A citation-based method for searching scientific literature

Michael A Lodato, Rachel E Rodin, Craig L Bohrson, Michael E Coulter, Alison R Barton, Minseok Kwon, Maxwell A Sherman, Carl M Vitzthum, Lovelace J Luquette, Chandri N Yandava, Pengwei Yang, Thomas W Chittenden, Nicole E Hatem, Steven C Ryu, Mollie B Woodworth, Peter J Park, Christopher A Walsh. Science 2018
Times Cited: 228







List of co-cited articles
1039 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Somatic mutant clones colonize the human esophagus with age.
Iñigo Martincorena, Joanna C Fowler, Agnieszka Wabik, Andrew R J Lawson, Federico Abascal, Michael W J Hall, Alex Cagan, Kasumi Murai, Krishnaa Mahbubani, Michael R Stratton,[...]. Science 2018
404
30

Somatic mutation in single human neurons tracks developmental and transcriptional history.
Michael A Lodato, Mollie B Woodworth, Semin Lee, Gilad D Evrony, Bhaven K Mehta, Amir Karger, Soohyun Lee, Thomas W Chittenden, Alissa M D'Gama, Xuyu Cai,[...]. Science 2015
303
28

Tissue-specific mutation accumulation in human adult stem cells during life.
Francis Blokzijl, Joep de Ligt, Myrthe Jager, Valentina Sasselli, Sophie Roerink, Nobuo Sasaki, Meritxell Huch, Sander Boymans, Ewart Kuijk, Pjotr Prins,[...]. Nature 2016
460
27

Tumor evolution. High burden and pervasive positive selection of somatic mutations in normal human skin.
Iñigo Martincorena, Amit Roshan, Moritz Gerstung, Peter Ellis, Peter Van Loo, Stuart McLaren, David C Wedge, Anthony Fullam, Ludmil B Alexandrov, Jose M Tubio,[...]. Science 2015
848
25

Different mutational rates and mechanisms in human cells at pregastrulation and neurogenesis.
Taejeong Bae, Livia Tomasini, Jessica Mariani, Bo Zhou, Tanmoy Roychowdhury, Daniel Franjic, Mihovil Pletikos, Reenal Pattni, Bo-Juen Chen, Elisa Venturini,[...]. Science 2018
117
24

The landscape of somatic mutation in normal colorectal epithelial cells.
Henry Lee-Six, Sigurgeir Olafsson, Peter Ellis, Robert J Osborne, Mathijs A Sanders, Luiza Moore, Nikitas Georgakopoulos, Franco Torrente, Ayesha Noorani, Martin Goddard,[...]. Nature 2019
193
20

Population dynamics of normal human blood inferred from somatic mutations.
Henry Lee-Six, Nina Friesgaard Øbro, Mairi S Shepherd, Sebastian Grossmann, Kevin Dawson, Miriam Belmonte, Robert J Osborne, Brian J P Huntly, Inigo Martincorena, Elizabeth Anderson,[...]. Nature 2018
213
19

The repertoire of mutational signatures in human cancer.
Ludmil B Alexandrov, Jaegil Kim, Nicholas J Haradhvala, Mi Ni Huang, Alvin Wei Tian Ng, Yang Wu, Arnoud Boot, Kyle R Covington, Dmitry A Gordenin, Erik N Bergstrom,[...]. Nature 2020
740
19

The hallmarks of aging.
Carlos López-Otín, Maria A Blasco, Linda Partridge, Manuel Serrano, Guido Kroemer. Cell 2013
18

Age-related clonal hematopoiesis associated with adverse outcomes.
Siddhartha Jaiswal, Pierre Fontanillas, Jason Flannick, Alisa Manning, Peter V Grauman, Brenton G Mar, R Coleman Lindsley, Craig H Mermel, Noel Burtt, Alejandro Chavez,[...]. N Engl J Med 2014
17

