A citation-based method for searching scientific literature

Nobuhiro Hiraishi, Yo-Ichi Ishida, Haruka Sudo, Masami Nagahama. Biochem Biophys Res Commun 2018
Times Cited: 14







List of co-cited articles
149 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


AAA-ATPase NVL2 acts on MTR4-exosome complex to dissociate the nucleolar protein WDR74.
Nobuhiro Hiraishi, Yo-ichi Ishida, Masami Nagahama. Biochem Biophys Res Commun 2015
15
42

NVL2, a nucleolar AAA-ATPase, is associated with the nuclear exosome and is involved in pre-rRNA processing.
Yuki Yoshikatsu, Yo-ichi Ishida, Haruka Sudo, Keizo Yuasa, Akihiko Tsuji, Masami Nagahama. Biochem Biophys Res Commun 2015
16
35

The AAA-ATPase NVL2 is a component of pre-ribosomal particles that interacts with the DExD/H-box RNA helicase DOB1.
Masami Nagahama, Takeshi Yamazoe, Yoshimitsu Hara, Katsuko Tani, Akihiko Tsuji, Mitsuo Tagaya. Biochem Biophys Res Commun 2006
25
35

The Exosome Is Recruited to RNA Substrates through Specific Adaptor Proteins.
Matthias Thoms, Emma Thomson, Jochen Baßler, Marén Gnädig, Sabine Griesel, Ed Hurt. Cell 2015
112
35


A Puzzle of Life: Crafting Ribosomal Subunits.
Dieter Kressler, Ed Hurt, Jochen Baßler. Trends Biochem Sci 2017
85
28

Interaction profiling identifies the human nuclear exosome targeting complex.
Michal Lubas, Marianne S Christensen, Maiken S Kristiansen, Michal Domanski, Lasse G Falkenby, Søren Lykke-Andersen, Jens S Andersen, Andrzej Dziembowski, Torben Heick Jensen. Mol Cell 2011
260
28

The regulation and functions of the nuclear RNA exosome complex.
Cornelia Kilchert, Sina Wittmann, Lidia Vasiljeva. Nat Rev Mol Cell Biol 2016
183
28

Identification of a Nuclear Exosome Decay Pathway for Processed Transcripts.
Nicola Meola, Michal Domanski, Evdoxia Karadoulama, Yun Chen, Coline Gentil, Dennis Pultz, Kristoffer Vitting-Seerup, Søren Lykke-Andersen, Jens S Andersen, Albin Sandelin,[...]. Mol Cell 2016
116
28

Mechanism of eIF6 release from the nascent 60S ribosomal subunit.
Félix Weis, Emmanuel Giudice, Mark Churcher, Li Jin, Christine Hilcenko, Chi C Wong, David Traynor, Robert R Kay, Alan J Warren. Nat Struct Mol Biol 2015
105
21

Chemotherapeutic drugs inhibit ribosome biogenesis at various levels.
Kaspar Burger, Bastian Mühl, Thomas Harasim, Michaela Rohrmoser, Anastassia Malamoussi, Mathias Orban, Markus Kellner, Anita Gruber-Eber, Elisabeth Kremmer, Michael Hölzel,[...]. J Biol Chem 2010
250
21


The power of AAA-ATPases on the road of pre-60S ribosome maturation--molecular machines that strip pre-ribosomal particles.
Dieter Kressler, Ed Hurt, Helmut Bergler, Jochen Bassler. Biochim Biophys Acta 2012
59
21

Ribosomopathies: how a common root can cause a tree of pathologies.
Nadia Danilova, Hanna T Gazda. Dis Model Mech 2015
98
21


A new yeast poly(A) polymerase complex involved in RNA quality control.
Stepánka Vanácová, Jeannette Wolf, Georges Martin, Diana Blank, Sabine Dettwiler, Arno Friedlein, Hanno Langen, Gérard Keith, Walter Keller. PLoS Biol 2005
453
21

The human nuclear exosome targeting complex is loaded onto newly synthesized RNA to direct early ribonucleolysis.
Michal Lubas, Peter Refsing Andersen, Aleks Schein, Andrzej Dziembowski, Grzegorz Kudla, Torben Heick Jensen. Cell Rep 2015
105
21

