A citation-based method for searching scientific literature

Fanfan Zhang, Ding Tang, Yi Shen, Zhihui Xue, Wenqing Shi, Lijun Ren, Guijie Du, Yafei Li, Zhukuan Cheng. Plant Cell 2017
Times Cited: 25







List of co-cited articles
415 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Interphase chromosomes in Arabidopsis are organized as well defined chromocenters from which euchromatin loops emanate.
Paul Fransz, J Hans De Jong, Martin Lysak, Monica Ruffini Castiglione, Ingo Schubert. Proc Natl Acad Sci U S A 2002
308
32

Nonrandom domain organization of the Arabidopsis genome at the nuclear periphery.
Xiuli Bi, Ying-Juan Cheng, Bo Hu, Xiaoli Ma, Rui Wu, Jia-Wei Wang, Chang Liu. Genome Res 2017
59
28

The LINC complex contributes to heterochromatin organisation and transcriptional gene silencing in plants.
Axel Poulet, Céline Duc, Maxime Voisin, Sophie Desset, Sylvie Tutois, Emmanuel Vanrobays, Matthias Benoit, David E Evans, Aline V Probst, Christophe Tatout. J Cell Sci 2017
46
28

Prominent topologically associated domains differentiate global chromatin packing in rice from Arabidopsis.
Chang Liu, Ying-Juan Cheng, Jia-Wei Wang, Detlef Weigel. Nat Plants 2017
102
28

Recombination, Pairing, and Synapsis of Homologs during Meiosis.
Denise Zickler, Nancy Kleckner. Cold Spring Harb Perspect Biol 2015
313
28

The molecular biology of meiosis in plants.
Raphaël Mercier, Christine Mézard, Eric Jenczewski, Nicolas Macaisne, Mathilde Grelon. Annu Rev Plant Biol 2015
221
24

The role of rice HEI10 in the formation of meiotic crossovers.
Kejian Wang, Mo Wang, Ding Tang, Yi Shen, Chunbo Miao, Qing Hu, Tiegang Lu, Zhukuan Cheng. PLoS Genet 2012
81
24

MEIOTIC F-BOX Is Essential for Male Meiotic DNA Double-Strand Break Repair in Rice.
Yi He, Chong Wang, James D Higgins, Junping Yu, Jie Zong, Pingli Lu, Dabing Zhang, Wanqi Liang. Plant Cell 2016
25
24

Arabidopsis PCH2 Mediates Meiotic Chromosome Remodeling and Maturation of Crossovers.
Christophe Lambing, Kim Osman, Komsun Nuntasoontorn, Allan West, James D Higgins, Gregory P Copenhaver, Jianhua Yang, Susan J Armstrong, Karl Mechtler, Elisabeth Roitinger,[...]. PLoS Genet 2015
54
24

The central element protein ZEP1 of the synaptonemal complex regulates the number of crossovers during meiosis in rice.
Mo Wang, Kejian Wang, Ding Tang, Cunxu Wei, Ming Li, Yi Shen, Zhengchang Chi, Minghong Gu, Zhukuan Cheng. Plant Cell 2010
104
24

Genome-wide Hi-C analyses in wild-type and mutants reveal high-resolution chromatin interactions in Arabidopsis.
Suhua Feng, Shawn J Cokus, Veit Schubert, Jixian Zhai, Matteo Pellegrini, Steven E Jacobsen. Mol Cell 2014
186
24


Genome-wide Hi-C analysis reveals extensive hierarchical chromatin interactions in rice.
Qianli Dong, Ning Li, Xiaochong Li, Zan Yuan, Dejian Xie, Xiaofei Wang, Jianing Li, Yanan Yu, Jinbin Wang, Baoxu Ding,[...]. Plant J 2018
64
24

Chromosome territory arrangement and homologous pairing in nuclei of Arabidopsis thaliana are predominantly random except for NOR-bearing chromosomes.
Ales Pecinka, Veit Schubert, Armin Meister, Gregor Kreth, Marco Klatte, Martin A Lysak, Jörg Fuchs, Ingo Schubert. Chromosoma 2004
160
24

Genome-wide analysis of chromatin packing in Arabidopsis thaliana at single-gene resolution.
Chang Liu, Congmao Wang, George Wang, Claude Becker, Maricris Zaidem, Detlef Weigel. Genome Res 2016
108
24