Signatures of mutational processes in human cancer.
Ludmil B Alexandrov, Serena Nik-Zainal, David C Wedge, Samuel A J R Aparicio, Sam Behjati, Andrew V Biankin, Graham R Bignell, Niccolò Bolli, Ake Borg, Anne-Lise Børresen-Dale,[...]. Nature 2013
17

Tobacco smoking and somatic mutations in human bronchial epithelium.
Kenichi Yoshida, Kate H C Gowers, Henry Lee-Six, Deepak P Chandrasekharan, Tim Coorens, Elizabeth F Maughan, Kathryn Beal, Andrew Menzies, Fraser R Millar, Elizabeth Anderson,[...]. Nature 2020
128
17

Single-cell whole-genome sequencing reveals the functional landscape of somatic mutations in B lymphocytes across the human lifespan.
Lei Zhang, Xiao Dong, Moonsook Lee, Alexander Y Maslov, Tao Wang, Jan Vijg. Proc Natl Acad Sci U S A 2019
88
18

RNA sequence analysis reveals macroscopic somatic clonal expansion across normal tissues.
Keren Yizhak, François Aguet, Jaegil Kim, Julian M Hess, Kirsten Kübler, Jonna Grimsby, Ruslana Frazer, Hailei Zhang, Nicholas J Haradhvala, Daniel Rosebrock,[...]. Science 2019
212
15

Clonal hematopoiesis and blood-cancer risk inferred from blood DNA sequence.
Giulio Genovese, Anna K Kähler, Robert E Handsaker, Johan Lindberg, Samuel A Rose, Samuel F Bakhoum, Kimberly Chambert, Eran Mick, Benjamin M Neale, Menachem Fromer,[...]. N Engl J Med 2014
15

Somatic mutations and clonal dynamics in healthy and cirrhotic human liver.
Simon F Brunner, Nicola D Roberts, Luke A Wylie, Luiza Moore, Sarah J Aitken, Susan E Davies, Mathijs A Sanders, Pete Ellis, Chris Alder, Yvette Hooks,[...]. Nature 2019
108
15

Accurate identification of single-nucleotide variants in whole-genome-amplified single cells.
Xiao Dong, Lei Zhang, Brandon Milholland, Moonsook Lee, Alexander Y Maslov, Tao Wang, Jan Vijg. Nat Methods 2017
92
16

The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data.
Aaron McKenna, Matthew Hanna, Eric Banks, Andrey Sivachenko, Kristian Cibulskis, Andrew Kernytsky, Kiran Garimella, David Altshuler, Stacey Gabriel, Mark Daly,[...]. Genome Res 2010
15

Universal Patterns of Selection in Cancer and Somatic Tissues.
Iñigo Martincorena, Keiran M Raine, Moritz Gerstung, Kevin J Dawson, Kerstin Haase, Peter Van Loo, Helen Davies, Michael R Stratton, Peter J Campbell. Cell 2017
468
14

The mutational landscape of normal human endometrial epithelium.
Luiza Moore, Daniel Leongamornlert, Tim H H Coorens, Mathijs A Sanders, Peter Ellis, Stefan C Dentro, Kevin J Dawson, Tim Butler, Raheleh Rahbari, Thomas J Mitchell,[...]. Nature 2020
127
14

Extensive heterogeneity in somatic mutation and selection in the human bladder.
Andrew R J Lawson, Federico Abascal, Tim H H Coorens, Yvette Hooks, Laura O'Neill, Calli Latimer, Keiran Raine, Mathijs A Sanders, Anne Y Warren, Krishnaa T A Mahbubani,[...]. Science 2020
57
24

Somatic mutation landscapes at single-molecule resolution.
Federico Abascal, Luke M R Harvey, Emily Mitchell, Andrew R J Lawson, Stefanie V Lensing, Peter Ellis, Andrew J C Russell, Raul E Alcantara, Adrian Baez-Ortega, Yichen Wang,[...]. Nature 2021
46
30

Somatic mutagenesis in satellite cells associates with human skeletal muscle aging.
Irene Franco, Anna Johansson, Karl Olsson, Peter Vrtačnik, Pär Lundin, Hafdis T Helgadottir, Malin Larsson, Gwladys Revêchon, Carla Bosia, Andrea Pagnani,[...]. Nat Commun 2018
53
24

