A citation-based method for searching scientific literature

Hehua Liu, Xiang Yu, Yiqing Chen, Jing Zhang, Baixing Wu, Lina Zheng, Phensinee Haruehanroengra, Rui Wang, Suhua Li, Jinzhong Lin, Jixi Li, Jia Sheng, Zhen Huang, Jinbiao Ma, Jianhua Gan. Nat Commun 2017
Times Cited: 80







List of co-cited articles
630 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A DNA enzyme that cleaves RNA.
R R Breaker, G F Joyce. Chem Biol 1994
763
51

A general purpose RNA-cleaving DNA enzyme.
S W Santoro, G F Joyce. Proc Natl Acad Sci U S A 1997
50


In vitro selection of a sodium-specific DNAzyme and its application in intracellular sensing.
Seyed-Fakhreddin Torabi, Peiwen Wu, Claire E McGhee, Lu Chen, Kevin Hwang, Nan Zheng, Jianjun Cheng, Yi Lu. Proc Natl Acad Sci U S A 2015
176
30

Discovery and Biosensing Applications of Diverse RNA-Cleaving DNAzymes.
Meng Liu, Dingran Chang, Yingfu Li. Acc Chem Res 2017
116
27


A lead-dependent DNAzyme with a two-step mechanism.
Andrea K Brown, Jing Li, Caroline M-B Pavot, Yi Lu. Biochemistry 2003
188
25

Metal Sensing by DNA.
Wenhu Zhou, Runjhun Saran, Juewen Liu. Chem Rev 2017
368
22

Functional nucleic acid sensors.
Juewen Liu, Zehui Cao, Yi Lu. Chem Rev 2009
22


A catalytic beacon sensor for uranium with parts-per-trillion sensitivity and millionfold selectivity.
Juewen Liu, Andrea K Brown, Xiangli Meng, Donald M Cropek, Jonathan D Istok, David B Watson, Yi Lu. Proc Natl Acad Sci U S A 2007
294
21


Crystal structure of a DNA catalyst.
Almudena Ponce-Salvatierra, Katarzyna Wawrzyniak-Turek, Ulrich Steuerwald, Claudia Höbartner, Vladimir Pena. Nature 2016
64
26


Dinucleotide junction cleavage versatility of 8-17 deoxyribozyme.
Rani P G Cruz, Johanna B Withers, Yingfu Li. Chem Biol 2004
139
18

Dissecting metal ion-dependent folding and catalysis of a single DNAzyme.
Hee-Kyung Kim, Ivan Rasnik, Juewen Liu, Taekjip Ha, Yi Lu. Nat Chem Biol 2007
88
17

Theranostic DNAzymes.
Wenhu Zhou, Jinsong Ding, Juewen Liu. Theranostics 2017
102
17

A DNA metalloenzyme with DNA ligase activity.
B Cuenoud, J W Szostak. Nature 1995
285
17

Nucleic acid catalysis: metals, nucleobases, and other cofactors.
W Luke Ward, Kory Plakos, Victoria J DeRose. Chem Rev 2014
106
16

A mutational analysis of the 8-17 deoxyribozyme core.
Alessio Peracchi, Maria Bonaccio, Marcello Clerici. J Mol Biol 2005
67
17


Small, highly active DNAs that hydrolyze DNA.
Hongzhou Gu, Kazuhiro Furukawa, Zasha Weinberg, Daniel F Berenson, Ronald R Breaker. J Am Chem Soc 2013
82
15

Evidence of a General Acid-Base Catalysis Mechanism in the 8-17 DNAzyme.
Marjorie Cepeda-Plaza, Claire E McGhee, Yi Lu. Biochemistry 2018
17
70

DNA-catalyzed sequence-specific hydrolysis of DNA.
Madhavaiah Chandra, Amit Sachdeva, Scott K Silverman. Nat Chem Biol 2009
108
15

Photocaged DNAzymes as a general method for sensing metal ions in living cells.
Kevin Hwang, Peiwen Wu, Taejin Kim, Lei Lei, Shiliang Tian, Yingxiao Wang, Yi Lu. Angew Chem Int Ed Engl 2014
97
13

