A citation-based method for searching scientific literature

Levi G Lowder, Jianping Zhou, Yingxiao Zhang, Aimee Malzahn, Zhaohui Zhong, Tzung-Fu Hsieh, Daniel F Voytas, Yong Zhang, Yiping Qi. Mol Plant 2018
Times Cited: 101







List of co-cited articles
1382 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A CRISPR/Cas9 Toolbox for Multiplexed Plant Genome Editing and Transcriptional Regulation.
Levi G Lowder, Dengwei Zhang, Nicholas J Baltes, Joseph W Paul, Xu Tang, Xuelian Zheng, Daniel F Voytas, Tzung-Fu Hsieh, Yong Zhang, Yiping Qi. Plant Physiol 2015
312
59

A potent Cas9-derived gene activator for plant and mammalian cells.
Zhenxiang Li, Dandan Zhang, Xiangyu Xiong, Bingyu Yan, Wei Xie, Jen Sheen, Jian-Feng Li. Nat Plants 2017
105
48

A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity.
Martin Jinek, Krzysztof Chylinski, Ines Fonfara, Michael Hauer, Jennifer A Doudna, Emmanuelle Charpentier. Science 2012
45

Genome-scale transcriptional activation by an engineered CRISPR-Cas9 complex.
Silvana Konermann, Mark D Brigham, Alexandro E Trevino, Julia Joung, Omar O Abudayyeh, Clea Barcena, Patrick D Hsu, Naomi Habib, Jonathan S Gootenberg, Hiroshi Nishimasu,[...]. Nature 2015
40

RNA-guided transcriptional regulation in planta via synthetic dCas9-based transcription factors.
Agnieszka Piatek, Zahir Ali, Hatoon Baazim, Lixin Li, Aala Abulfaraj, Sahar Al-Shareef, Mustapha Aouida, Magdy M Mahfouz. Plant Biotechnol J 2015
194
40

Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR-Cas system.
Bernd Zetsche, Jonathan S Gootenberg, Omar O Abudayyeh, Ian M Slaymaker, Kira S Makarova, Patrick Essletzbichler, Sara E Volz, Julia Joung, John van der Oost, Aviv Regev,[...]. Cell 2015
40

Site-specific manipulation of Arabidopsis loci using CRISPR-Cas9 SunTag systems.
Ashot Papikian, Wanlu Liu, Javier Gallego-Bartolomé, Steven E Jacobsen. Nat Commun 2019
126
40

A CRISPR-Cpf1 system for efficient genome editing and transcriptional repression in plants.
Xu Tang, Levi G Lowder, Tao Zhang, Aimee A Malzahn, Xuelian Zheng, Daniel F Voytas, Zhaohui Zhong, Yiyi Chen, Qiurong Ren, Qian Li,[...]. Nat Plants 2017
262
39

Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage.
Alexis C Komor, Yongjoo B Kim, Michael S Packer, John A Zuris, David R Liu. Nature 2016
33

Boosting CRISPR/Cas9 multiplex editing capability with the endogenous tRNA-processing system.
Kabin Xie, Bastian Minkenberg, Yinong Yang. Proc Natl Acad Sci U S A 2015
639
32

Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression.
Lei S Qi, Matthew H Larson, Luke A Gilbert, Jennifer A Doudna, Jonathan S Weissman, Adam P Arkin, Wendell A Lim. Cell 2013
29

Targeted DNA demethylation of the Arabidopsis genome using the human TET1 catalytic domain.
Javier Gallego-Bartolomé, Jason Gardiner, Wanlu Liu, Ashot Papikian, Basudev Ghoshal, Hsuan Yu Kuo, Jenny Miao-Chi Zhao, David J Segal, Steven E Jacobsen. Proc Natl Acad Sci U S A 2018
117
28

A protein-tagging system for signal amplification in gene expression and fluorescence imaging.
Marvin E Tanenbaum, Luke A Gilbert, Lei S Qi, Jonathan S Weissman, Ronald D Vale. Cell 2014
825
26

