A citation-based method for searching scientific literature

Fengyun Ni, Elena Kondrashkina, Qinghua Wang. Virology 2018
Times Cited: 6







List of co-cited articles
37 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


UCSF Chimera--a visualization system for exploratory research and analysis.
Eric F Pettersen, Thomas D Goddard, Conrad C Huang, Gregory S Couch, Daniel M Greenblatt, Elaine C Meng, Thomas E Ferrin. J Comput Chem 2004
83

Comparative structural analysis of haemagglutinin proteins from type A influenza viruses: conserved and variable features.
Irene Righetto, Adelaide Milani, Giovanni Cattoli, Francesco Filippini. BMC Bioinformatics 2014
7
33


Specific electrostatic interactions between charged amino acid residues regulate binding of von Willebrand factor to blood platelets.
Gianluca Interlandi, Olga Yakovenko, An-Yue Tu, Jeff Harris, Jennie Le, Junmei Chen, José A López, Wendy E Thomas. J Biol Chem 2017
10
33

Electrostatic aspects of protein-protein interactions.
F B Sheinerman, R Norel, B Honig. Curr Opin Struct Biol 2000
515
33


Combining crystallographic information and an aspherical-atom data bank in the evaluation of the electrostatic interaction energy in an enzyme-substrate complex: influenza neuraminidase inhibition.
Paulina M Dominiak, Anatoliy Volkov, Adam P Dominiak, Katarzyna N Jarzembska, Philip Coppens. Acta Crystallogr D Biol Crystallogr 2009
34
33

Molecular basis of a pandemic of avian-type influenza virus.
Nongluk Sriwilaijaroen, Yasuo Suzuki. Methods Mol Biol 2014
12
33

The role of influenza A virus hemagglutinin residues 226 and 228 in receptor specificity and host range restriction.
A Vines, K Wells, M Matrosovich, M R Castrucci, T Ito, Y Kawaoka. J Virol 1998
186
33

Evolution of the receptor binding phenotype of influenza A (H5) viruses.
Alexandra Gambaryan, Alexander Tuzikov, Galina Pazynina, Nicolai Bovin, Amanda Balish, Alexander Klimov. Virology 2006
139
33

Electrostatic design of protein-protein association rates.
Gideon Schreiber, Yossi Shaul, Kay E Gottschalk. Methods Mol Biol 2006
28
33

Enabling the 'host jump': structural determinants of receptor-binding specificity in influenza A viruses.
Yi Shi, Ying Wu, Wei Zhang, Jianxun Qi, George F Gao. Nat Rev Microbiol 2014
134
33


Influenza pandemics of the 20th century.
Edwin D Kilbourne. Emerg Infect Dis 2006
569
33

P20A inhibits HIV-1 fusion through its electrostatic interaction with the distal region of the gp41 fusion core.
Shushu Fu, Pei Tong, Yue Tan, Yun Zhu, Ying-Hua Chen. Microbes Infect 2015
2
100

The antigenic architecture of the hemagglutinin of influenza H5N1 viruses.
Tony Velkov, Chi Ong, Mark A Baker, Hyunsuh Kim, Jian Li, Roger L Nation, Johnny X Huang, Matthew A Cooper, Steve Rockman. Mol Immunol 2013
41
33

Virulence-associated substitution D222G in the hemagglutinin of 2009 pandemic influenza A(H1N1) virus affects receptor binding.
Salin Chutinimitkul, Sander Herfst, John Steel, Anice C Lowen, Jianqiang Ye, Debby van Riel, Eefje J A Schrauwen, Theo M Bestebroer, Björn Koel, David F Burke,[...]. J Virol 2010
156
33


webPIPSA: a web server for the comparison of protein interaction properties.
Stefan Richter, Anne Wenzel, Matthias Stein, Razif R Gabdoulline, Rebecca C Wade. Nucleic Acids Res 2008
61
33

Influenza virus Matrix Protein M1 preserves its conformation with pH, changing multimerization state at the priming stage due to electrostatics.
Eleonora V Shtykova, Liubov A Dadinova, Natalia V Fedorova, Andrey E Golanikov, Elena N Bogacheva, Alexander L Ksenofontov, Liudmila A Baratova, Liudmila A Shilova, Vsevolod Yu Tashkin, Timur R Galimzyanov,[...]. Sci Rep 2017
14
33

[Effect of mutations changing the antigenic specificity on the receptor-binding activity of the influenza virus hemagglutinin of H1 and H5 subtypes].
T A Timofeeva, A V Ignat'eva, I A Rudneva, L V Mochalova, N V Bovin, N V Kaverin. Vopr Virusol 2013
2
100


Zika virus NS1 structure reveals diversity of electrostatic surfaces among flaviviruses.
Hao Song, Jianxun Qi, Joel Haywood, Yi Shi, George F Gao. Nat Struct Mol Biol 2016
113
33

Electrostatic Variation of Haemagglutinin as a Hallmark of the Evolution of Avian Influenza Viruses.
Alireza Heidari, Irene Righetto, Francesco Filippini. Sci Rep 2018
5
40

Coot: model-building tools for molecular graphics.
Paul Emsley, Kevin Cowtan. Acta Crystallogr D Biol Crystallogr 2004
33


MotionCor2: anisotropic correction of beam-induced motion for improved cryo-electron microscopy.
Shawn Q Zheng, Eugene Palovcak, Jean-Paul Armache, Kliment A Verba, Yifan Cheng, David A Agard. Nat Methods 2017
33

A Site of Vulnerability on the Influenza Virus Hemagglutinin Head Domain Trimer Interface.
Sandhya Bangaru, Shanshan Lang, Michael Schotsaert, Hillary A Vanderven, Xueyong Zhu, Nurgun Kose, Robin Bombardi, Jessica A Finn, Stephen J Kent, Pavlo Gilchuk,[...]. Cell 2019
94
33

