A citation-based method for searching scientific literature

Nicole M Gaudelli, Alexis C Komor, Holly A Rees, Michael S Packer, Ahmed H Badran, David I Bryson, David R Liu. Nature 2017
Times Cited: 1380







List of co-cited articles
1097 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage.
Alexis C Komor, Yongjoo B Kim, Michael S Packer, John A Zuris, David R Liu. Nature 2016
77

Search-and-replace genome editing without double-strand breaks or donor DNA.
Andrew V Anzalone, Peyton B Randolph, Jessie R Davis, Alexander A Sousa, Luke W Koblan, Jonathan M Levy, Peter J Chen, Christopher Wilson, Gregory A Newby, Aditya Raguram,[...]. Nature 2019
54

A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity.
Martin Jinek, Krzysztof Chylinski, Ines Fonfara, Michael Hauer, Jennifer A Doudna, Emmanuelle Charpentier. Science 2012
40

Multiplex genome engineering using CRISPR/Cas systems.
Le Cong, F Ann Ran, David Cox, Shuailiang Lin, Robert Barretto, Naomi Habib, Patrick D Hsu, Xuebing Wu, Wenyan Jiang, Luciano A Marraffini,[...]. Science 2013
26

Genome editing with CRISPR-Cas nucleases, base editors, transposases and prime editors.
Andrew V Anzalone, Luke W Koblan, David R Liu. Nat Biotechnol 2020
437
26


Targeted nucleotide editing using hybrid prokaryotic and vertebrate adaptive immune systems.
Keiji Nishida, Takayuki Arazoe, Nozomu Yachie, Satomi Banno, Mika Kakimoto, Mayura Tabata, Masao Mochizuki, Aya Miyabe, Michihiro Araki, Kiyotaka Y Hara,[...]. Science 2016
606
21

Phage-assisted evolution of an adenine base editor with improved Cas domain compatibility and activity.
Michelle F Richter, Kevin T Zhao, Elliot Eton, Audrone Lapinaite, Gregory A Newby, Benjamin W Thuronyi, Christopher Wilson, Luke W Koblan, Jing Zeng, Daniel E Bauer,[...]. Nat Biotechnol 2020
157
21

RNA-guided human genome engineering via Cas9.
Prashant Mali, Luhan Yang, Kevin M Esvelt, John Aach, Marc Guell, James E DiCarlo, Julie E Norville, George M Church. Science 2013
20

Improving cytidine and adenine base editors by expression optimization and ancestral reconstruction.
Luke W Koblan, Jordan L Doman, Christopher Wilson, Jonathan M Levy, Tristan Tay, Gregory A Newby, Juan Pablo Maianti, Aditya Raguram, David R Liu. Nat Biotechnol 2018
308
18


Evolved Cas9 variants with broad PAM compatibility and high DNA specificity.
Johnny H Hu, Shannon M Miller, Maarten H Geurts, Weixin Tang, Liwei Chen, Ning Sun, Christina M Zeina, Xue Gao, Holly A Rees, Zhi Lin,[...]. Nature 2018
708
17

In vivo genome editing using Staphylococcus aureus Cas9.
F Ann Ran, Le Cong, Winston X Yan, David A Scott, Jonathan S Gootenberg, Andrea J Kriz, Bernd Zetsche, Ophir Shalem, Xuebing Wu, Kira S Makarova,[...]. Nature 2015
17

Directed evolution of adenine base editors with increased activity and therapeutic application.
Nicole M Gaudelli, Dieter K Lam, Holly A Rees, Noris M Solá-Esteves, Luis A Barrera, David A Born, Aaron Edwards, Jason M Gehrke, Seung-Joo Lee, Alexander J Liquori,[...]. Nat Biotechnol 2020
119
17

High-fidelity CRISPR-Cas9 nucleases with no detectable genome-wide off-target effects.
Benjamin P Kleinstiver, Vikram Pattanayak, Michelle S Prew, Shengdar Q Tsai, Nhu T Nguyen, Zongli Zheng, J Keith Joung. Nature 2016
16

Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR-Cas system.
Bernd Zetsche, Jonathan S Gootenberg, Omar O Abudayyeh, Ian M Slaymaker, Kira S Makarova, Patrick Essletzbichler, Sara E Volz, Julia Joung, John van der Oost, Aviv Regev,[...]. Cell 2015
16

Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression.
Lei S Qi, Matthew H Larson, Luke A Gilbert, Jennifer A Doudna, Jonathan S Weissman, Adam P Arkin, Wendell A Lim. Cell 2013
15

Cytosine base editor generates substantial off-target single-nucleotide variants in mouse embryos.
Erwei Zuo, Yidi Sun, Wu Wei, Tanglong Yuan, Wenqin Ying, Hao Sun, Liyun Yuan, Lars M Steinmetz, Yixue Li, Hui Yang. Science 2019
349
15

