A citation-based method for searching scientific literature

Klaus H Maier-Hein, Peter F Neher, Jean-Christophe Houde, Marc-Alexandre Côté, Eleftherios Garyfallidis, Jidan Zhong, Maxime Chamberland, Fang-Cheng Yeh, Ying-Chia Lin, Qing Ji, Wilburn E Reddick, John O Glass, David Qixiang Chen, Yuanjing Feng, Chengfeng Gao, Ye Wu, Jieyan Ma, Renjie He, Qiang Li, Carl-Fredrik Westin, Samuel Deslauriers-Gauthier, J Omar Ocegueda González, Michael Paquette, Samuel St-Jean, Gabriel Girard, François Rheault, Jasmeen Sidhu, Chantal M W Tax, Fenghua Guo, Hamed Y Mesri, Szabolcs Dávid, Martijn Froeling, Anneriet M Heemskerk, Alexander Leemans, Arnaud Boré, Basile Pinsard, Christophe Bedetti, Matthieu Desrosiers, Simona Brambati, Julien Doyon, Alessia Sarica, Roberta Vasta, Antonio Cerasa, Aldo Quattrone, Jason Yeatman, Ali R Khan, Wes Hodges, Simon Alexander, David Romascano, Muhamed Barakovic, Anna Auría, Oscar Esteban, Alia Lemkaddem, Jean-Philippe Thiran, H Ertan Cetingul, Benjamin L Odry, Boris Mailhe, Mariappan S Nadar, Fabrizio Pizzagalli, Gautam Prasad, Julio E Villalon-Reina, Justin Galvis, Paul M Thompson, Francisco De Santiago Requejo, Pedro Luque Laguna, Luis Miguel Lacerda, Rachel Barrett, Flavio Dell'Acqua, Marco Catani, Laurent Petit, Emmanuel Caruyer, Alessandro Daducci, Tim B Dyrby, Tim Holland-Letz, Claus C Hilgetag, Bram Stieltjes, Maxime Descoteaux. Nat Commun 2017
Times Cited: 509







List of co-cited articles
1090 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


MRtrix3: A fast, flexible and open software framework for medical image processing and visualisation.
J-Donald Tournier, Robert Smith, David Raffelt, Rami Tabbara, Thijs Dhollander, Maximilian Pietsch, Daan Christiaens, Ben Jeurissen, Chun-Hung Yeh, Alan Connelly. Neuroimage 2019
499
28

Anatomical accuracy of brain connections derived from diffusion MRI tractography is inherently limited.
Cibu Thomas, Frank Q Ye, M Okan Irfanoglu, Pooja Modi, Kadharbatcha S Saleem, David A Leopold, Carlo Pierpaoli. Proc Natl Acad Sci U S A 2014
424
23

The WU-Minn Human Connectome Project: an overview.
David C Van Essen, Stephen M Smith, Deanna M Barch, Timothy E J Behrens, Essa Yacoub, Kamil Ugurbil. Neuroimage 2013
22

Multi-tissue constrained spherical deconvolution for improved analysis of multi-shell diffusion MRI data.
Ben Jeurissen, Jacques-Donald Tournier, Thijs Dhollander, Alan Connelly, Jan Sijbers. Neuroimage 2014
478
21




FSL.
Mark Jenkinson, Christian F Beckmann, Timothy E J Behrens, Mark W Woolrich, Stephen M Smith. Neuroimage 2012
19

An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest.
Rahul S Desikan, Florent Ségonne, Bruce Fischl, Brian T Quinn, Bradford C Dickerson, Deborah Blacker, Randy L Buckner, Anders M Dale, R Paul Maguire, Bradley T Hyman,[...]. Neuroimage 2006
18

The minimal preprocessing pipelines for the Human Connectome Project.
Matthew F Glasser, Stamatios N Sotiropoulos, J Anthony Wilson, Timothy S Coalson, Bruce Fischl, Jesper L Andersson, Junqian Xu, Saad Jbabdi, Matthew Webster, Jonathan R Polimeni,[...]. Neuroimage 2013
18

Anatomically-constrained tractography: improved diffusion MRI streamlines tractography through effective use of anatomical information.
Robert E Smith, Jacques-Donald Tournier, Fernando Calamante, Alan Connelly. Neuroimage 2012
434
18