Conserved epitope on influenza-virus hemagglutinin head defined by a vaccine-induced antibody.
Donald D Raymond, Goran Bajic, Jack Ferdman, Pirada Suphaphiphat, Ethan C Settembre, M Anthony Moody, Aaron G Schmidt, Stephen C Harrison. Proc Natl Acad Sci U S A 2018
65
33

Structural basis of preexisting immunity to the 2009 H1N1 pandemic influenza virus.
Rui Xu, Damian C Ekiert, Jens C Krause, Rong Hai, James E Crowe, Ian A Wilson. Science 2010
436
33

Memory B Cells that Cross-React with Group 1 and Group 2 Influenza A Viruses Are Abundant in Adult Human Repertoires.
Kevin R McCarthy, Akiko Watanabe, Masayuki Kuraoka, Khoi T Do, Charles E McGee, Gregory D Sempowski, Thomas B Kepler, Aaron G Schmidt, Garnett Kelsoe, Stephen C Harrison. Immunity 2018
67
33

Influenza immunization elicits antibodies specific for an egg-adapted vaccine strain.
Donald D Raymond, Shaun M Stewart, Jiwon Lee, Jack Ferdman, Goran Bajic, Khoi T Do, Michael J Ernandes, Pirada Suphaphiphat, Ethan C Settembre, Philip R Dormitzer,[...]. Nat Med 2016
63
33

Viral receptor-binding site antibodies with diverse germline origins.
Aaron G Schmidt, Matthew D Therkelsen, Shaun Stewart, Thomas B Kepler, Hua-Xin Liao, M Anthony Moody, Barton F Haynes, Stephen C Harrison. Cell 2015
98
33

Broadly neutralizing human antibody that recognizes the receptor-binding pocket of influenza virus hemagglutinin.
James R R Whittle, Ruijun Zhang, Surender Khurana, Lisa R King, Jody Manischewitz, Hana Golding, Philip R Dormitzer, Barton F Haynes, Emmanuel B Walter, M Anthony Moody,[...]. Proc Natl Acad Sci U S A 2011
302
33

Antibody recognition of the pandemic H1N1 Influenza virus hemagglutinin receptor binding site.
Minsun Hong, Peter S Lee, Ryan M B Hoffman, Xueyong Zhu, Jens C Krause, Nick S Laursen, Sung-Il Yoon, Langzhou Song, Lynda Tussey, James E Crowe,[...]. J Virol 2013
101
33

Antibodies to a Conserved Influenza Head Interface Epitope Protect by an IgG Subtype-Dependent Mechanism.
Akiko Watanabe, Kevin R McCarthy, Masayuki Kuraoka, Aaron G Schmidt, Yu Adachi, Taishi Onodera, Keisuke Tonouchi, Timothy M Caradonna, Goran Bajic, Shengli Song,[...]. Cell 2019
74
33

Influenza Antigen Engineering Focuses Immune Responses to a Subdominant but Broadly Protective Viral Epitope.
Goran Bajic, Max J Maron, Yu Adachi, Taishi Onodera, Kevin R McCarthy, Charles E McGee, Gregory D Sempowski, Yoshimasa Takahashi, Garnett Kelsoe, Masayuki Kuraoka,[...]. Cell Host Microbe 2019
67
33

Toward the estimation of the absolute quality of individual protein structure models.
Pascal Benkert, Marco Biasini, Torsten Schwede. Bioinformatics 2011
16

Human infection with an avian H9N2 influenza A virus in Hong Kong in 2003.
K M Butt, Gavin J D Smith, Honglin Chen, L J Zhang, Y H Connie Leung, K M Xu, Wilina Lim, Robert G Webster, K Y Yuen, J S Malik Peiris,[...]. J Clin Microbiol 2005
436
16



Emerging Influenza Strains in the Last Two Decades: A Threat of a New Pandemic?
Claudia Trombetta, Simona Piccirella, Daniele Perini, Otfried Kistner, Emanuele Montomoli. Vaccines (Basel) 2015
25
16

PDB2PQR: expanding and upgrading automated preparation of biomolecular structures for molecular simulations.
Todd J Dolinsky, Paul Czodrowski, Hui Li, Jens E Nielsen, Jan H Jensen, Gerhard Klebe, Nathan A Baker. Nucleic Acids Res 2007
16


SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information.
Marco Biasini, Stefan Bienert, Andrew Waterhouse, Konstantin Arnold, Gabriel Studer, Tobias Schmidt, Florian Kiefer, Tiziano Gallo Cassarino, Martino Bertoni, Lorenza Bordoli,[...]. Nucleic Acids Res 2014
16

Influenza at the animal-human interface: a review of the literature for virological evidence of human infection with swine or avian influenza viruses other than A(H5N1).
G S Freidl, A Meijer, E de Bruin, M de Nardi, O Munoz, I Capua, A C Breed, K Harris, A Hill, R Kosmider,[...]. Euro Surveill 2014
80
16


Influenza Research Database: An integrated bioinformatics resource for influenza virus research.
Yun Zhang, Brian D Aevermann, Tavis K Anderson, David F Burke, Gwenaelle Dauphin, Zhiping Gu, Sherry He, Sanjeev Kumar, Christopher N Larsen, Alexandra J Lee,[...]. Nucleic Acids Res 2017
137
16

MOAG-4 promotes the aggregation of α-synuclein by competing with self-protective electrostatic interactions.
Yuichi Yoshimura, Mats A Holmberg, Predrag Kukic, Camilla B Andersen, Alejandro Mata-Cabana, S Fabio Falsone, Michele Vendruscolo, Ellen A A Nollen, Frans A A Mulder. J Biol Chem 2017
19
16



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.