A citation-based method for searching scientific literature

Michelle Vaz, Stephen Y Hwang, Ioannis Kagiampakis, Jillian Phallen, Ashwini Patil, Heather M O'Hagan, Lauren Murphy, Cynthia A Zahnow, Edward Gabrielson, Victor E Velculescu, Hariharan P Easwaran, Stephen B Baylin. Cancer Cell 2017
Times Cited: 110







List of co-cited articles
902 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Hallmarks of cancer: the next generation.
Douglas Hanahan, Robert A Weinberg. Cell 2011
12


Cancer statistics, 2019.
Rebecca L Siegel, Kimberly D Miller, Ahmedin Jemal. CA Cancer J Clin 2019
9

The hallmarks of aging.
Carlos López-Otín, Maria A Blasco, Linda Partridge, Manuel Serrano, Guido Kroemer. Cell 2013
8

limma powers differential expression analyses for RNA-sequencing and microarray studies.
Matthew E Ritchie, Belinda Phipson, Di Wu, Yifang Hu, Charity W Law, Wei Shi, Gordon K Smyth. Nucleic Acids Res 2015
8

Global cancer statistics 2018: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries.
Freddie Bray, Jacques Ferlay, Isabelle Soerjomataram, Rebecca L Siegel, Lindsey A Torre, Ahmedin Jemal. CA Cancer J Clin 2018
8

Cancer statistics, 2020.
Rebecca L Siegel, Kimberly D Miller, Ahmedin Jemal. CA Cancer J Clin 2020
8

Epigenetic plasticity and the hallmarks of cancer.
William A Flavahan, Elizabeth Gaskell, Bradley E Bernstein. Science 2017
530
7

Oxidative damage targets complexes containing DNA methyltransferases, SIRT1, and polycomb members to promoter CpG Islands.
Heather M O'Hagan, Wei Wang, Subhojit Sen, Christina Destefano Shields, Stella S Lee, Yang W Zhang, Eriko G Clements, Yi Cai, Leander Van Neste, Hariharan Easwaran,[...]. Cancer Cell 2011
350
7

The mutational landscapes of genetic and chemical models of Kras-driven lung cancer.
Peter M K Westcott, Kyle D Halliwill, Minh D To, Mamunur Rashid, Alistair G Rust, Thomas M Keane, Reyno Delrosario, Kuang-Yu Jen, Kay E Gurley, Christopher J Kemp,[...]. Nature 2015
212
7

Epigenetic Signatures of Cigarette Smoking.
Roby Joehanes, Allan C Just, Riccardo E Marioni, Luke C Pilling, Lindsay M Reynolds, Pooja R Mandaviya, Weihua Guan, Tao Xu, Cathy E Elks, Stella Aslibekyan,[...]. Circ Cardiovasc Genet 2016
400
7


Epigenetic Determinants of Cancer.
Stephen B Baylin, Peter A Jones. Cold Spring Harb Perspect Biol 2016
454
6



Epigenetic Therapy Ties MYC Depletion to Reversing Immune Evasion and Treating Lung Cancer.
Michael J Topper, Michelle Vaz, Katherine B Chiappinelli, Christina E DeStefano Shields, Noushin Niknafs, Ray-Whay Chiu Yen, Alyssa Wenzel, Jessica Hicks, Matthew Ballew, Meredith Stone,[...]. Cell 2017
220
6

Multiple cells-of-origin of mutant K-Ras-induced mouse lung adenocarcinoma.
Kate D Sutherland, Ji-Ying Song, Min Chul Kwon, Natalie Proost, John Zevenhoven, Anton Berns. Proc Natl Acad Sci U S A 2014
145
6

Lineage-negative progenitors mobilize to regenerate lung epithelium after major injury.
Andrew E Vaughan, Alexis N Brumwell, Ying Xi, Jeffrey E Gotts, Doug G Brownfield, Barbara Treutlein, Kevin Tan, Victor Tan, Feng Chun Liu, Mark R Looney,[...]. Nature 2015
364
6

Human lung epithelial cells progressed to malignancy through specific oncogenic manipulations.
Mitsuo Sato, Jill E Larsen, Woochang Lee, Han Sun, David S Shames, Maithili P Dalvi, Ruben D Ramirez, Hao Tang, John Michael DiMaio, Boning Gao,[...]. Mol Cancer Res 2013
137
6