Age-related remodelling of oesophageal epithelia by mutated cancer drivers.
Akira Yokoyama, Nobuyuki Kakiuchi, Tetsuichi Yoshizato, Yasuhito Nannya, Hiromichi Suzuki, Yasuhide Takeuchi, Yusuke Shiozawa, Yusuke Sato, Kosuke Aoki, Soo Ki Kim,[...]. Nature 2019
239
13

Mosaic copy number variation in human neurons.
Michael J McConnell, Michael R Lindberg, Kristen J Brennand, Julia C Piper, Thierry Voet, Chris Cowing-Zitron, Svetlana Shumilina, Roger S Lasken, Joris R Vermeesch, Ira M Hall,[...]. Science 2013
335
13

Genome-wide quantification of rare somatic mutations in normal human tissues using massively parallel sequencing.
Margaret L Hoang, Isaac Kinde, Cristian Tomasetti, K Wyatt McMahon, Thomas A Rosenquist, Arthur P Grollman, Kenneth W Kinzler, Bert Vogelstein, Nickolas Papadopoulos. Proc Natl Acad Sci U S A 2016
97
13

Somatic Evolution in Non-neoplastic IBD-Affected Colon.
Sigurgeir Olafsson, Rebecca E McIntyre, Tim Coorens, Timothy Butler, Hyunchul Jung, Philip S Robinson, Henry Lee-Six, Mathijs A Sanders, Kenneth Arestang, Claire Dawson,[...]. Cell 2020
49
26

Somatic mutations reveal asymmetric cellular dynamics in the early human embryo.
Young Seok Ju, Inigo Martincorena, Moritz Gerstung, Mia Petljak, Ludmil B Alexandrov, Raheleh Rahbari, David C Wedge, Helen R Davies, Manasa Ramakrishna, Anthony Fullam,[...]. Nature 2017
132
12

Clock-like mutational processes in human somatic cells.
Ludmil B Alexandrov, Philip H Jones, David C Wedge, Julian E Sale, Peter J Campbell, Serena Nik-Zainal, Michael R Stratton. Nat Genet 2015
461
12

A Compendium of Mutational Signatures of Environmental Agents.
Jill E Kucab, Xueqing Zou, Sandro Morganella, Madeleine Joel, A Scott Nanda, Eszter Nagy, Celine Gomez, Andrea Degasperi, Rebecca Harris, Stephen P Jackson,[...]. Cell 2019
195
12

Clonal hematopoiesis, with and without candidate driver mutations, is common in the elderly.
Florian Zink, Simon N Stacey, Gudmundur L Norddahl, Michael L Frigge, Olafur T Magnusson, Ingileif Jonsdottir, Thorgeir E Thorgeirsson, Asgeir Sigurdsson, Sigurjon A Gudjonsson, Julius Gudmundsson,[...]. Blood 2017
334
11

Genome sequencing of normal cells reveals developmental lineages and mutational processes.
Sam Behjati, Meritxell Huch, Ruben van Boxtel, Wouter Karthaus, David C Wedge, Asif U Tamuri, Inigo Martincorena, Mia Petljak, Ludmil B Alexandrov, Gunes Gundem,[...]. Nature 2014
210
11

Brain somatic mutations observed in Alzheimer's disease associated with aging and dysregulation of tau phosphorylation.
Jun Sung Park, Junehawk Lee, Eun Sun Jung, Myeong-Heui Kim, Il Bin Kim, Hyeonju Son, Sangwoo Kim, Sanghyeon Kim, Young Mok Park, Inhee Mook-Jung,[...]. Nat Commun 2019
53
20

The Sequence Alignment/Map format and SAMtools.
Heng Li, Bob Handsaker, Alec Wysoker, Tim Fennell, Jue Ruan, Nils Homer, Gabor Marth, Goncalo Abecasis, Richard Durbin. Bioinformatics 2009
11