RNA targeting with CRISPR-Cas13.
Omar O Abudayyeh, Jonathan S Gootenberg, Patrick Essletzbichler, Shuo Han, Julia Joung, Joseph J Belanto, Vanessa Verdine, David B T Cox, Max J Kellner, Aviv Regev,[...]. Nature 2017
878
26

Highly efficient Cas9-mediated transcriptional programming.
Alejandro Chavez, Jonathan Scheiman, Suhani Vora, Benjamin W Pruitt, Marcelle Tuttle, Eswar P R Iyer, Shuailiang Lin, Samira Kiani, Christopher D Guzman, Daniel J Wiegand,[...]. Nat Methods 2015
838
25

Precise base editing in rice, wheat and maize with a Cas9-cytidine deaminase fusion.
Yuan Zong, Yanpeng Wang, Chao Li, Rui Zhang, Kunling Chen, Yidong Ran, Jin-Long Qiu, Daowen Wang, Caixia Gao. Nat Biotechnol 2017
398
25

CRISPR-mediated modular RNA-guided regulation of transcription in eukaryotes.
Luke A Gilbert, Matthew H Larson, Leonardo Morsut, Zairan Liu, Gloria A Brar, Sandra E Torres, Noam Stern-Ginossar, Onn Brandman, Evan H Whitehead, Jennifer A Doudna,[...]. Cell 2013
25

Programmable base editing of A•T to G•C in genomic DNA without DNA cleavage.
Nicole M Gaudelli, Alexis C Komor, Holly A Rees, Michael S Packer, Ahmed H Badran, David I Bryson, David R Liu. Nature 2017
24

A Multipurpose Toolkit to Enable Advanced Genome Engineering in Plants.
Tomáš Čermák, Shaun J Curtin, Javier Gil-Humanes, Radim Čegan, Thomas J Y Kono, Eva Konečná, Joseph J Belanto, Colby G Starker, Jade W Mathre, Rebecca L Greenstein,[...]. Plant Cell 2017
268
23

DNA-free genome editing in plants with preassembled CRISPR-Cas9 ribonucleoproteins.
Je Wook Woo, Jungeun Kim, Soon Il Kwon, Claudia Corvalán, Seung Woo Cho, Hyeran Kim, Sang-Gyu Kim, Sang-Tae Kim, Sunghwa Choe, Jin-Soo Kim. Nat Biotechnol 2015
517
23

Simultaneous editing of three homoeoalleles in hexaploid bread wheat confers heritable resistance to powdery mildew.
Yanpeng Wang, Xi Cheng, Qiwei Shan, Yi Zhang, Jinxing Liu, Caixia Gao, Jin-Long Qiu. Nat Biotechnol 2014
807
22

Multiplex genome engineering using CRISPR/Cas systems.
Le Cong, F Ann Ran, David Cox, Shuailiang Lin, Robert Barretto, Naomi Habib, Patrick D Hsu, Xuebing Wu, Wenyan Jiang, Luciano A Marraffini,[...]. Science 2013
22

CRISPR/Cas Genome Editing and Precision Plant Breeding in Agriculture.
Kunling Chen, Yanpeng Wang, Rui Zhang, Huawei Zhang, Caixia Gao. Annu Rev Plant Biol 2019
429
22

Engineering Quantitative Trait Variation for Crop Improvement by Genome Editing.
Daniel Rodríguez-Leal, Zachary H Lemmon, Jarrett Man, Madelaine E Bartlett, Zachary B Lippman. Cell 2017
400
21

Multiplex and homologous recombination-mediated genome editing in Arabidopsis and Nicotiana benthamiana using guide RNA and Cas9.
Jian-Feng Li, Julie E Norville, John Aach, Matthew McCormack, Dandan Zhang, Jenifer Bush, George M Church, Jen Sheen. Nat Biotechnol 2013
767
21