RNA degradation by the exosome is promoted by a nuclear polyadenylation complex.
John LaCava, Jonathan Houseley, Cosmin Saveanu, Elisabeth Petfalski, Elizabeth Thompson, Alain Jacquier, David Tollervey. Cell 2005
669
21


Cryptic pol II transcripts are degraded by a nuclear quality control pathway involving a new poly(A) polymerase.
Françoise Wyers, Mathieu Rougemaille, Gwenaël Badis, Jean-Claude Rousselle, Marie-Elisabeth Dufour, Jocelyne Boulay, Béatrice Régnault, Frédéric Devaux, Abdelkader Namane, Bertrand Séraphin,[...]. Cell 2005
653
21

Interaction properties of human TRAMP-like proteins and their role in pre-rRNA 5'ETS turnover.
Haruka Sudo, Aya Nozaki, Hideaki Uno, Yo-Ichi Ishida, Masami Nagahama. FEBS Lett 2016
22
21

Rlp24 activates the AAA-ATPase Drg1 to initiate cytoplasmic pre-60S maturation.
Lisa Kappel, Mathias Loibl, Gertrude Zisser, Isabella Klein, Gernot Fruhmann, Christof Gruber, Stefan Unterweger, Gerald Rechberger, Brigitte Pertschy, Helmut Bergler. J Cell Biol 2012
42
21

Structure of the nuclear exosome captured on a maturing preribosome.
Jan Michael Schuller, Sebastian Falk, Lisa Fromm, Ed Hurt, Elena Conti. Science 2018
47
21

The AAA-ATPase Rea1 drives removal of biogenesis factors during multiple stages of 60S ribosome assembly.
Jochen Bassler, Martina Kallas, Brigitte Pertschy, Cornelia Ulbrich, Matthias Thoms, Ed Hurt. Mol Cell 2010
79
21

Mechanochemical removal of ribosome biogenesis factors from nascent 60S ribosomal subunits.
Cornelia Ulbrich, Meikel Diepholz, Jochen Bassler, Dieter Kressler, Brigitte Pertschy, Kyriaki Galani, Bettina Böttcher, Ed Hurt. Cell 2009
103
21

Transcriptomic signature of cell lines isolated from canine mammary adenocarcinoma metastases to lungs.
M Król, J Polańska, K M Pawłowski, P Turowski, J Skierski, A Majewska, M Ugorski, R E Morty, T Motyl. J Appl Genet 2010
37
21

Wdr74 is required for blastocyst formation in the mouse.
Marc Maserati, Melanie Walentuk, Xiangpeng Dai, Olivia Holston, Danielle Adams, Jesse Mager. PLoS One 2011
17
21

Structure and function of the N-terminal nucleolin binding domain of nuclear valosin-containing protein-like 2 (NVL2) harboring a nucleolar localization signal.
Yoshie Fujiwara, Ken-ichiro Fujiwara, Natsuko Goda, Naoko Iwaya, Takeshi Tenno, Masahiro Shirakawa, Hidekazu Hiroaki. J Biol Chem 2011
12
25

NVL2 is a nucleolar AAA-ATPase that interacts with ribosomal protein L5 through its nucleolar localization sequence.
Masami Nagahama, Yoshimitsu Hara, Akihiro Seki, Takeshi Yamazoe, Yumiko Kawate, Takashi Shinohara, Kiyotaka Hatsuzawa, Katsuko Tani, Mitsuo Tagaya. Mol Biol Cell 2004
33
21

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
21

Ribosomopathies: human disorders of ribosome dysfunction.
Anupama Narla, Benjamin L Ebert. Blood 2010
491
14

Maturation of mammalian H/ACA box snoRNAs: PAPD5-dependent adenylation and PARN-dependent trimming.
Heike Berndt, Christiane Harnisch, Christiane Rammelt, Nadine Stöhr, Anne Zirkel, Juliane C Dohm, Heinz Himmelbauer, Joao-Paulo Tavanez, Stefan Hüttelmaier, Elmar Wahle. RNA 2012
106
14

Prevention of the neurocristopathy Treacher Collins syndrome through inhibition of p53 function.
Natalie C Jones, Megan L Lynn, Karin Gaudenz, Daisuke Sakai, Kazushi Aoto, Jean-Phillipe Rey, Earl F Glynn, Lacey Ellington, Chunying Du, Jill Dixon,[...]. Nat Med 2008
283
14

