A citation-based method for searching scientific literature

E Reble, A Dineen, C L Barr. Genes Brain Behav 2018
Times Cited: 23







List of co-cited articles
87 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Dysfunctional gene splicing as a potential contributor to neuropsychiatric disorders.
Stephen J Glatt, Ori S Cohen, Stephen V Faraone, Ming T Tsuang. Am J Med Genet B Neuropsychiatr Genet 2011
38
26

Transcriptome-wide isoform-level dysregulation in ASD, schizophrenia, and bipolar disorder.
Michael J Gandal, Pan Zhang, Evi Hadjimichael, Rebecca L Walker, Chao Chen, Shuang Liu, Hyejung Won, Harm van Bakel, Merina Varghese, Yongjun Wang,[...]. Science 2018
498
26

DISC1 splice variants are upregulated in schizophrenia and associated with risk polymorphisms.
Kenji Nakata, Barbara K Lipska, Thomas M Hyde, Tianzhang Ye, Erin N Newburn, Yukitaka Morita, Radhakrishna Vakkalanka, Maxim Barenboim, Yoshitatsu Sei, Daniel R Weinberger,[...]. Proc Natl Acad Sci U S A 2009
136
17

STAR: ultrafast universal RNA-seq aligner.
Alexander Dobin, Carrie A Davis, Felix Schlesinger, Jorg Drenkow, Chris Zaleski, Sonali Jha, Philippe Batut, Mark Chaisson, Thomas R Gingeras. Bioinformatics 2013
17


Variation in alternative splicing across human tissues.
Gene Yeo, Dirk Holste, Gabriel Kreiman, Christopher B Burge. Genome Biol 2004
377
17

Schizophrenia.
Michael J Owen, Akira Sawa, Preben B Mortensen. Lancet 2016
868
13

The contribution of de novo coding mutations to autism spectrum disorder.
Ivan Iossifov, Brian J O'Roak, Stephan J Sanders, Michael Ronemus, Niklas Krumm, Dan Levy, Holly A Stessman, Kali T Witherspoon, Laura Vives, Karynne E Patterson,[...]. Nature 2014
13

Genome-wide expression analysis reveals dysregulation of myelination-related genes in chronic schizophrenia.
Y Hakak, J R Walker, C Li, W H Wong, K L Davis, J D Buxbaum, V Haroutunian, A A Fienberg. Proc Natl Acad Sci U S A 2001
950
13

Disease-associated intronic variants in the ErbB4 gene are related to altered ErbB4 splice-variant expression in the brain in schizophrenia.
Amanda J Law, Joel E Kleinman, Daniel R Weinberger, Cynthia Shannon Weickert. Hum Mol Genet 2007
231
13


GAD1 alternative transcripts and DNA methylation in human prefrontal cortex and hippocampus in brain development, schizophrenia.
R Tao, K N Davis, C Li, J H Shin, Y Gao, A E Jaffe, M C Gondré-Lewis, D R Weinberger, J E Kleinman, T M Hyde. Mol Psychiatry 2018
35
13

Alternative isoform regulation in human tissue transcriptomes.
Eric T Wang, Rickard Sandberg, Shujun Luo, Irina Khrebtukova, Lu Zhang, Christine Mayr, Stephen F Kingsmore, Gary P Schroth, Christopher B Burge. Nature 2008
13

The neurogenetics of alternative splicing.
Celine K Vuong, Douglas L Black, Sika Zheng. Nat Rev Neurosci 2016
166
13

Genome-wide changes in lncRNA, splicing, and regional gene expression patterns in autism.
Neelroop N Parikshak, Vivek Swarup, T Grant Belgard, Manuel Irimia, Gokul Ramaswami, Michael J Gandal, Christopher Hartl, Virpi Leppa, Luis de la Torre Ubieta, Jerry Huang,[...]. Nature 2016
355
13

Dendritic structural plasticity and neuropsychiatric disease.
Marc P Forrest, Euan Parnell, Peter Penzes. Nat Rev Neurosci 2018
225
8

