A citation-based method for searching scientific literature

Nancy Walker-Kopp, Ashleigh J Jackobel, Gianno N Pannafino, Paola A Morocho, Xia Xu, Bruce A Knutson. Hum Mol Genet 2017
Times Cited: 9







List of co-cited articles
25 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Mutations in genes encoding subunits of RNA polymerases I and III cause Treacher Collins syndrome.
Johannes G Dauwerse, Jill Dixon, Saskia Seland, Claudia A L Ruivenkamp, Arie van Haeringen, Lies H Hoefsloot, Dorien J M Peters, Agnes Clement-de Boers, Cornelia Daumer-Haas, Robert Maiwald,[...]. Nat Genet 2011
192
66

Molecular structures of unbound and transcribing RNA polymerase III.
Niklas A Hoffmann, Arjen J Jakobi, María Moreno-Morcillo, Sebastian Glatt, Jan Kosinski, Wim J H Hagen, Carsten Sachse, Christoph W Müller. Nature 2015
108
44

Recessive mutations in POLR1C cause a leukodystrophy by impairing biogenesis of RNA polymerase III.
Isabelle Thiffault, Nicole I Wolf, Diane Forget, Kether Guerrero, Luan T Tran, Karine Choquet, Mathieu Lavallée-Adam, Christian Poitras, Bernard Brais, Grace Yoon,[...]. Nat Commun 2015
82
44

Mutations of POLR3A encoding a catalytic subunit of RNA polymerase Pol III cause a recessive hypomyelinating leukodystrophy.
Geneviève Bernard, Eliane Chouery, Maria Lisa Putorti, Martine Tétreault, Asako Takanohashi, Giovanni Carosso, Isabelle Clément, Odile Boespflug-Tanguy, Diana Rodriguez, Valérie Delague,[...]. Am J Hum Genet 2011
149
44

The Roles of RNA Polymerase I and III Subunits Polr1c and Polr1d in Craniofacial Development and in Zebrafish Models of Treacher Collins Syndrome.
Kristin E Noack Watt, Annita Achilleos, Cynthia L Neben, Amy E Merrill, Paul A Trainor. PLoS Genet 2016
47
33

Recessive mutations in POLR3B, encoding the second largest subunit of Pol III, cause a rare hypomyelinating leukodystrophy.
Martine Tétreault, Karine Choquet, Simona Orcesi, Davide Tonduti, Umberto Balottin, Martin Teichmann, Sébastien Fribourg, Raphael Schiffmann, Bernard Brais, Adeline Vanderver,[...]. Am J Hum Genet 2011
96
33


UCSF Chimera--a visualization system for exploratory research and analysis.
Eric F Pettersen, Thomas D Goddard, Conrad C Huang, Gregory S Couch, Daniel M Greenblatt, Elaine C Meng, Thomas E Ferrin. J Comput Chem 2004
22

Absence of neurological abnormalities in mice homozygous for the Polr3a G672E hypomyelinating leukodystrophy mutation.
Karine Choquet, Sharon Yang, Robyn D Moir, Diane Forget, Roxanne Larivière, Annie Bouchard, Christian Poitras, Nicolas Sgarioto, Marie-Josée Dicaire, Forough Noohi,[...]. Mol Brain 2017
19
22

The Phyre2 web portal for protein modeling, prediction and analysis.
Lawrence A Kelley, Stefans Mezulis, Christopher M Yates, Mark N Wass, Michael J E Sternberg. Nat Protoc 2015
22

Near-atomic resolution visualization of human transcription promoter opening.
Yuan He, Chunli Yan, Jie Fang, Carla Inouye, Robert Tjian, Ivaylo Ivanov, Eva Nogales. Nature 2016
172
22

The cBio cancer genomics portal: an open platform for exploring multidimensional cancer genomics data.
Ethan Cerami, Jianjiong Gao, Ugur Dogrusoz, Benjamin E Gross, Selcuk Onur Sumer, Bülent Arman Aksoy, Anders Jacobsen, Caitlin J Byrne, Michael L Heuer, Erik Larsson,[...]. Cancer Discov 2012
22

Structural insights into transcription initiation by yeast RNA polymerase I.
Yashar Sadian, Lucas Tafur, Jan Kosinski, Arjen J Jakobi, Rene Wetzel, Katarzyna Buczak, Wim Jh Hagen, Martin Beck, Carsten Sachse, Christoph W Müller. EMBO J 2017
38
22

Structural Basis of RNA Polymerase I Transcription Initiation.
Christoph Engel, Tobias Gubbey, Simon Neyer, Sarah Sainsbury, Christiane Oberthuer, Carlo Baejen, Carrie Bernecky, Patrick Cramer. Cell 2017
63
22