An overview of pre-ribosomal RNA processing in eukaryotes.
Anthony K Henras, Célia Plisson-Chastang, Marie-Françoise O'Donohue, Anirban Chakraborty, Pierre-Emmanuel Gleizes. Wiley Interdiscip Rev RNA 2015
290
14

Ribosomopathies: Global process, tissue specific defects.
Pamela C Yelick, Paul A Trainor. Rare Dis 2015
55
14

A p53-dependent mechanism underlies macrocytic anemia in a mouse model of human 5q- syndrome.
Jillian L Barlow, Lesley F Drynan, Duncan R Hewett, Luke R Holmes, Silvia Lorenzo-Abalde, Alison L Lane, Helen E Jolin, Richard Pannell, Angela J Middleton, See Heng Wong,[...]. Nat Med 2010
249
14

An ARF-independent c-MYC-activated tumor suppression pathway mediated by ribosomal protein-Mdm2 Interaction.
Everardo Macias, Aiwen Jin, Chad Deisenroth, Krishna Bhat, Hua Mao, Mikael S Lindström, Yanping Zhang. Cancer Cell 2010
149
14

The 5S RNP couples p53 homeostasis to ribosome biogenesis and nucleolar stress.
Katherine E Sloan, Markus T Bohnsack, Nicholas J Watkins. Cell Rep 2013
165
14

Functions of ribosomal proteins in assembly of eukaryotic ribosomes in vivo.
Jesus de la Cruz, Katrin Karbstein, John L Woolford. Annu Rev Biochem 2015
175
14

Ribosome biogenesis and cancer.
Massimo Derenzini, Lorenzo Montanaro, Davide Trerè. Acta Histochem 2017
61
14

The ATPase Fap7 Tests the Ability to Carry Out Translocation-like Conformational Changes and Releases Dim1 during 40S Ribosome Maturation.
Homa Ghalei, Juliette Trepreau, Jason C Collins, Hari Bhaskaran, Bethany S Strunk, Katrin Karbstein. Mol Cell 2017
23
14

Dis3-like 1: a novel exoribonuclease associated with the human exosome.
Raymond H J Staals, Alfred W Bronkhorst, Geurt Schilders, Shimyn Slomovic, Gadi Schuster, Albert J R Heck, Reinout Raijmakers, Ger J M Pruijn. EMBO J 2010
98
14

An Mtr4/ZFC3H1 complex facilitates turnover of unstable nuclear RNAs to prevent their cytoplasmic transport and global translational repression.
Koichi Ogami, Patricia Richard, Yaqiong Chen, Mainul Hoque, Wencheng Li, James J Moresco, John R Yates, Bin Tian, James L Manley. Genes Dev 2017
50
14

The human core exosome interacts with differentially localized processive RNases: hDIS3 and hDIS3L.
Rafal Tomecki, Maiken S Kristiansen, Søren Lykke-Andersen, Aleksander Chlebowski, Katja M Larsen, Roman J Szczesny, Karolina Drazkowska, Agnieszka Pastula, Jens S Andersen, Piotr P Stepien,[...]. EMBO J 2010
168
14

Threading the barrel of the RNA exosome.
Claudia Schneider, David Tollervey. Trends Biochem Sci 2013
82
14

Mpp6 Incorporation in the Nuclear Exosome Contributes to RNA Channeling through the Mtr4 Helicase.
Sebastian Falk, Fabien Bonneau, Judith Ebert, Alexander Kögel, Elena Conti. Cell Rep 2017
26
14


RNA degradation paths in a 12-subunit nuclear exosome complex.
Debora Lika Makino, Benjamin Schuch, Elisabeth Stegmann, Marc Baumgärtner, Claire Basquin, Elena Conti. Nature 2015
89
14

Air1 zinc knuckles 4 and 5 and a conserved IWRXY motif are critical for the function and integrity of the Trf4/5-Air1/2-Mtr4 polyadenylation (TRAMP) RNA quality control complex.
Milo B Fasken, Sara W Leung, Ayan Banerjee, Maja O Kodani, Ramiro Chavez, Elizabeth A Bowman, Meghan K Purohit, Max E Rubinson, Emily H Rubinson, Anita H Corbett. J Biol Chem 2011
50
14



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.