Absence of SUN1 and SUN2 proteins in Arabidopsis thaliana leads to a delay in meiotic progression and defects in synapsis and recombination.
Javier Varas, Katja Graumann, Kim Osman, Mónica Pradillo, David E Evans, Juan L Santos, Susan J Armstrong. Plant J 2015
48
24

Plant lamin-like proteins mediate chromatin tethering at the nuclear periphery.
Bo Hu, Nan Wang, Xiuli Bi, Ezgi Süheyla Karaaslan, Anna-Lena Weber, Wangsheng Zhu, Kenneth Wayne Berendzen, Chang Liu. Genome Biol 2019
42
24

PAIR3, an axis-associated protein, is essential for the recruitment of recombination elements onto meiotic chromosomes in rice.
Kejian Wang, Mo Wang, Ding Tang, Yi Shen, Baoxiang Qin, Ming Li, Zhukuan Cheng. Mol Biol Cell 2011
53
20

3D Chromatin Architecture of Large Plant Genomes Determined by Local A/B Compartments.
Pengfei Dong, Xiaoyu Tu, Po-Yu Chu, Peitao Lü, Ning Zhu, Donald Grierson, Baijuan Du, Pinghua Li, Silin Zhong. Mol Plant 2017
112
20

Genome-wide analysis of local chromatin packing in Arabidopsis thaliana.
Congmao Wang, Chang Liu, Damian Roqueiro, Dominik Grimm, Rebecca Schwab, Claude Becker, Christa Lanz, Detlef Weigel. Genome Res 2015
153
20

Evolutionarily Conserved Principles Predict 3D Chromatin Organization.
M Jordan Rowley, Michael H Nichols, Xiaowen Lyu, Masami Ando-Kuri, I Sarahi M Rivera, Karen Hermetz, Ping Wang, Yijun Ruan, Victor G Corces. Mol Cell 2017
225
20

Evolutionary dynamics of 3D genome architecture following polyploidization in cotton.
Maojun Wang, Pengcheng Wang, Min Lin, Zhengxiu Ye, Guoliang Li, Lili Tu, Chao Shen, Jianying Li, Qingyong Yang, Xianlong Zhang. Nat Plants 2018
66
20

Topological domains in mammalian genomes identified by analysis of chromatin interactions.
Jesse R Dixon, Siddarth Selvaraj, Feng Yue, Audrey Kim, Yan Li, Yin Shen, Ming Hu, Jun S Liu, Bing Ren. Nature 2012
20

Comprehensive mapping of long-range interactions reveals folding principles of the human genome.
Erez Lieberman-Aiden, Nynke L van Berkum, Louise Williams, Maxim Imakaev, Tobias Ragoczy, Agnes Telling, Ido Amit, Bryan R Lajoie, Peter J Sabo, Michael O Dorschner,[...]. Science 2009
20


OsSPO11-1 is essential for both homologous chromosome pairing and crossover formation in rice.
Hengxiu Yu, Mo Wang, Ding Tang, Kejian Wang, Fuli Chen, Zhiyun Gong, Minghong Gu, Zhukuan Cheng. Chromosoma 2010
46
20

Three-dimensional chromatin packing and positioning of plant genomes.
Ezgi Süheyla Doğan, Chang Liu. Nat Plants 2018
42
20


Nucleosomes and DNA methylation shape meiotic DSB frequency in Arabidopsis thaliana transposons and gene regulatory regions.
Kyuha Choi, Xiaohui Zhao, Andrew J Tock, Christophe Lambing, Charles J Underwood, Thomas J Hardcastle, Heïdi Serra, Juhyun Kim, Hyun Seob Cho, Jaeil Kim,[...]. Genome Res 2018
89
16

The synaptonemal complex protein ZYP1 is required for imposition of meiotic crossovers in barley.
Abdellah Barakate, James D Higgins, Sebastian Vivera, Jennifer Stephens, Ruth M Perry, Luke Ramsay, Isabelle Colas, Helena Oakey, Robbie Waugh, F Chris H Franklin,[...]. Plant Cell 2014
44
16

The Axial Element Protein DESYNAPTIC2 Mediates Meiotic Double-Strand Break Formation and Synaptonemal Complex Assembly in Maize.
Ding Hua Lee, Yu-Hsin Kao, Jia-Chi Ku, Chien-Yu Lin, Robert Meeley, Ya-Shiun Jan, Chung-Ju Rachel Wang. Plant Cell 2015
17
23

Sexual-lineage-specific DNA methylation regulates meiosis in Arabidopsis.
James Walker, Hongbo Gao, Jingyi Zhang, Billy Aldridge, Martin Vickers, James D Higgins, Xiaoqi Feng. Nat Genet 2018
74
16

