A citation-based method for searching scientific literature

Xin Liu, Yu Chen, Carol A Fierke. J Am Chem Soc 2017
Times Cited: 9







List of co-cited articles
61 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Structure of a bacterial ribonuclease P holoenzyme in complex with tRNA.
Nicholas J Reiter, Amy Osterman, Alfredo Torres-Larios, Kerren K Swinger, Tao Pan, Alfonso Mondragón. Nature 2010
189
55

Structural studies of RNase P.
Alfonso Mondragón. Annu Rev Biophys 2013
46
44

The P4 metal binding site in RNase P RNA affects active site metal affinity through substrate positioning.
Eric L Christian, Kari M J Smith, Nicholas Perera, Michael E Harris. RNA 2006
36
44

Evidence that substrate-specific effects of C5 protein lead to uniformity in binding and catalysis by RNase P.
Lei Sun, Frank E Campbell, Nathan H Zahler, Michael E Harris. EMBO J 2006
62
44

Crystal structure of a bacterial ribonuclease P RNA.
Alexei V Kazantsev, Angelika A Krivenko, Daniel J Harrington, Stephen R Holbrook, Paul D Adams, Norman R Pace. Proc Natl Acad Sci U S A 2005
155
44



The Diversity of Ribonuclease P: Protein and RNA Catalysts with Analogous Biological Functions.
Bradley P Klemm, Nancy Wu, Yu Chen, Xin Liu, Kipchumba J Kaitany, Michael J Howard, Carol A Fierke. Biomolecules 2016
31
33

Basis for structural diversity in homologous RNAs.
Andrey S Krasilnikov, Yinghua Xiao, Tao Pan, Alfonso Mondragón. Science 2004
104
33

Protein component of the ribozyme ribonuclease P alters substrate recognition by directly contacting precursor tRNA.
S Niranjanakumari, T Stams, S M Crary, D W Christianson, C A Fierke. Proc Natl Acad Sci U S A 1998
140
33

Crystal structure of the specificity domain of ribonuclease P.
Andrey S Krasilnikov, Xiaojing Yang, Tao Pan, Alfonso Mondragón. Nature 2003
173
33

Bacterial RNase P: a new view of an ancient enzyme.
Alexei V Kazantsev, Norman R Pace. Nat Rev Microbiol 2006
136
33

Crystal structure of the RNA component of bacterial ribonuclease P.
Alfredo Torres-Larios, Kerren K Swinger, Andrey S Krasilnikov, Tao Pan, Alfonso Mondragón. Nature 2005
158
33

The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme.
C Guerrier-Takada, K Gardiner, T Marsh, N Pace, S Altman. Cell 1983
33

A general two-metal-ion mechanism for catalytic RNA.
T A Steitz, J A Steitz. Proc Natl Acad Sci U S A 1993
875
33




Ribonuclease P: the evolution of an ancient RNA enzyme.
Scott C Walker, David R Engelke. Crit Rev Biochem Mol Biol 2006
137
33

MotionCor2: anisotropic correction of beam-induced motion for improved cryo-electron microscopy.
Shawn Q Zheng, Eugene Palovcak, Jean-Paul Armache, Kliment A Verba, Yifan Cheng, David A Agard. Nat Methods 2017
33

A divalent cation stabilizes the active conformation of the B. subtilis RNase P x pre-tRNA complex: a role for an inner-sphere metal ion in RNase P.
John Hsieh, Kristin S Koutmou, David Rueda, Markos Koutmos, Nils G Walter, Carol A Fierke. J Mol Biol 2010
23
33

EMAN2: an extensible image processing suite for electron microscopy.
Guang Tang, Liwei Peng, Philip R Baldwin, Deepinder S Mann, Wen Jiang, Ian Rees, Steven J Ludtke. J Struct Biol 2007
33

Of proteins and RNA: the RNase P/MRP family.
Olga Esakova, Andrey S Krasilnikov. RNA 2010
153
33


Active Yeast Telomerase Shares Subunits with Ribonucleoproteins RNase P and RNase MRP.
Bruno Lemieux, Nancy Laterreur, Anna Perederina, Jean-François Noël, Marie-Line Dubois, Andrey S Krasilnikov, Raymund J Wellinger. Cell 2016
52
22