Targeted base editing in rice and tomato using a CRISPR-Cas9 cytidine deaminase fusion.
Zenpei Shimatani, Sachiko Kashojiya, Mariko Takayama, Rie Terada, Takayuki Arazoe, Hisaki Ishii, Hiroshi Teramura, Tsuyoshi Yamamoto, Hiroki Komatsu, Kenji Miura,[...]. Nat Biotechnol 2017
349
21

A CRISPR/Cas9 toolkit for multiplex genome editing in plants.
Hui-Li Xing, Li Dong, Zhi-Ping Wang, Hai-Yan Zhang, Chun-Yan Han, Bing Liu, Xue-Chen Wang, Qi-Jun Chen. BMC Plant Biol 2014
656
21

A modular toolbox for gRNA-Cas9 genome engineering in plants based on the GoldenBraid standard.
Marta Vazquez-Vilar, Joan Miquel Bernabé-Orts, Asun Fernandez-Del-Carmen, Pello Ziarsolo, Jose Blanca, Antonio Granell, Diego Orzaez. Plant Methods 2016
82
25

Targeted genome modification of crop plants using a CRISPR-Cas system.
Qiwei Shan, Yanpeng Wang, Jun Li, Yi Zhang, Kunling Chen, Zhen Liang, Kang Zhang, Jinxing Liu, Jianzhong Jeff Xi, Jin-Long Qiu,[...]. Nat Biotechnol 2013
947
20

Strong gene activation in plants with genome-wide specificity using a new orthogonal CRISPR/Cas9-based programmable transcriptional activator.
Sara Selma, Joan Miquel Bernabé-Orts, Marta Vazquez-Vilar, Borja Diego-Martin, Maria Ajenjo, Victor Garcia-Carpintero, Antonio Granell, Diego Orzaez. Plant Biotechnol J 2019
38
52

Search-and-replace genome editing without double-strand breaks or donor DNA.
Andrew V Anzalone, Peyton B Randolph, Jessie R Davis, Alexander A Sousa, Luke W Koblan, Jonathan M Levy, Peter J Chen, Christopher Wilson, Gregory A Newby, Aditya Raguram,[...]. Nature 2019
20

Multiplex Gene Editing in Rice Using the CRISPR-Cpf1 System.
Mugui Wang, Yanfei Mao, Yuming Lu, Xiaoping Tao, Jian-Kang Zhu. Mol Plant 2017
156
19

A Robust CRISPR/Cas9 System for Convenient, High-Efficiency Multiplex Genome Editing in Monocot and Dicot Plants.
Xingliang Ma, Qunyu Zhang, Qinlong Zhu, Wei Liu, Yan Chen, Rong Qiu, Bin Wang, Zhongfang Yang, Heying Li, Yuru Lin,[...]. Mol Plant 2015
947
19

A large-scale whole-genome sequencing analysis reveals highly specific genome editing by both Cas9 and Cpf1 (Cas12a) nucleases in rice.
Xu Tang, Guanqing Liu, Jianping Zhou, Qiurong Ren, Qi You, Li Tian, Xuhui Xin, Zhaohui Zhong, Binglin Liu, Xuelian Zheng,[...]. Genome Biol 2018
131
19

Expanded base editing in rice and wheat using a Cas9-adenosine deaminase fusion.
Chao Li, Yuan Zong, Yanpeng Wang, Shuai Jin, Dingbo Zhang, Qianna Song, Rui Zhang, Caixia Gao. Genome Biol 2018
203
19

Efficient DNA-free genome editing of bread wheat using CRISPR/Cas9 ribonucleoprotein complexes.
Zhen Liang, Kunling Chen, Tingdong Li, Yi Zhang, Yanpeng Wang, Qian Zhao, Jinxing Liu, Huawei Zhang, Cuimin Liu, Yidong Ran,[...]. Nat Commun 2017
379
19

Plant Genome Editing Using FnCpf1 and LbCpf1 Nucleases at Redefined and Altered PAM Sites.
Zhaohui Zhong, Yingxiao Zhang, Qi You, Xu Tang, Qiurong Ren, Shishi Liu, Lijia Yang, Yan Wang, Xiaopei Liu, Binglin Liu,[...]. Mol Plant 2018
74
24