Single-cell, genome-wide sequencing identifies clonal somatic copy-number variation in the human brain.
Xuyu Cai, Gilad D Evrony, Hillel S Lehmann, Princess C Elhosary, Bhaven K Mehta, Annapurna Poduri, Christopher A Walsh. Cell Rep 2014
165
10

Somatic mutation in cancer and normal cells.
Iñigo Martincorena, Peter J Campbell. Science 2015
509
10

Somatic mosaicism and neurodevelopmental disease.
Alissa M D'Gama, Christopher A Walsh. Nat Neurosci 2018
103
10


Somatic mutation, genomic variation, and neurological disease.
Annapurna Poduri, Gilad D Evrony, Xuyu Cai, Christopher A Walsh. Science 2013
342
9

Somatic Mutations Increase Hepatic Clonal Fitness and Regeneration in Chronic Liver Disease.
Min Zhu, Tianshi Lu, Yuemeng Jia, Xin Luo, Purva Gopal, Lin Li, Mobolaji Odewole, Veronica Renteria, Amit G Singal, Younghoon Jang,[...]. Cell 2019
93
9

Detectable clonal mosaicism from birth to old age and its relationship to cancer.
Cathy C Laurie, Cecelia A Laurie, Kenneth Rice, Kimberly F Doheny, Leila R Zelnick, Caitlin P McHugh, Hua Ling, Kurt N Hetrick, Elizabeth W Pugh, Chris Amos,[...]. Nat Genet 2012
373
9

Single-neuron sequencing analysis of L1 retrotransposition and somatic mutation in the human brain.
Gilad D Evrony, Xuyu Cai, Eunjung Lee, L Benjamin Hills, Princess C Elhosary, Hillel S Lehmann, J J Parker, Kutay D Atabay, Edward C Gilmore, Annapurna Poduri,[...]. Cell 2012
340
9

Single-cell whole-genome analyses by Linear Amplification via Transposon Insertion (LIANTI).
Chongyi Chen, Dong Xing, Longzhi Tan, Heng Li, Guangyu Zhou, Lei Huang, X Sunney Xie. Science 2017
161
9

Linked-read analysis identifies mutations in single-cell DNA-sequencing data.
Craig L Bohrson, Alison R Barton, Michael A Lodato, Rachel E Rodin, Lovelace J Luquette, Vinay V Viswanadham, Doga C Gulhan, Isidro Cortés-Ciriano, Maxwell A Sherman, Minseok Kwon,[...]. Nat Genet 2019
34
23

Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples.
Kristian Cibulskis, Michael S Lawrence, Scott L Carter, Andrey Sivachenko, David Jaffe, Carrie Sougnez, Stacey Gabriel, Matthew Meyerson, Eric S Lander, Gad Getz. Nat Biotechnol 2013
8

Intersection of diverse neuronal genomes and neuropsychiatric disease: The Brain Somatic Mosaicism Network.
Michael J McConnell, John V Moran, Alexej Abyzov, Schahram Akbarian, Taejeong Bae, Isidro Cortes-Ciriano, Jennifer A Erwin, Liana Fasching, Diane A Flasch, Donald Freed,[...]. Science 2017
137
8

The origin and evolution of mutations in acute myeloid leukemia.
John S Welch, Timothy J Ley, Daniel C Link, Christopher A Miller, David E Larson, Daniel C Koboldt, Lukas D Wartman, Tamara L Lamprecht, Fulu Liu, Jun Xia,[...]. Cell 2012
8


Single-cell genome sequencing: current state of the science.
Charles Gawad, Winston Koh, Stephen R Quake. Nat Rev Genet 2016
620
8

The mutational constraint spectrum quantified from variation in 141,456 humans.
Konrad J Karczewski, Laurent C Francioli, Grace Tiao, Beryl B Cummings, Jessica Alföldi, Qingbo Wang, Ryan L Collins, Kristen M Laricchia, Andrea Ganna, Daniel P Birnbaum,[...]. Nature 2020
8


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.