3' processing of eukaryotic precursor tRNAs.
Richard J Maraia, Tek N Lamichhane. Wiley Interdiscip Rev RNA 2011
76
22

PHENIX: a comprehensive Python-based system for macromolecular structure solution.
Paul D Adams, Pavel V Afonine, Gábor Bunkóczi, Vincent B Chen, Ian W Davis, Nathaniel Echols, Jeffrey J Headd, Li-Wei Hung, Gary J Kapral, Ralf W Grosse-Kunstleve,[...]. Acta Crystallogr D Biol Crystallogr 2010
22

UCSF Chimera--a visualization system for exploratory research and analysis.
Eric F Pettersen, Thomas D Goddard, Conrad C Huang, Gregory S Couch, Daniel M Greenblatt, Elaine C Meng, Thomas E Ferrin. J Comput Chem 2004
22

Dissecting functional cooperation among protein subunits in archaeal RNase P, a catalytic ribonucleoprotein complex.
Wen-Yi Chen, Dileep K Pulukkunat, I-Ming Cho, Hsin-Yue Tsai, Venkat Gopalan. Nucleic Acids Res 2010
37
22


Modular architecture of eukaryotic RNase P and RNase MRP revealed by electron microscopy.
Katharina Hipp, Kyriaki Galani, Claire Batisse, Simone Prinz, Bettina Böttcher. Nucleic Acids Res 2012
20
22



The enigma of ribonuclease P evolution.
Enno Hartmann, Roland K Hartmann. Trends Genet 2003
102
22

Crystal structure of a self-spliced group II intron.
Navtej Toor, Kevin S Keating, Sean D Taylor, Anna Marie Pyle. Science 2008
338
22

Functional reconstitution and characterization of Pyrococcus furiosus RNase P.
Hsin-Yue Tsai, Dileep K Pulukkunat, Walter K Woznick, Venkat Gopalan. Proc Natl Acad Sci U S A 2006
71
22

Quantifying the local resolution of cryo-EM density maps.
Alp Kucukelbir, Fred J Sigworth, Hemant D Tagare. Nat Methods 2014
22

Structure of ribonuclease P--a universal ribozyme.
Alfredo Torres-Larios, Kerren K Swinger, Tao Pan, Alfonso Mondragón. Curr Opin Struct Biol 2006
56
22

Accelerated cryo-EM structure determination with parallelisation using GPUs in RELION-2.
Dari Kimanius, Björn O Forsberg, Sjors Hw Scheres, Erik Lindahl. Elife 2016
620
22

Characterization of the archaeal ribonuclease P proteins from Pyrococcus horikoshii OT3.
Atsushi Terada, Takashi Honda, Hideo Fukuhara, Kazumasa Hada, Makoto Kimura. J Biochem 2006
19
22





Mapping metal-binding sites in the catalytic domain of bacterial RNase P RNA.
Alexei V Kazantsev, Angelika A Krivenko, Norman R Pace. RNA 2009
37
22

MolProbity: all-atom contacts and structure validation for proteins and nucleic acids.
Ian W Davis, Andrew Leaver-Fay, Vincent B Chen, Jeremy N Block, Gary J Kapral, Xueyi Wang, Laura W Murray, W Bryan Arendall, Jack Snoeyink, Jane S Richardson,[...]. Nucleic Acids Res 2007
22

Pre-tRNA turnover catalyzed by the yeast nuclear RNase P holoenzyme is limited by product release.
John Hsieh, Scott C Walker, Carol A Fierke, David R Engelke. RNA 2009
24
22

Reconstitution of archaeal ribonuclease P from RNA and four protein components.
Yoshiaki Kouzuma, Masashi Mizoguchi, Hisanori Takagi, Hideo Fukuhara, Masayo Tsukamoto, Tomoyuki Numata, Makoto Kimura. Biochem Biophys Res Commun 2003
70
22

Nucleic acid catalysis: metals, nucleobases, and other cofactors.
W Luke Ward, Kory Plakos, Victoria J DeRose. Chem Rev 2014
99
22

The structural basis of ribosome activity in peptide bond synthesis.
P Nissen, J Hansen, N Ban, P B Moore, T A Steitz. Science 2000
22


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.