Structural mechanism of ATP-independent transcription initiation by RNA polymerase I.
Yan Han, Chunli Yan, Thi Hoang Duong Nguyen, Ashleigh J Jackobel, Ivaylo Ivanov, Bruce A Knutson, Yuan He. Elife 2017
38
22

Specific combinations of biallelic POLR3A variants cause Wiedemann-Rautenstrauch syndrome.
Stefano Paolacci, Yun Li, Emanuele Agolini, Emanuele Bellacchio, Carlos E Arboleda-Bustos, Dido Carrero, Debora Bertola, Lihadh Al-Gazali, Mariel Alders, Janine Altmüller,[...]. J Med Genet 2018
24
22

Bi-allelic POLR3A Loss-of-Function Variants Cause Autosomal-Recessive Wiedemann-Rautenstrauch Syndrome.
Jennifer A Wambach, Daniel J Wegner, Nivedita Patni, Martin Kircher, Marcia C Willing, Dustin Baldridge, Chao Xing, Anil K Agarwal, Samantha A Schrier Vergano, Chirag Patel,[...]. Am J Hum Genet 2018
24
22

Mutations in POLR3A and POLR3B encoding RNA Polymerase III subunits cause an autosomal-recessive hypomyelinating leukoencephalopathy.
Hirotomo Saitsu, Hitoshi Osaka, Masayuki Sasaki, Jun-Ichi Takanashi, Keisuke Hamada, Akio Yamashita, Hidehiro Shibayama, Masaaki Shiina, Yukiko Kondo, Kiyomi Nishiyama,[...]. Am J Hum Genet 2011
102
22

Structural basis of RNA polymerase III transcription initiation.
Guillermo Abascal-Palacios, Ewan Phillip Ramsay, Fabienne Beuron, Edward Morris, Alessandro Vannini. Nature 2018
71
22


Mutations in RNA Polymerase III genes and defective DNA sensing in adults with varicella-zoster virus CNS infection.
Madalina E Carter-Timofte, Anders F Hansen, Mette Christiansen, Søren R Paludan, Trine H Mogensen. Genes Immun 2019
30
22

RIG-I-dependent sensing of poly(dA:dT) through the induction of an RNA polymerase III-transcribed RNA intermediate.
Andrea Ablasser, Franz Bauernfeind, Gunther Hartmann, Eicke Latz, Katherine A Fitzgerald, Veit Hornung. Nat Immunol 2009
587
22


Inborn errors in RNA polymerase III underlie severe varicella zoster virus infections.
Benson Ogunjimi, Shen-Ying Zhang, Katrine B Sørensen, Kristian A Skipper, Madalina Carter-Timofte, Gaspard Kerner, Stefanie Luecke, Thaneas Prabakaran, Yujia Cai, Josephina Meester,[...]. J Clin Invest 2017
72
22


Recessive Mutations in POLR3B Encoding RNA Polymerase III Subunit Causing Diffuse Hypomyelination in Patients with 4H Leukodystrophy with Polymicrogyria and Cataracts.
E Jurkiewicz, D Dunin-Wąsowicz, D Gieruszczak-Białek, K Malczyk, K Guerrero, M Gutierrez, L Tran, G Bernard. Clin Neuroradiol 2017
11
11

RNA polymerase I structure and transcription regulation.
Christoph Engel, Sarah Sainsbury, Alan C Cheung, Dirk Kostrewa, Patrick Cramer. Nature 2013
130
11

RNA polymerase I-Rrn3 complex at 4.8 Å resolution.
Christoph Engel, Jürgen Plitzko, Patrick Cramer. Nat Commun 2016
37
11

SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information.
Marco Biasini, Stefan Bienert, Andrew Waterhouse, Konstantin Arnold, Gabriel Studer, Tobias Schmidt, Florian Kiefer, Tiziano Gallo Cassarino, Martino Bertoni, Lorenza Bordoli,[...]. Nucleic Acids Res 2014
11


Large exonic deletions in POLR3B gene cause POLR3-related leukodystrophy.
Mariana Gutierrez, Isabelle Thiffault, Kether Guerrero, Gabriel Á Martos-Moreno, Luan T Tran, William Benko, Marjo S van der Knaap, Rosalina M L van Spaendonk, Nicole I Wolf, Geneviève Bernard. Orphanet J Rare Dis 2015
12
11

Protein structure prediction on the Web: a case study using the Phyre server.
Lawrence A Kelley, Michael J E Sternberg. Nat Protoc 2009
11