Characterization and propagation of uncertainty in diffusion-weighted MR imaging.
T E J Behrens, M W Woolrich, M Jenkinson, H Johansen-Berg, R G Nunes, S Clare, P M Matthews, J M Brady, S M Smith. Magn Reson Med 2003
18


FreeSurfer.
Bruce Fischl. Neuroimage 2012
16

Diffusion MRI fiber tractography of the brain.
Ben Jeurissen, Maxime Descoteaux, Susumu Mori, Alexander Leemans. NMR Biomed 2019
149
15

Investigating the prevalence of complex fiber configurations in white matter tissue with diffusion magnetic resonance imaging.
Ben Jeurissen, Alexander Leemans, Jacques-Donald Tournier, Derek K Jones, Jan Sijbers. Hum Brain Mapp 2013
574
15

Limits to anatomical accuracy of diffusion tractography using modern approaches.
Kurt G Schilling, Vishwesh Nath, Colin Hansen, Prasanna Parvathaneni, Justin Blaber, Yurui Gao, Peter Neher, Dogu Baran Aydogan, Yonggang Shi, Mario Ocampo-Pineda,[...]. Neuroimage 2019
95
15


SIFT: Spherical-deconvolution informed filtering of tractograms.
Robert E Smith, Jacques-Donald Tournier, Fernando Calamante, Alan Connelly. Neuroimage 2013
325
14

Superficial white matter fiber systems impede detection of long-range cortical connections in diffusion MR tractography.
Colin Reveley, Anil K Seth, Carlo Pierpaoli, Afonso C Silva, David Yu, Richard C Saunders, David A Leopold, Frank Q Ye. Proc Natl Acad Sci U S A 2015
234
14

Probabilistic diffusion tractography with multiple fibre orientations: What can we gain?
T E J Behrens, H Johansen Berg, S Jbabdi, M F S Rushworth, M W Woolrich. Neuroimage 2007
14

SIFT2: Enabling dense quantitative assessment of brain white matter connectivity using streamlines tractography.
Robert E Smith, Jacques-Donald Tournier, Fernando Calamante, Alan Connelly. Neuroimage 2015
198
13

Advances in diffusion MRI acquisition and processing in the Human Connectome Project.
Stamatios N Sotiropoulos, Saad Jbabdi, Junqian Xu, Jesper L Andersson, Steen Moeller, Edward J Auerbach, Matthew F Glasser, Moises Hernandez, Guillermo Sapiro, Mark Jenkinson,[...]. Neuroimage 2013
488
13

NODDI: practical in vivo neurite orientation dispersion and density imaging of the human brain.
Hui Zhang, Torben Schneider, Claudia A Wheeler-Kingshott, Daniel C Alexander. Neuroimage 2012
13

Virtual in vivo interactive dissection of white matter fasciculi in the human brain.
Marco Catani, Robert J Howard, Sinisa Pajevic, Derek K Jones. Neuroimage 2002
13

Direct estimation of the fiber orientation density function from diffusion-weighted MRI data using spherical deconvolution.
J-Donald Tournier, Fernando Calamante, David G Gadian, Alan Connelly. Neuroimage 2004
924
13

COMMIT: Convex optimization modeling for microstructure informed tractography.
Alessandro Daducci, Alessandro Dal Palù, Alia Lemkaddem, Jean-Philippe Thiran. IEEE Trans Med Imaging 2015
118
12

The Human Connectome Project: a data acquisition perspective.
D C Van Essen, K Ugurbil, E Auerbach, D Barch, T E J Behrens, R Bucholz, A Chang, L Chen, M Corbetta, S W Curtiss,[...]. Neuroimage 2012
942
12


Advances in functional and structural MR image analysis and implementation as FSL.
Stephen M Smith, Mark Jenkinson, Mark W Woolrich, Christian F Beckmann, Timothy E J Behrens, Heidi Johansen-Berg, Peter R Bannister, Marilena De Luca, Ivana Drobnjak, David E Flitney,[...]. Neuroimage 2004
11

