A citation-based method for searching scientific literature

Michael Rape. Nat Rev Mol Cell Biol 2018
Times Cited: 235







List of co-cited articles
913 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Ubiquitination in disease pathogenesis and treatment.
Doris Popovic, Domagoj Vucic, Ivan Dikic. Nat Med 2014
523
27

Ubiquitin modifications.
Kirby N Swatek, David Komander. Cell Res 2016
810
20

The ubiquitin code.
David Komander, Michael Rape. Annu Rev Biochem 2012
18

Mechanisms of Deubiquitinase Specificity and Regulation.
Tycho E T Mevissen, David Komander. Annu Rev Biochem 2017
430
13

Ubiquitin Ligases: Structure, Function, and Regulation.
Ning Zheng, Nitzan Shabek. Annu Rev Biochem 2017
522
12

RING domain E3 ubiquitin ligases.
Raymond J Deshaies, Claudio A P Joazeiro. Annu Rev Biochem 2009
11

The increasing complexity of the ubiquitin code.
Richard Yau, Michael Rape. Nat Cell Biol 2016
517
11

Mechanisms underlying ubiquitination.
C M Pickart. Annu Rev Biochem 2001
10

Breaking the chains: deubiquitylating enzyme specificity begets function.
Michael J Clague, Sylvie Urbé, David Komander. Nat Rev Mol Cell Biol 2019
259
10

Structural insights into the catalysis and regulation of E3 ubiquitin ligases.
Lori Buetow, Danny T Huang. Nat Rev Mol Cell Biol 2016
259
9

Ubiquitin ligases in oncogenic transformation and cancer therapy.
Daniela Senft, Jianfei Qi, Ze'ev A Ronai. Nat Rev Cancer 2018
202
8

Ubiquitin signaling and autophagy.
Paolo Grumati, Ivan Dikic. J Biol Chem 2018
151
8

E2 enzymes: more than just middle men.
Mikaela D Stewart, Tobias Ritterhoff, Rachel E Klevit, Peter S Brzovic. Cell Res 2016
239
7


De-ubiquitination and ubiquitin ligase domains of A20 downregulate NF-kappaB signalling.
Ingrid E Wertz, Karen M O'Rourke, Honglin Zhou, Michael Eby, L Aravind, Somasekar Seshagiri, Ping Wu, Christian Wiesmann, Rohan Baker, David L Boone,[...]. Nature 2004
7

Deubiquitylating enzymes and drug discovery: emerging opportunities.
Jeanine A Harrigan, Xavier Jacq, Niall M Martin, Stephen P Jackson. Nat Rev Drug Discov 2018
309
7

Principles of Ubiquitin-Dependent Signaling.
Eugene Oh, David Akopian, Michael Rape. Annu Rev Cell Dev Biol 2018
127
7


Distinct proteostasis circuits cooperate in nuclear and cytoplasmic protein quality control.
Rahul S Samant, Christine M Livingston, Emily M Sontag, Judith Frydman. Nature 2018
86
8

Assembly and Function of Heterotypic Ubiquitin Chains in Cell-Cycle and Protein Quality Control.
Richard G Yau, Kerstin Doerner, Erick R Castellanos, Diane L Haakonsen, Achim Werner, Nan Wang, X William Yang, Nadia Martinez-Martin, Marissa L Matsumoto, Vishva M Dixit,[...]. Cell 2017
148
7

The ubiquitin system.
A Hershko, A Ciechanover. Annu Rev Biochem 1998
7

SUMO and the robustness of cancer.
Jacob-Sebastian Seeler, Anne Dejean. Nat Rev Cancer 2017
197
6

Cell-fate determination by ubiquitin-dependent regulation of translation.
Achim Werner, Shintaro Iwasaki, Colleen A McGourty, Sofia Medina-Ruiz, Nia Teerikorpi, Indro Fedrigo, Nicholas T Ingolia, Michael Rape. Nature 2015
104
6

Branching Out: Improved Signaling by Heterotypic Ubiquitin Chains.
Diane L Haakonsen, Michael Rape. Trends Cell Biol 2019
64
9

Breaking the chains: structure and function of the deubiquitinases.
David Komander, Michael J Clague, Sylvie Urbé. Nat Rev Mol Cell Biol 2009
6

Function and regulation of cullin-RING ubiquitin ligases.
Matthew D Petroski, Raymond J Deshaies. Nat Rev Mol Cell Biol 2005
6