Human QKI, a potential regulator of mRNA expression of human oligodendrocyte-related genes involved in schizophrenia.
Karolina Aberg, Peter Saetre, Niclas Jareborg, Elena Jazin. Proc Natl Acad Sci U S A 2006
154
8

Genetic architectures of psychiatric disorders: the emerging picture and its implications.
Patrick F Sullivan, Mark J Daly, Michael O'Donovan. Nat Rev Genet 2012
777
8

Systematic localization of common disease-associated variation in regulatory DNA.
Matthew T Maurano, Richard Humbert, Eric Rynes, Robert E Thurman, Eric Haugen, Hao Wang, Alex P Reynolds, Richard Sandstrom, Hongzhu Qu, Jennifer Brody,[...]. Science 2012
8

Oligodendrocyte genes, white matter tract integrity, and cognition in schizophrenia.
Aristotle N Voineskos, Daniel Felsky, Natasa Kovacevic, Arun K Tiwari, Clement Zai, M Mallar Chakravarty, Nancy J Lobaugh, Martha E Shenton, Tarek K Rajji, Dielle Miranda,[...]. Cereb Cortex 2013
58
8

Novel schizophrenia risk factor pathways regulate FEZ1 to advance oligodendroglia development.
Xianjun Chen, Li Ku, Ruyi Mei, Guanglu Liu, Chongchong Xu, Zhexing Wen, Xiaofeng Zhao, Fei Wang, Lan Xiao, Yue Feng. Transl Psychiatry 2017
13
15

Altered ErbB4 splicing and cortical parvalbumin interneuron dysfunction in schizophrenia and mood disorders.
Daniel W Chung, Youjin Chung, H Holly Bazmi, David A Lewis. Neuropsychopharmacology 2018
29
8

Investigation of the prenatal expression patterns of 108 schizophrenia-associated genetic loci.
Rebecca Birnbaum, Andrew E Jaffe, Qiang Chen, Thomas M Hyde, Joel E Kleinman, Daniel R Weinberger. Biol Psychiatry 2015
38
8

Electron microscopy of oligodendroglia in severe mental illness.
N Uranova, D Orlovskaya, O Vikhreva, I Zimina, N Kolomeets, V Vostrikov, V Rachmanova. Brain Res Bull 2001
365
8

A polygenic burden of rare disruptive mutations in schizophrenia.
Shaun M Purcell, Jennifer L Moran, Menachem Fromer, Douglas Ruderfer, Nadia Solovieff, Panos Roussos, Colm O'Dushlaine, Kimberly Chambert, Sarah E Bergen, Anna Kähler,[...]. Nature 2014
965
8

Rescuing qkV dysmyelination by a single isoform of the selective RNA-binding protein QKI.
Lixia Zhao, Donghua Tian, Mingjing Xia, Wendy B Macklin, Yue Feng. J Neurosci 2006
43
8

Human QKI, a new candidate gene for schizophrenia involved in myelination.
Karolina Aberg, Peter Saetre, Eva Lindholm, Birgit Ekholm, Ulf Pettersson, Rolf Adolfsson, Elena Jazin. Am J Med Genet B Neuropsychiatr Genet 2006
85
8


Genome-wide association analysis identifies 30 new susceptibility loci for schizophrenia.
Zhiqiang Li, Jianhua Chen, Hao Yu, Lin He, Yifeng Xu, Dai Zhang, Qizhong Yi, Changgui Li, Xingwang Li, Jiawei Shen,[...]. Nat Genet 2017
254
8

Genetic insights into the neurodevelopmental origins of schizophrenia.
Rebecca Birnbaum, Daniel R Weinberger. Nat Rev Neurosci 2017
236
8

Behavioral, Neurophysiological, and Synaptic Impairment in a Transgenic Neuregulin1 (NRG1-IV) Murine Schizophrenia Model.
Francesco Papaleo, Feng Yang, Clare Paterson, Sara Palumbo, Gregory V Carr, Yanhong Wang, Kirsten Floyd, Wenwei Huang, Craig J Thomas, Jingshan Chen,[...]. J Neurosci 2016
41
8