A DNA hypermethylation module for the stem/progenitor cell signature of cancer.
Hariharan Easwaran, Sarah E Johnstone, Leander Van Neste, Joyce Ohm, Tim Mosbruger, Qiuju Wang, Martin J Aryee, Patrick Joyce, Nita Ahuja, Dan Weisenberger,[...]. Genome Res 2012
175
5

Stem cell divisions, somatic mutations, cancer etiology, and cancer prevention.
Cristian Tomasetti, Lu Li, Bert Vogelstein. Science 2017
468
5

Polycomb-mediated methylation on Lys27 of histone H3 pre-marks genes for de novo methylation in cancer.
Yeshayahu Schlesinger, Ravid Straussman, Ilana Keshet, Shlomit Farkash, Merav Hecht, Joseph Zimmerman, Eran Eden, Zohar Yakhini, Etti Ben-Shushan, Benjamin E Reubinoff,[...]. Nat Genet 2007
849
5

CHD4 Has Oncogenic Functions in Initiating and Maintaining Epigenetic Suppression of Multiple Tumor Suppressor Genes.
Limin Xia, Wenjie Huang, Marina Bellani, Michael M Seidman, Kaichun Wu, Daiming Fan, Yongzhan Nie, Yi Cai, Yang W Zhang, Li-Rong Yu,[...]. Cancer Cell 2017
83
6

Senescent cells harbour features of the cancer epigenome.
Hazel A Cruickshanks, Tony McBryan, David M Nelson, Nathan D Vanderkraats, Parisha P Shah, John van Tuyn, Taranjit Singh Rai, Claire Brock, Greg Donahue, Donncha S Dunican,[...]. Nat Cell Biol 2013
201
5

Cancer genome landscapes.
Bert Vogelstein, Nickolas Papadopoulos, Victor E Velculescu, Shibin Zhou, Luis A Diaz, Kenneth W Kinzler. Science 2013
5

DNA methylation-based measures of biological age: meta-analysis predicting time to death.
Brian H Chen, Riccardo E Marioni, Elena Colicino, Marjolein J Peters, Cavin K Ward-Caviness, Pei-Chien Tsai, Nicholas S Roetker, Allan C Just, Ellen W Demerath, Weihua Guan,[...]. Aging (Albany NY) 2016
477
5

Identification of cancer initiating cells in K-Ras driven lung adenocarcinoma.
Sara Mainardi, Nieves Mijimolle, Sarah Francoz, Carolina Vicente-Dueñas, Isidro Sánchez-García, Mariano Barbacid. Proc Natl Acad Sci U S A 2014
107
5

Mutational signatures associated with tobacco smoking in human cancer.
Ludmil B Alexandrov, Young Seok Ju, Kerstin Haase, Peter Van Loo, Iñigo Martincorena, Serena Nik-Zainal, Yasushi Totoki, Akihiro Fujimoto, Hidewaki Nakagawa, Tatsuhiro Shibata,[...]. Science 2016
519
5

Signatures of mutational processes in human cancer.
Ludmil B Alexandrov, Serena Nik-Zainal, David C Wedge, Samuel A J R Aparicio, Sam Behjati, Andrew V Biankin, Graham R Bignell, Niccolò Bolli, Ake Borg, Anne-Lise Børresen-Dale,[...]. Nature 2013
5

The basics of epithelial-mesenchymal transition.
Raghu Kalluri, Robert A Weinberg. J Clin Invest 2009
5

Type 2 alveolar cells are stem cells in adult lung.
Christina E Barkauskas, Michael J Cronce, Craig R Rackley, Emily J Bowie, Douglas R Keene, Barry R Stripp, Scott H Randell, Paul W Noble, Brigid L M Hogan. J Clin Invest 2013
830
5

Cigarette smoking and DNA methylation.
Ken W K Lee, Zdenka Pausova. Front Genet 2013
236
5

Hypomethylation of smoking-related genes is associated with future lung cancer in four prospective cohorts.
Francesca Fasanelli, Laura Baglietto, Erica Ponzi, Florence Guida, Gianluca Campanella, Mattias Johansson, Kjell Grankvist, Mikael Johansson, Manuela Bianca Assumma, Alessio Naccarati,[...]. Nat Commun 2015
138
5