Live imaging of rapid chromosome movements in meiotic prophase I in maize.
Moira J Sheehan, Wojciech P Pawlowski. Proc Natl Acad Sci U S A 2009
62
16

Natural variation and dosage of the HEI10 meiotic E3 ligase control Arabidopsis crossover recombination.
Piotr A Ziolkowski, Charles J Underwood, Christophe Lambing, Marina Martinez-Garcia, Emma J Lawrence, Liliana Ziolkowska, Catherine Griffin, Kyuha Choi, F Chris H Franklin, Robert A Martienssen,[...]. Genes Dev 2017
70
16

Pathways to meiotic recombination in Arabidopsis thaliana.
Kim Osman, James D Higgins, Eugenio Sanchez-Moran, Susan J Armstrong, F Chris H Franklin. New Phytol 2011
129
16



Entering the Next Dimension: Plant Genomes in 3D.
Mariana Sotelo-Silveira, Ricardo A Chávez Montes, Jose R Sotelo-Silveira, Nayelli Marsch-Martínez, Stefan de Folter. Trends Plant Sci 2018
29
16


Targeted Degradation of CTCF Decouples Local Insulation of Chromosome Domains from Genomic Compartmentalization.
Elphège P Nora, Anton Goloborodko, Anne-Laure Valton, Johan H Gibcus, Alec Uebersohn, Nezar Abdennur, Job Dekker, Leonid A Mirny, Benoit G Bruneau. Cell 2017
626
16

A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping.
Suhas S P Rao, Miriam H Huntley, Neva C Durand, Elena K Stamenova, Ivan D Bochkov, James T Robinson, Adrian L Sanborn, Ido Machol, Arina D Omer, Eric S Lander,[...]. Cell 2014
16

Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C.
Borbala Mifsud, Filipe Tavares-Cadete, Alice N Young, Robert Sugar, Stefan Schoenfelder, Lauren Ferreira, Steven W Wingett, Simon Andrews, William Grey, Philip A Ewels,[...]. Nat Genet 2015
493
16

Genome-Wide Analysis of the Arabidopsis Replication Timing Program.
Lorenzo Concia, Ashley M Brooks, Emily Wheeler, Gregory J Zynda, Emily E Wear, Chantal LeBlanc, Jawon Song, Tae-Jin Lee, Pete E Pascuzzi, Robert A Martienssen,[...]. Plant Physiol 2018
18
22

Cohesin Loss Eliminates All Loop Domains.
Suhas S P Rao, Su-Chen Huang, Brian Glenn St Hilaire, Jesse M Engreitz, Elizabeth M Perez, Kyong-Rim Kieffer-Kwon, Adrian L Sanborn, Sarah E Johnstone, Gavin D Bascom, Ivan D Bochkov,[...]. Cell 2017
667
16


Put your 3D glasses on: plant chromatin is on show.
Natalia Y Rodriguez-Granados, Juan S Ramirez-Prado, Alaguraj Veluchamy, David Latrasse, Cécile Raynaud, Martin Crespi, Federico Ariel, Moussa Benhamed. J Exp Bot 2016
38
16

Altered chromatin compaction and histone methylation drive non-additive gene expression in an interspecific Arabidopsis hybrid.
Wangsheng Zhu, Bo Hu, Claude Becker, Ezgi Süheyla Doğan, Kenneth Wayne Berendzen, Detlef Weigel, Chang Liu. Genome Biol 2017
47
16

Asymmetric subgenome selection and cis-regulatory divergence during cotton domestication.
Maojun Wang, Lili Tu, Min Lin, Zhongxu Lin, Pengcheng Wang, Qingyong Yang, Zhengxiu Ye, Chao Shen, Jianying Li, Lin Zhang,[...]. Nat Genet 2017
179
16

Chromosome organization and dynamics during interphase, mitosis, and meiosis in plants.
Choon-Lin Tiang, Yan He, Wojciech P Pawlowski. Plant Physiol 2012
66
16

Identification of Nucleolus-Associated Chromatin Domains Reveals a Role for the Nucleolus in 3D Organization of the A. thaliana Genome.
Frédéric Pontvianne, Marie-Christine Carpentier, Nathalie Durut, Veronika Pavlištová, Karin Jaške, Šárka Schořová, Hugues Parrinello, Marine Rohmer, Craig S Pikaard, Miloslava Fojtová,[...]. Cell Rep 2016
71
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.