UCSF Chimera, MODELLER, and IMP: an integrated modeling system.
Zheng Yang, Keren Lasker, Dina Schneidman-Duhovny, Ben Webb, Conrad C Huang, Eric F Pettersen, Thomas D Goddard, Elaine C Meng, Andrej Sali, Thomas E Ferrin. J Struct Biol 2012
312
11

Protein structure homology modeling using SWISS-MODEL workspace.
Lorenza Bordoli, Florian Kiefer, Konstantin Arnold, Pascal Benkert, James Battey, Torsten Schwede. Nat Protoc 2009
813
11

Whole exome sequencing identifies a POLRID mutation segregating in a father and two daughters with findings of Klippel-Feil and Treacher Collins syndromes.
Philip F Giampietro, Linlea Armstrong, Alex Stoddard, Robert D Blank, Janet Livingston, Cathy L Raggio, Kristen Rasmussen, Michael Pickart, Rachel Lorier, Amy Turner,[...]. Am J Med Genet A 2015
3
33

Molecular Structures of Transcribing RNA Polymerase I.
Lucas Tafur, Yashar Sadian, Niklas A Hoffmann, Arjen J Jakobi, Rene Wetzel, Wim J H Hagen, Carsten Sachse, Christoph W Müller. Mol Cell 2016
50
11

A unique enhancer boundary complex on the mouse ribosomal RNA genes persists after loss of Rrn3 or UBF and the inactivation of RNA polymerase I transcription.
Chelsea Herdman, Jean-Clement Mars, Victor Y Stefanovsky, Michel G Tremblay, Marianne Sabourin-Felix, Helen Lindsay, Mark D Robinson, Tom Moss. PLoS Genet 2017
30
11

Glutamine methylation in histone H2A is an RNA-polymerase-I-dedicated modification.
Peter Tessarz, Helena Santos-Rosa, Sam C Robson, Kathrine B Sylvestersen, Christopher J Nelson, Michael L Nielsen, Tony Kouzarides. Nature 2014
130
11

Redox Signaling by the RNA Polymerase III TFIIB-Related Factor Brf2.
Jerome Gouge, Karishma Satia, Nicolas Guthertz, Marcella Widya, Andrew James Thompson, Pascal Cousin, Oleksandr Dergai, Nouria Hernandez, Alessandro Vannini. Cell 2015
56
11

Metabolic programming a lean phenotype by deregulation of RNA polymerase III.
Ian M Willis, Robyn D Moir, Nouria Hernandez. Proc Natl Acad Sci U S A 2018
10
11



Small ribosomal protein RPS0 stimulates translation initiation by mediating 40S-binding of eIF3 via its direct contact with the eIF3a/TIF32 subunit.
Tomáš Kouba, István Dányi, Stanislava Gunišová, Vanda Munzarová, Vladislava Vlčková, Lucie Cuchalová, Andreas Neueder, Philipp Milkereit, Leoš Shivaya Valášek. PLoS One 2012
29
11

Cell-fate determination by ubiquitin-dependent regulation of translation.
Achim Werner, Shintaro Iwasaki, Colleen A McGourty, Sofia Medina-Ruiz, Nia Teerikorpi, Indro Fedrigo, Nicholas T Ingolia, Michael Rape. Nature 2015
92
11

The complete chemical structure of Saccharomyces cerevisiae rRNA: partial pseudouridylation of U2345 in 25S rRNA by snoRNA snR9.
Masato Taoka, Yuko Nobe, Yuka Yamaki, Yoshio Yamauchi, Hideaki Ishikawa, Nobuhiro Takahashi, Hiroshi Nakayama, Toshiaki Isobe. Nucleic Acids Res 2016
52
11

Actin-dependent localization of an RNA encoding a cell-fate determinant in yeast.
P A Takizawa, A Sil, J R Swedlow, I Herskowitz, R D Vale. Nature 1997
308
11


Structure and function of ribosomal protein S4 genes on the human and mouse sex chromosomes.
A R Zinn, R K Alagappan, L G Brown, I Wool, D C Page. Mol Cell Biol 1994
76
11

Nucleotide modifications in three functionally important regions of the Saccharomyces cerevisiae ribosome affect translation accuracy.
Agnès Baudin-Baillieu, Céline Fabret, Xue-Hai Liang, Dorota Piekna-Przybylska, Maurille J Fournier, Jean-Pierre Rousset. Nucleic Acids Res 2009
91
11

Methylation of yeast ribosomal protein Rpl3 promotes translational elongation fidelity.
Qais Al-Hadid, Kevin Roy, Guillaume Chanfreau, Steven G Clarke. RNA 2016
14
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.