Denoising of diffusion MRI using random matrix theory.
Jelle Veraart, Dmitry S Novikov, Daan Christiaens, Benjamin Ades-Aron, Jan Sijbers, Els Fieremans. Neuroimage 2016
531
11

Population-averaged atlas of the macroscale human structural connectome and its network topology.
Fang-Cheng Yeh, Sandip Panesar, David Fernandes, Antonio Meola, Masanori Yoshino, Juan C Fernandez-Miranda, Jean M Vettel, Timothy Verstynen. Neuroimage 2018
159
11

Using Diffusion Tractography to Predict Cortical Connection Strength and Distance: A Quantitative Comparison with Tracers in the Monkey.
Chad J Donahue, Stamatios N Sotiropoulos, Saad Jbabdi, Moises Hernandez-Fernandez, Timothy E Behrens, Tim B Dyrby, Timothy Coalson, Henry Kennedy, Kenneth Knoblauch, David C Van Essen,[...]. J Neurosci 2016
184
11

Towards quantitative connectivity analysis: reducing tractography biases.
Gabriel Girard, Kevin Whittingstall, Rachid Deriche, Maxime Descoteaux. Neuroimage 2014
145
10

Tractography: where do we go from here?
Saad Jbabdi, Heidi Johansen-Berg. Brain Connect 2011
367
10

Reproducibility of quantitative tractography methods applied to cerebral white matter.
Setsu Wakana, Arvind Caprihan, Martina M Panzenboeck, James H Fallon, Michele Perry, Randy L Gollub, Kegang Hua, Jiangyang Zhang, Hangyi Jiang, Prachi Dubey,[...]. Neuroimage 2007
10

Generalized q-sampling imaging.
Fang-Cheng Yeh, Van Jay Wedeen, Wen-Yih Isaac Tseng. IEEE Trans Med Imaging 2010
450
10

Recognition of white matter bundles using local and global streamline-based registration and clustering.
Eleftherios Garyfallidis, Marc-Alexandre Côté, Francois Rheault, Jasmeen Sidhu, Janice Hau, Laurent Petit, David Fortin, Stephen Cunanne, Maxime Descoteaux. Neuroimage 2018
81
12

Deterministic diffusion fiber tracking improved by quantitative anisotropy.
Fang-Cheng Yeh, Timothy D Verstynen, Yibao Wang, Juan C Fernández-Miranda, Wen-Yih Isaac Tseng. PLoS One 2013
488
10

MR diffusion tensor spectroscopy and imaging.
P J Basser, J Mattiello, D LeBihan. Biophys J 1994
10

A multi-modal parcellation of human cerebral cortex.
Matthew F Glasser, Timothy S Coalson, Emma C Robinson, Carl D Hacker, John Harwell, Essa Yacoub, Kamil Ugurbil, Jesper Andersson, Christian F Beckmann, Mark Jenkinson,[...]. Nature 2016
9

Estimation of the effective self-diffusion tensor from the NMR spin echo.
P J Basser, J Mattiello, D LeBihan. J Magn Reson B 1994
9

The human connectome: A structural description of the human brain.
Olaf Sporns, Giulio Tononi, Rolf Kötter. PLoS Comput Biol 2005
9

Q-ball imaging.
David S Tuch. Magn Reson Med 2004
9

Predicting human resting-state functional connectivity from structural connectivity.
C J Honey, O Sporns, L Cammoun, X Gigandet, J P Thiran, R Meuli, P Hagmann. Proc Natl Acad Sci U S A 2009
9

TractSeg - Fast and accurate white matter tract segmentation.
Jakob Wasserthal, Peter Neher, Klaus H Maier-Hein. Neuroimage 2018
115
9

Dipy, a library for the analysis of diffusion MRI data.
Eleftherios Garyfallidis, Matthew Brett, Bagrat Amirbekian, Ariel Rokem, Stefan van der Walt, Maxime Descoteaux, Ian Nimmo-Smith. Front Neuroinform 2014
387
9

N4ITK: improved N3 bias correction.
Nicholas J Tustison, Brian B Avants, Philip A Cook, Yuanjie Zheng, Alexander Egan, Paul A Yushkevich, James C Gee. IEEE Trans Med Imaging 2010
9




Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.