Yocum, Nita Farahany, Maynard Olson, Arvind Narayanan, Lincoln D Stein, Jan A Witkowski, Robert C Kain. PLoS Biol 2014
50
6

Efficient privacy-preserving string search and an application in genomics.
Kana Shimizu, Koji Nuida, Gunnar Rätsch. Bioinformatics 2016
13
23

Privacy-preserving GWAS analysis on federated genomic datasets.
Scott D Constable, Yuzhe Tang, Shuang Wang, Xiaoqian Jiang, Steve Chapin. BMC Med Inform Decis Mak 2015
19
15

Re-identification of familial database records.
Bradley Malin. AMIA Annu Symp Proc 2006
24
12

Private genome analysis through homomorphic encryption.
Miran Kim, Kristin Lauter. BMC Med Inform Decis Mak 2015
22
13

Private and Efficient Query Processing on Outsourced Genomic Databases.
Reza Ghasemi, Md Momin Al Aziz, Noman Mohammed, Massoud Hadian Dehkordi, Xiaoqian Jiang. IEEE J Biomed Health Inform 2017
7
42

A cryptographic approach to securely share and query genomic sequences.
Murat Kantarcioglu, Wei Jiang, Ying Liu, Bradley Malin. IEEE Trans Inf Technol Biomed 2008
26
11

Genetics of the human face: Identification of large-effect single gene variants.
Daniel J M Crouch, Bruce Winney, Willem P Koppen, William J Christmas, Katarzyna Hutnik, Tammy Day, Devendra Meena, Abdelhamid Boumertit, Pirro Hysi, Ayrun Nessa,[...]. Proc Natl Acad Sci U S A 2018
21
14

A genome-wide association study identifies five loci influencing facial morphology in Europeans.
Fan Liu, Fedde van der Lijn, Claudia Schurmann, Gu Zhu, M Mallar Chakravarty, Pirro G Hysi, Andreas Wollstein, Oscar Lao, Marleen de Bruijne, M Arfan Ikram,[...]. PLoS Genet 2012
157
6

PRESAGE: PRivacy-preserving gEnetic testing via SoftwAre Guard Extension.
Feng Chen, Chenghong Wang, Wenrui Dai, Xiaoqian Jiang, Noman Mohammed, Md Momin Al Aziz, Md Nazmus Sadat, Cenk Sahinalp, Kristin Lauter, Shuang Wang. BMC Med Genomics 2017
14
21

A community effort to protect genomic data sharing, collaboration and outsourcing.
Shuang Wang, Xiaoqian Jiang, Haixu Tang, Xiaofeng Wang, Diyue Bu, Knox Carey, Stephanie Om Dyke, Dov Fox, Chao Jiang, Kristin Lauter,[...]. NPJ Genom Med 2017
12
25

Efficient and secure outsourcing of genomic data storage.
João Sá Sousa, Cédric Lefebvre, Zhicong Huang, Jean Louis Raisaro, Carlos Aguilar-Melchor, Marc-Olivier Killijian, Jean-Pierre Hubaux. BMC Med Genomics 2017
7
42



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.