DNAzyme-based biosensors and nanodevices.
Liang Gong, Zilong Zhao, Yi-Fan Lv, Shuang-Yan Huan, Ting Fu, Xiao-Bing Zhang, Guo-Li Shen, Ru-Qin Yu. Chem Commun (Camb) 2015
152
13

Ribozyme speed limits.
Gail Mitchell Emilsson, Shingo Nakamura, Adam Roth, Ronald R Breaker. RNA 2003
150
13

Activity, folding and Z-DNA formation of the 8-17 DNAzyme in the presence of monovalent ions.
Debapriya Mazumdar, Nandini Nagraj, Hee-Kyung Kim, Xiangli Meng, Andrea K Brown, Qian Sun, Wei Li, Yi Lu. J Am Chem Soc 2009
61
18

Metal-dependent global folding and activity of the 8-17 DNAzyme studied by fluorescence resonance energy transfer.
Hee-Kyung Kim, Juewen Liu, Jing Li, Nandini Nagraj, Mingxi Li, Caroline M-B Pavot, Yi Lu. J Am Chem Soc 2007
107
13

A Silver DNAzyme.
Runjhun Saran, Juewen Liu. Anal Chem 2016
102
13

Optical Control of Metal Ion Probes in Cells and Zebrafish Using Highly Selective DNAzymes Conjugated to Upconversion Nanoparticles.
Zhenglin Yang, Kang Yong Loh, Yueh-Te Chu, Ruopei Feng, Nitya Sai Reddy Satyavolu, Mengyi Xiong, Stephanie M Nakamata Huynh, Kevin Hwang, Lele Li, Hang Xing,[...]. J Am Chem Soc 2018
104
13

Mechanism and utility of an RNA-cleaving DNA enzyme.
S W Santoro, G F Joyce. Biochemistry 1998
326
13



A highly selective DNAzyme sensor for mercuric ions.
Marcel Hollenstein, Christopher Hipolito, Curtis Lam, David Dietrich, David M Perrin. Angew Chem Int Ed Engl 2008
218
12

Ultrasensitive DNAzyme beacon for lanthanides and metal speciation.
Po-Jung Jimmy Huang, Jenny Lin, Jing Cao, Mahsa Vazin, Juewen Liu. Anal Chem 2014
95
12

Biochemical and Biophysical Understanding of Metal Ion Selectivity of DNAzymes.
Kevin Hwang, Parisa Hosseinzadeh, Yi Lu. Inorganica Chim Acta 2016
54
18





Fluorogenic DNAzyme probes as bacterial indicators.
M Monsur Ali, Sergio D Aguirre, Hadeer Lazim, Yingfu Li. Angew Chem Int Ed Engl 2011
113
11

DNAzyme sensors for detection of metal ions in the environment and imaging them in living cells.
Claire E McGhee, Kang Yong Loh, Yi Lu. Curr Opin Biotechnol 2017
60
15

Pistol ribozyme adopts a pseudoknot fold facilitating site-specific in-line cleavage.
Aiming Ren, Nikola Vušurović, Jennifer Gebetsberger, Pu Gao, Michael Juen, Christoph Kreutz, Ronald Micura, Dinshaw J Patel. Nat Chem Biol 2016
52
17


An Exceptionally Selective DNA Cooperatively Binding Two Ca2+ Ions.
Wenhu Zhou, Runjhun Saran, Po-Jung Jimmy Huang, Jinsong Ding, Juewen Liu. Chembiochem 2017
41
21

Metal ion sensors based on DNAzymes and related DNA molecules.
Xiao-Bing Zhang, Rong-Mei Kong, Yi Lu. Annu Rev Anal Chem (Palo Alto Calif) 2011
216
11

A DNAzyme requiring two different metal ions at two distinct sites.
Wenhu Zhou, Yupei Zhang, Po-Jung Jimmy Huang, Jinsong Ding, Juewen Liu. Nucleic Acids Res 2016
63
14


DNAzyme-Mediated Assays for Amplified Detection of Nucleic Acids and Proteins.
Hanyong Peng, Ashley M Newbigging, Zhixin Wang, Jeffrey Tao, Wenchan Deng, X Chris Le, Hongquan Zhang. Anal Chem 2018
95
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.