A method and server for predicting damaging missense mutations.
Ivan A Adzhubei, Steffen Schmidt, Leonid Peshkin, Vasily E Ramensky, Anna Gerasimova, Peer Bork, Alexey S Kondrashov, Shamil R Sunyaev. Nat Methods 2010
8


SIFT: Predicting amino acid changes that affect protein function.
Pauline C Ng, Steven Henikoff. Nucleic Acids Res 2003
8

Cytoscape: a software environment for integrated models of biomolecular interaction networks.
Paul Shannon, Andrew Markiel, Owen Ozier, Nitin S Baliga, Jonathan T Wang, Daniel Ramage, Nada Amin, Benno Schwikowski, Trey Ideker. Genome Res 2003
8

Autism spectrum disorder: insights into convergent mechanisms from transcriptomics.
Mathieu Quesnel-Vallières, Robert J Weatheritt, Sabine P Cordes, Benjamin J Blencowe. Nat Rev Genet 2019
76
8


RNA splicing. The human splicing code reveals new insights into the genetic determinants of disease.
Hui Y Xiong, Babak Alipanahi, Leo J Lee, Hannes Bretschneider, Daniele Merico, Ryan K C Yuen, Yimin Hua, Serge Gueroussov, Hamed S Najafabadi, Timothy R Hughes,[...]. Science 2015
634
8

Identification of loci associated with schizophrenia by genome-wide association and follow-up.
Michael C O'Donovan, Nicholas Craddock, Nadine Norton, Hywel Williams, Timothy Peirce, Valentina Moskvina, Ivan Nikolov, Marian Hamshere, Liam Carroll, Lyudmila Georgieva,[...]. Nat Genet 2008
826
8

Relationship between schizophrenia and changes in the expression of the long non-coding RNAs Meg3, Miat, Neat1 and Neat2.
Jiaqi Li, Li Zhu, Fanglin Guan, Zhilan Yan, Dan Liu, Wei Han, Teng Chen. J Psychiatr Res 2018
36
8

Annotation-free quantification of RNA splicing using LeafCutter.
Yang I Li, David A Knowles, Jack Humphrey, Alvaro N Barbeira, Scott P Dickinson, Hae Kyung Im, Jonathan K Pritchard. Nat Genet 2018
242
8

The lncRNA Malat1 is dispensable for mouse development but its transcription plays a cis-regulatory role in the adult.
Bin Zhang, Gayatri Arun, Yuntao S Mao, Zsolt Lazar, Gene Hung, Gourab Bhattacharjee, Xiaokun Xiao, Carmen J Booth, Jie Wu, Chaolin Zhang,[...]. Cell Rep 2012
430
8

MEN epsilon/beta nuclear-retained non-coding RNAs are up-regulated upon muscle differentiation and are essential components of paraspeckles.
Hongjae Sunwoo, Marcel E Dinger, Jeremy E Wilusz, Paulo P Amaral, John S Mattick, David L Spector. Genome Res 2009
477
8

Mechanisms of Long Non-coding RNAs in Mammalian Nervous System Development, Plasticity, Disease, and Evolution.
James A Briggs, Ernst J Wolvetang, John S Mattick, John L Rinn, Guy Barry. Neuron 2015
269
8

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration.
Helga Thorvaldsdóttir, James T Robinson, Jill P Mesirov. Brief Bioinform 2013
8

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
8

RNA mis-splicing in disease.
Marina M Scotti, Maurice S Swanson. Nat Rev Genet 2016
592
8

Analysis of protein-coding genetic variation in 60,706 humans.
Monkol Lek, Konrad J Karczewski, Eric V Minikel, Kaitlin E Samocha, Eric Banks, Timothy Fennell, Anne H O'Donnell-Luria, James S Ware, Andrew J Hill, Beryl B Cummings,[...]. Nature 2016
8


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.