CRISPR C-to-G base editors for inducing targeted DNA transversions in human cells.
Ibrahim C Kurt, Ronghao Zhou, Sowmya Iyer, Sara P Garcia, Bret R Miller, Lukas M Langner, Julian Grünewald, J Keith Joung. Nat Biotechnol 2021
114
14

Increasing the genome-targeting scope and precision of base editing with engineered Cas9-cytidine deaminase fusions.
Y Bill Kim, Alexis C Komor, Jonathan M Levy, Michael S Packer, Kevin T Zhao, David R Liu. Nat Biotechnol 2017
389
13

Glycosylase base editors enable C-to-A and C-to-G base changes.
Dongdong Zhao, Ju Li, Siwei Li, Xiuqing Xin, Muzi Hu, Marcus A Price, Susan J Rosser, Changhao Bi, Xueli Zhang. Nat Biotechnol 2021
97
13

Improved base excision repair inhibition and bacteriophage Mu Gam protein yields C:G-to-T:A base editors with higher efficiency and product purity.
Alexis C Komor, Kevin T Zhao, Michael S Packer, Nicole M Gaudelli, Amanda L Waterbury, Luke W Koblan, Y Bill Kim, Ahmed H Badran, David R Liu. Sci Adv 2017
324
13

Genome-Scale CRISPR-Mediated Control of Gene Repression and Activation.
Luke A Gilbert, Max A Horlbeck, Britt Adamson, Jacqueline E Villalta, Yuwen Chen, Evan H Whitehead, Carla Guimaraes, Barbara Panning, Hidde L Ploegh, Michael C Bassik,[...]. Cell 2014
12

CRISPR-mediated modular RNA-guided regulation of transcription in eukaryotes.
Luke A Gilbert, Matthew H Larson, Leonardo Morsut, Zairan Liu, Gloria A Brar, Sandra E Torres, Noam Stern-Ginossar, Onn Brandman, Evan H Whitehead, Jennifer A Doudna,[...]. Cell 2013
12

DNA targeting specificity of RNA-guided Cas9 nucleases.
Patrick D Hsu, David A Scott, Joshua A Weinstein, F Ann Ran, Silvana Konermann, Vineeta Agarwala, Yinqing Li, Eli J Fine, Xuebing Wu, Ophir Shalem,[...]. Nat Biotechnol 2013
12

Rationally engineered Cas9 nucleases with improved specificity.
Ian M Slaymaker, Linyi Gao, Bernd Zetsche, David A Scott, Winston X Yan, Feng Zhang. Science 2016
12

CRISPR DNA base editors with reduced RNA off-target and self-editing activities.
Julian Grünewald, Ronghao Zhou, Sowmya Iyer, Caleb A Lareau, Sara P Garcia, Martin J Aryee, J Keith Joung. Nat Biotechnol 2019
128
12

Off-target RNA mutation induced by DNA base editing and its elimination by mutagenesis.
Changyang Zhou, Yidi Sun, Rui Yan, Yajing Liu, Erwei Zuo, Chan Gu, Linxiao Han, Yu Wei, Xinde Hu, Rong Zeng,[...]. Nature 2019
187
12

Engineered CRISPR-Cas9 nuclease with expanded targeting space.
Hiroshi Nishimasu, Xi Shi, Soh Ishiguro, Linyi Gao, Seiichi Hirano, Sae Okazaki, Taichi Noda, Omar O Abudayyeh, Jonathan S Gootenberg, Hideto Mori,[...]. Science 2018
415
12

Enhanced prime editing systems by manipulating cellular determinants of editing outcomes.
Peter J Chen, Jeffrey A Hussmann, Jun Yan, Friederike Knipping, Purnima Ravisankar, Pin-Fang Chen, Cidi Chen, James W Nelson, Gregory A Newby, Mustafa Sahin,[...]. Cell 2021
37
32

Unconstrained genome targeting with near-PAMless engineered CRISPR-Cas9 variants.
Russell T Walton, Kathleen A Christie, Madelynn N Whittaker, Benjamin P Kleinstiver. Science 2020
277
12

Enhanced proofreading governs CRISPR-Cas9 targeting accuracy.
Janice S Chen, Yavuz S Dagdas, Benjamin P Kleinstiver, Moira M Welch, Alexander A Sousa, Lucas B Harrington, Samuel H Sternberg, J Keith Joung, Ahmet Yildiz, Jennifer A Doudna. Nature 2017
548
11

Engineered CRISPR-Cas9 nucleases with altered PAM specificities.
Benjamin P Kleinstiver, Michelle S Prew, Shengdar Q Tsai, Ved V Topkar, Nhu T Nguyen, Zongli Zheng, Andrew P W Gonzales, Zhuyun Li, Randall T Peterson, Jing-Ruey Joanna Yeh,[...]. Nature 2015
894
11