Ubiquitin signaling in immune responses.
Hongbo Hu, Shao-Cong Sun. Cell Res 2016
219
5


The demographics of the ubiquitin system.
Michael J Clague, Claire Heride, Sylvie Urbé. Trends Cell Biol 2015
184
5

Building and remodelling Cullin-RING E3 ubiquitin ligases.
John R Lydeard, Brenda A Schulman, J Wade Harper. EMBO Rep 2013
212
5

Targeted protein degradation: expanding the toolbox.
Matthieu Schapira, Matthew F Calabrese, Alex N Bullock, Craig M Crews. Nat Rev Drug Discov 2019
278
5

Dual E1 activation systems for ubiquitin differentially regulate E2 enzyme charging.
Jianping Jin, Xue Li, Steven P Gygi, J Wade Harper. Nature 2007
245
5

Regulation of DNA double-strand break repair by ubiquitin and ubiquitin-like modifiers.
Petra Schwertman, Simon Bekker-Jensen, Niels Mailand. Nat Rev Mol Cell Biol 2016
194
5

Targeting the ubiquitin system in cancer therapy.
Daniela Hoeller, Ivan Dikic. Nature 2009
427
5

Defining the human deubiquitinating enzyme interaction landscape.
Mathew E Sowa, Eric J Bennett, Steven P Gygi, J Wade Harper. Cell 2009
5

Enhanced protein degradation by branched ubiquitin chains.
Hermann-Josef Meyer, Michael Rape. Cell 2014
282
5

Activity-based E3 ligase profiling uncovers an E3 ligase with esterification activity.
Kuan-Chuan Pao, Nicola T Wood, Axel Knebel, Karim Rafie, Mathew Stanley, Peter D Mabbitt, Ramasubramanian Sundaramoorthy, Kay Hofmann, Daan M F van Aalten, Satpal Virdee. Nature 2018
100
5


Post-translational regulation of ubiquitin signaling.
Lei Song, Zhao-Qing Luo. J Cell Biol 2019
86
5

Ubiquitin chain diversity at a glance.
Masato Akutsu, Ivan Dikic, Anja Bremm. J Cell Sci 2016
261
5

Multisite dependency of an E3 ligase controls monoubiquitylation-dependent cell fate decisions.
Achim Werner, Regina Baur, Nia Teerikorpi, Deniz U Kaya, Michael Rape. Elife 2018
18
27

Building ubiquitin chains: E2 enzymes at work.
Yihong Ye, Michael Rape. Nat Rev Mol Cell Biol 2009
642
5

Structure and Function of the 26S Proteasome.
Jared A M Bard, Ellen A Goodall, Eric R Greene, Erik Jonsson, Ken C Dong, Andreas Martin. Annu Rev Biochem 2018
279
5

Regulation of proteasome assembly and activity in health and disease.
Adrien Rousseau, Anne Bertolotti. Nat Rev Mol Cell Biol 2018
168
5

A20 prevents inflammasome-dependent arthritis by inhibiting macrophage necroptosis through its ZnF7 ubiquitin-binding domain.
Apostolos Polykratis, Arne Martens, Remzi Onur Eren, Yoshitaka Shirasaki, Mai Yamagishi, Yoshifumi Yamaguchi, Sotaro Uemura, Masayuki Miura, Bernhard Holzmann, George Kollias,[...]. Nat Cell Biol 2019
74
5

Resolving the Complexity of Ubiquitin Networks.
Katarzyna Kliza, Koraljka Husnjak. Front Mol Biosci 2020
41
9

Ubiquitin-like Protein Conjugation: Structures, Chemistry, and Mechanism.
Laurent Cappadocia, Christopher D Lima. Chem Rev 2018
204
4

The spatial and temporal organization of ubiquitin networks.
Caroline Grabbe, Koraljka Husnjak, Ivan Dikic. Nat Rev Mol Cell Biol 2011
240
4

An inhibitor of NEDD8-activating enzyme as a new approach to treat cancer.
Teresa A Soucy, Peter G Smith, Michael A Milhollen, Allison J Berger, James M Gavin, Sharmila Adhikari, James E Brownell, Kristine E Burke, David P Cardin, Stephen Critchley,[...]. Nature 2009
4

Dynamic ubiquitin signaling in cell cycle regulation.
Samuel Gilberto, Matthias Peter. J Cell Biol 2017
53
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.