A Single Transcript CRISPR-Cas9 System for Efficient Genome Editing in Plants.
Xu Tang, Xuelian Zheng, Yiping Qi, Dengwei Zhang, Yan Cheng, Aiting Tang, Daniel F Voytas, Yong Zhang. Mol Plant 2016
87
20

Engineering complex synthetic transcriptional programs with CRISPR RNA scaffolds.
Jesse G Zalatan, Michael E Lee, Ricardo Almeida, Luke A Gilbert, Evan H Whitehead, Marie La Russa, Jordan C Tsai, Jonathan S Weissman, John E Dueber, Lei S Qi,[...]. Cell 2015
597
18

CRISPR/Cpf1-mediated DNA-free plant genome editing.
Hyeran Kim, Sang-Tae Kim, Jahee Ryu, Beum-Chang Kang, Jin-Soo Kim, Sang-Gyu Kim. Nat Commun 2017
235
18

RNA virus interference via CRISPR/Cas13a system in plants.
Rashid Aman, Zahir Ali, Haroon Butt, Ahmed Mahas, Fatimah Aljedaani, Muhammad Zuhaib Khan, Shouwei Ding, Magdy Mahfouz. Genome Biol 2018
237
17

High-frequency, precise modification of the tomato genome.
Tomáš Čermák, Nicholas J Baltes, Radim Čegan, Yong Zhang, Daniel F Voytas. Genome Biol 2015
278
17

The emerging and uncultivated potential of CRISPR technology in plant science.
Yingxiao Zhang, Aimee A Malzahn, Simon Sretenovic, Yiping Qi. Nat Plants 2019
154
17

DNA replicons for plant genome engineering.
Nicholas J Baltes, Javier Gil-Humanes, Tomas Cermak, Paul A Atkins, Daniel F Voytas. Plant Cell 2014
269
16

Epigenome editing by a CRISPR-Cas9-based acetyltransferase activates genes from promoters and enhancers.
Isaac B Hilton, Anthony M D'Ippolito, Christopher M Vockley, Pratiksha I Thakore, Gregory E Crawford, Timothy E Reddy, Charles A Gersbach. Nat Biotechnol 2015
16

Highly Efficient A·T to G·C Base Editing by Cas9n-Guided tRNA Adenosine Deaminase in Rice.
Fang Yan, Yongjie Kuang, Bin Ren, Jingwen Wang, Dawei Zhang, Honghui Lin, Bing Yang, Xueping Zhou, Huanbin Zhou. Mol Plant 2018
104
16

Engineering Herbicide-Resistant Rice Plants through CRISPR/Cas9-Mediated Homologous Recombination of Acetolactate Synthase.
Yongwei Sun, Xin Zhang, Chuanyin Wu, Yubing He, Youzhi Ma, Han Hou, Xiuping Guo, Wenming Du, Yunde Zhao, Lanqin Xia. Mol Plant 2016
199
16

Efficient and transgene-free genome editing in wheat through transient expression of CRISPR/Cas9 DNA or RNA.
Yi Zhang, Zhen Liang, Yuan Zong, Yanpeng Wang, Jinxing Liu, Kunling Chen, Jin-Long Qiu, Caixia Gao. Nat Commun 2016
390
16

RNA-guided transcriptional activation via CRISPR/dCas9 mimics overexpression phenotypes in Arabidopsis.
Jong-Jin Park, Emma Dempewolf, Wenzheng Zhang, Zeng-Yu Wang. PLoS One 2017
30
53

Engineered CRISPR-Cas9 nuclease with expanded targeting space.
Hiroshi Nishimasu, Xi Shi, Soh Ishiguro, Linyi Gao, Seiichi Hirano, Sae Okazaki, Taichi Noda, Omar O Abudayyeh, Jonathan S Gootenberg, Hideto Mori,[...]. Science 2018
487
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.