Targeted base editing in rice and tomato using a CRISPR-Cas9 cytidine deaminase fusion.
Zenpei Shimatani, Sachiko Kashojiya, Mariko Takayama, Rie Terada, Takayuki Arazoe, Hisaki Ishii, Hiroshi Teramura, Tsuyoshi Yamamoto, Hiroki Komatsu, Kenji Miura,[...]. Nat Biotechnol 2017
313
11

Prime genome editing in rice and wheat.
Qiupeng Lin, Yuan Zong, Chenxiao Xue, Shengxing Wang, Shuai Jin, Zixu Zhu, Yanpeng Wang, Andrew V Anzalone, Aditya Raguram, Jordan L Doman,[...]. Nat Biotechnol 2020
210
11

In vivo base editing rescues Hutchinson-Gilford progeria syndrome in mice.
Luke W Koblan, Michael R Erdos, Christopher Wilson, Wayne A Cabral, Jonathan M Levy, Zheng-Mei Xiong, Urraca L Tavarez, Lindsay M Davison, Yantenew G Gete, Xiaojing Mao,[...]. Nature 2021
84
13

Cytosine, but not adenine, base editors induce genome-wide off-target mutations in rice.
Shuai Jin, Yuan Zong, Qiang Gao, Zixu Zhu, Yanpeng Wang, Peng Qin, Chengzhi Liang, Daowen Wang, Jin-Long Qiu, Feng Zhang,[...]. Science 2019
279
11

CRISPR-Cas9 In Vivo Gene Editing for Transthyretin Amyloidosis.
Julian D Gillmore, Ed Gane, Jorg Taubel, Justin Kao, Marianna Fontana, Michael L Maitland, Jessica Seitzer, Daniel O'Connell, Kathryn R Walsh, Kristy Wood,[...]. N Engl J Med 2021
177
11

RNA editing with CRISPR-Cas13.
David B T Cox, Jonathan S Gootenberg, Omar O Abudayyeh, Brian Franklin, Max J Kellner, Julia Joung, Feng Zhang. Science 2017
669
10

CRISPR-STOP: gene silencing through base-editing-induced nonsense mutations.
Cem Kuscu, Mahmut Parlak, Turan Tufan, Jiekun Yang, Karol Szlachta, Xiaolong Wei, Rashad Mammadov, Mazhar Adli. Nat Methods 2017
173
10

CRISPR-engineered T cells in patients with refractory cancer.
Edward A Stadtmauer, Joseph A Fraietta, Megan M Davis, Adam D Cohen, Kristy L Weber, Eric Lancaster, Patricia A Mangan, Irina Kulikovskaya, Minnal Gupta, Fang Chen,[...]. Science 2020
450
10


Transcriptome-wide off-target RNA editing induced by CRISPR-guided DNA base editors.
Julian Grünewald, Ronghao Zhou, Sara P Garcia, Sowmya Iyer, Caleb A Lareau, Martin J Aryee, J Keith Joung. Nature 2019
247
10

Targeted AID-mediated mutagenesis (TAM) enables efficient genomic diversification in mammalian cells.
Yunqing Ma, Jiayuan Zhang, Weijie Yin, Zhenchao Zhang, Yan Song, Xing Chang. Nat Methods 2016
230
10

Analysis and minimization of cellular RNA editing by DNA adenine base editors.
Holly A Rees, Christopher Wilson, Jordan L Doman, David R Liu. Sci Adv 2019
109
10

An APOBEC3A-Cas9 base editor with minimized bystander and off-target activities.
Jason M Gehrke, Oliver Cervantes, M Kendell Clement, Yuxuan Wu, Jing Zeng, Daniel E Bauer, Luca Pinello, J Keith Joung. Nat Biotechnol 2018
192
10

CRISPResso2 provides accurate and rapid genome editing sequence analysis.
Kendell Clement, Holly Rees, Matthew C Canver, Jason M Gehrke, Rick Farouni, Jonathan Y Hsu, Mitchel A Cole, David R Liu, J Keith Joung, Daniel E Bauer,[...]. Nat Biotechnol 2019
291
10

A dual-deaminase CRISPR base editor enables concurrent adenine and cytosine editing.
Julian Grünewald, Ronghao Zhou, Caleb A Lareau, Sara P Garcia, Sowmya Iyer, Bret R Miller, Lukas M Langner, Jonathan Y Hsu, Martin J Aryee, J Keith Joung. Nat Biotechnol 2020
76
13

Efficient generation of mouse models with the prime editing system.
Yao Liu, Xiangyang Li, Siting He, Shuhong Huang, Chao Li, Yulin Chen, Zhen Liu, Xingxu Huang, Xiaolong Wang. Cell Discov 2020
52
17

Cas9-crRNA ribonucleoprotein complex mediates specific DNA cleavage for adaptive immunity in bacteria.
Giedrius Gasiunas, Rodolphe Barrangou, Philippe Horvath, Virginijus Siksnys. Proc Natl Acad Sci U S A 2012
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.