A prognostic DNA methylation signature for stage I non-small-cell lung cancer.
Juan Sandoval, Jesus Mendez-Gonzalez, Ernest Nadal, Guoan Chen, F Javier Carmona, Sergi Sayols, Sebastian Moran, Holger Heyn, Miguel Vizoso, Antonio Gomez,[...]. J Clin Oncol 2013
192
5

The biology and management of non-small cell lung cancer.
Roy S Herbst, Daniel Morgensztern, Chris Boshoff. Nature 2018
5

Subtyping Lung Cancer Using DNA Methylation in Liquid Biopsies.
Sandra P Nunes, Francisca Diniz, Catarina Moreira-Barbosa, Vera Constâncio, Ana Victor Silva, Júlio Oliveira, Marta Soares, Sofia Paulino, Ana Luísa Cunha, Jéssica Rodrigues,[...]. J Clin Med 2019
23
21


Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays.
Martin J Aryee, Andrew E Jaffe, Hector Corrada-Bravo, Christine Ladd-Acosta, Andrew P Feinberg, Kasper D Hansen, Rafael A Irizarry. Bioinformatics 2014
4

A stem cell-like chromatin pattern may predispose tumor suppressor genes to DNA hypermethylation and heritable silencing.
Joyce E Ohm, Kelly M McGarvey, Xiaobing Yu, Linzhao Cheng, Kornel E Schuebel, Leslie Cope, Helai P Mohammad, Wei Chen, Vincent C Daniel, Wayne Yu,[...]. Nat Genet 2007
787
4


Age-dependent DNA methylation of genes that are suppressed in stem cells is a hallmark of cancer.
Andrew E Teschendorff, Usha Menon, Aleksandra Gentry-Maharaj, Susan J Ramus, Daniel J Weisenberger, Hui Shen, Mihaela Campan, Houtan Noushmehr, Christopher G Bell, A Peter Maxwell,[...]. Genome Res 2010
561
4

Rare cell variability and drug-induced reprogramming as a mode of cancer drug resistance.
Sydney M Shaffer, Margaret C Dunagin, Stefan R Torborg, Eduardo A Torre, Benjamin Emert, Clemens Krepler, Marilda Beqiri, Katrin Sproesser, Patricia A Brafford, Min Xiao,[...]. Nature 2017
484
4

Genomic landscape of non-small cell lung cancer in smokers and never-smokers.
Ramaswamy Govindan, Li Ding, Malachi Griffith, Janakiraman Subramanian, Nathan D Dees, Krishna L Kanchi, Christopher A Maher, Robert Fulton, Lucinda Fulton, John Wallis,[...]. Cell 2012
808
4

Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1.
Mamta Tahiliani, Kian Peng Koh, Yinghua Shen, William A Pastor, Hozefa Bandukwala, Yevgeny Brudno, Suneet Agarwal, Lakshminarayan M Iyer, David R Liu, L Aravind,[...]. Science 2009
4

Analysis of lung tumor initiation and progression using conditional expression of oncogenic K-ras.
E L Jackson, N Willis, K Mercer, R T Bronson, D Crowley, R Montoya, T Jacks, D A Tuveson. Genes Dev 2001
4

Carcinogen-induced gene promoter hypermethylation is mediated by DNMT1 and causal for transformation of immortalized bronchial epithelial cells.
Leah A Damiani, Christin M Yingling, Shuguang Leng, Paul E Romo, Jun Nakamura, Steven A Belinsky. Cancer Res 2008
100
4

Distinct patterns of somatic genome alterations in lung adenocarcinomas and squamous cell carcinomas.
Joshua D Campbell, Anton Alexandrov, Jaegil Kim, Jeremiah Wala, Alice H Berger, Chandra Sekhar Pedamallu, Sachet A Shukla, Guangwu Guo, Angela N Brooks, Bradley A Murray,[...]. Nat Genet 2016
603
4


Basal cells as stem cells of the mouse trachea and human airway epithelium.
Jason R Rock, Mark W Onaitis, Emma L Rawlins, Yun Lu, Cheryl P Clark, Yan Xue, Scott H Randell, Brigid L M Hogan. Proc Natl Acad Sci U S A 2009
908
4

p63(+)Krt5(+) distal airway stem cells are essential for lung regeneration.
Wei Zuo, Ting Zhang, Daniel Zheng'An Wu, Shou Ping Guan, Audrey-Ann Liew, Yusuke Yamamoto, Xia Wang, Siew Joo Lim, Matthew Vincent, Mark Lessard,[...]. Nature 2015
281
4


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.